RNA–Protein interactions for RNA: ENST00000619192.4

PMPCA-209, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-209ENST00000619192 NBPF14Q5TI25 921 aa28.45■■■□□ 2.14
PMPCA-209ENST00000619192 NFATC2IPQ8NCF5 419 aa28.45■■■□□ 2.14
PMPCA-209ENST00000619192 ASAP1Q9ULH1 1129 aa28.45■■■□□ 2.14
PMPCA-209ENST00000619192 QSER1Q2KHR3 1735 aa28.45■■■□□ 2.14
PMPCA-209ENST00000619192 CCDC184Q52MB2 194 aa28.42■■■□□ 2.14
PMPCA-209ENST00000619192 CCNL1Q9UK58 526 aaPredicted RBP28.42■■■□□ 2.14
PMPCA-209ENST00000619192 UBR2Q8IWV8 1755 aa28.42■■■□□ 2.14
PMPCA-209ENST00000619192 SRCAPQ6ZRS2 3230 aa28.41■■■□□ 2.14
PMPCA-209ENST00000619192 ADAMTS8Q9UP79 889 aa28.41■■■□□ 2.14
PMPCA-209ENST00000619192 CASZ1Q86V15 1759 aa28.4■■■□□ 2.14
PMPCA-209ENST00000619192 HMGB2P26583 209 aaKnown RBP28.4■■■□□ 2.14
PMPCA-209ENST00000619192 WDR43Q15061 677 aaKnown RBP eCLIP28.4■■■□□ 2.14
PMPCA-209ENST00000619192 NFE2L2Q16236 605 aa28.4■■■□□ 2.14
PMPCA-209ENST00000619192 SLC15A2Q16348 729 aa28.4■■■□□ 2.14
PMPCA-209ENST00000619192 AKT1S1Q96B36 256 aa28.4■■■□□ 2.14
PMPCA-209ENST00000619192 LOC102724428A0A0B4J2F2 783 aa28.39■■■□□ 2.14
PMPCA-209ENST00000619192 NEFMP07197 916 aa28.39■■■□□ 2.14
PMPCA-209ENST00000619192 SIK1P57059 783 aa28.39■■■□□ 2.14
PMPCA-209ENST00000619192 R3HDM1Q15032 1099 aaKnown RBP28.39■■■□□ 2.14
PMPCA-209ENST00000619192 MAPK8IP3Q9UPT6 1336 aa28.38■■■□□ 2.13
PMPCA-209ENST00000619192 KCPQ6ZWJ8 1503 aa28.38■■■□□ 2.13
PMPCA-209ENST00000619192 COL5A3P25940 1745 aaPredicted RBP28.38■■■□□ 2.13
PMPCA-209ENST00000619192 TUBGCP6Q96RT7 1819 aa28.37■■■□□ 2.13
PMPCA-209ENST00000619192 SLC4A9Q96Q91 983 aa28.37■■■□□ 2.13
PMPCA-209ENST00000619192 C4BP0C0L5 1744 aa28.36■■■□□ 2.13
PMPCA-209ENST00000619192 PSDA5PKW4 1024 aaPredicted RBP28.36■■■□□ 2.13
PMPCA-209ENST00000619192 KCNQ4P56696 695 aa28.36■■■□□ 2.13
PMPCA-209ENST00000619192 ZNF827Q17R98 1081 aa28.36■■■□□ 2.13
PMPCA-209ENST00000619192 STK32BQ9NY57 414 aa28.36■■■□□ 2.13
PMPCA-209ENST00000619192 PNISRQ8TF01 805 aaKnown RBP28.35■■■□□ 2.13
PMPCA-209ENST00000619192 RUNDC1Q96C34 613 aa28.35■■■□□ 2.13
PMPCA-209ENST00000619192 TJP1Q07157 1748 aa28.35■■■□□ 2.13
PMPCA-209ENST00000619192 TEFQ10587 303 aa28.33■■■□□ 2.13
PMPCA-209ENST00000619192 ITPK1Q13572 414 aa28.32■■■□□ 2.12
PMPCA-209ENST00000619192 RTF1Q92541 710 aaKnown RBP28.32■■■□□ 2.12
PMPCA-209ENST00000619192 TMPOP42166 694 aaKnown RBP28.31■■■□□ 2.12
PMPCA-209ENST00000619192 MCM10Q7L590 875 aa28.31■■■□□ 2.12
PMPCA-209ENST00000619192 LRP5O75197 1615 aa28.31■■■□□ 2.12
PMPCA-209ENST00000619192 UBR3Q6ZT12 1888 aa28.3■■■□□ 2.12
PMPCA-209ENST00000619192 MRS2Q9HD23 443 aa28.3■■■□□ 2.12
PMPCA-209ENST00000619192 ATP6V1AP38606 617 aa28.29■■■□□ 2.12
PMPCA-209ENST00000619192 LINC00116Q8NCU8 138 aa28.29■■■□□ 2.12
PMPCA-209ENST00000619192 DCTN1Q14203 1278 aa28.28■■■□□ 2.12
PMPCA-209ENST00000619192 CCDC146Q8IYE0 955 aa28.28■■■□□ 2.12
PMPCA-209ENST00000619192 SLC39A6Q13433 755 aa28.27■■■□□ 2.12
PMPCA-209ENST00000619192 ZNF790Q6PG37 636 aa28.27■■■□□ 2.12
PMPCA-209ENST00000619192 KDM3BQ7LBC6 1761 aa28.27■■■□□ 2.12
PMPCA-209ENST00000619192 VSIG10Q8N0Z9 540 aa28.26■■■□□ 2.11
PMPCA-209ENST00000619192 COL24A1Q17RW2 1714 aa28.26■■■□□ 2.11
PMPCA-209ENST00000619192 PNPLA7Q6ZV29 1317 aa28.25■■■□□ 2.11
PMPCA-209ENST00000619192 MYH14Q7Z406 1995 aaKnown RBP28.25■■■□□ 2.11
PMPCA-209ENST00000619192 RIPK4P57078 832 aa28.25■■■□□ 2.11
PMPCA-209ENST00000619192 RBM42Q9BTD8 480 aaKnown RBP28.25■■■□□ 2.11
PMPCA-209ENST00000619192 CNTNAP4Q9C0A0 1308 aa28.24■■■□□ 2.11
PMPCA-209ENST00000619192 PTCD1O75127 700 aaKnown RBP28.24■■■□□ 2.11
PMPCA-209ENST00000619192 RC3H1Q5TC82 1133 aaKnown RBP28.24■■■□□ 2.11
PMPCA-209ENST00000619192 LMOD3Q0VAK6 560 aa28.23■■■□□ 2.11
PMPCA-209ENST00000619192 PDGFDQ9GZP0 370 aaPredicted RBP28.23■■■□□ 2.11
PMPCA-209ENST00000619192 BTBD11A6QL63 1104 aa28.22■■■□□ 2.11
PMPCA-209ENST00000619192 TAF7Q15545 349 aaPredicted RBP28.22■■■□□ 2.11
PMPCA-209ENST00000619192 TRIM35Q9UPQ4 493 aa28.22■■■□□ 2.11
PMPCA-209ENST00000619192 TFCP2L1Q9NZI6 479 aa28.21■■■□□ 2.11
PMPCA-209ENST00000619192 HEG1Q9ULI3 1381 aa28.21■■■□□ 2.11
PMPCA-209ENST00000619192 TTC5Q8N0Z6 440 aa28.2■■■□□ 2.1
PMPCA-209ENST00000619192 ZNF496Q96IT1 587 aaPredicted RBP28.2■■■□□ 2.1
PMPCA-209ENST00000619192 AMIGO3Q86WK7 504 aa28.19■■■□□ 2.1
PMPCA-209ENST00000619192 NCBP3Q53F19 620 aaKnown RBP28.18■■■□□ 2.1
PMPCA-209ENST00000619192 FLAD1Q8NFF5 587 aa28.18■■■□□ 2.1
PMPCA-209ENST00000619192 SLC16A10Q8TF71 515 aa28.18■■■□□ 2.1
PMPCA-209ENST00000619192 AK7Q96M32 723 aa28.18■■■□□ 2.1
PMPCA-209ENST00000619192 THUMPD2Q9BTF0 503 aaKnown RBP28.18■■■□□ 2.1
PMPCA-209ENST00000619192 RRP7AQ9Y3A4 280 aaKnown RBP28.18■■■□□ 2.1
PMPCA-209ENST00000619192 APAF1O14727 1248 aa28.17■■■□□ 2.1
PMPCA-209ENST00000619192 KCNQ3O43525 872 aa28.17■■■□□ 2.1
PMPCA-209ENST00000619192 SSFA2P28290 1259 aa28.17■■■□□ 2.1
PMPCA-209ENST00000619192 BABAM1Q9NWV8 329 aa28.17■■■□□ 2.1
PMPCA-209ENST00000619192 DNAJC10Q8IXB1 793 aa28.16■■■□□ 2.1
PMPCA-209ENST00000619192 FMNL2Q96PY5 1086 aa28.16■■■□□ 2.1
PMPCA-209ENST00000619192 CCER2I3L3R5 266 aa28.15■■■□□ 2.1
PMPCA-209ENST00000619192 CYP19A1P11511 503 aaPredicted RBP28.15■■■□□ 2.1
PMPCA-209ENST00000619192 COL23A1Q86Y22 540 aaPredicted RBP28.15■■■□□ 2.1
PMPCA-209ENST00000619192 MTFR1LQ9H019 292 aa28.14■■■□□ 2.1
PMPCA-209ENST00000619192 CRKLP46109 303 aaKnown RBP28.13■■■□□ 2.09
PMPCA-209ENST00000619192 INTS5Q6P9B9 1019 aaKnown RBP28.13■■■□□ 2.09
PMPCA-209ENST00000619192 TEX13AQ9BXU3 409 aaPredicted RBP28.13■■■□□ 2.09
PMPCA-209ENST00000619192 GNPATO15228 680 aa28.12■■■□□ 2.09
PMPCA-209ENST00000619192 RPS6KA4O75676 772 aa28.12■■■□□ 2.09
PMPCA-209ENST00000619192 NEUROD2Q15784 382 aa28.12■■■□□ 2.09
PMPCA-209ENST00000619192 SGIP1Q9BQI5 828 aa28.12■■■□□ 2.09
PMPCA-209ENST00000619192 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.11■■■□□ 2.09
PMPCA-209ENST00000619192 ADRA2BP18089 450 aa28.11■■■□□ 2.09
PMPCA-209ENST00000619192 CCDC27Q2M243 656 aa28.11■■■□□ 2.09
PMPCA-209ENST00000619192 DIEXFQ68CQ4 756 aaKnown RBP28.11■■■□□ 2.09
PMPCA-209ENST00000619192 SPON1Q9HCB6 807 aa28.11■■■□□ 2.09
PMPCA-209ENST00000619192 C4AP0C0L4 1744 aa28.11■■■□□ 2.09
PMPCA-209ENST00000619192 LAMB4A4D0S4 1761 aa28.11■■■□□ 2.09
PMPCA-209ENST00000619192 PTGER2P43116 358 aa28.09■■■□□ 2.09
PMPCA-209ENST00000619192 CCDC87Q9NVE4 849 aa28.09■■■□□ 2.09
PMPCA-209ENST00000619192 MIS18AQ9NYP9 233 aa28.09■■■□□ 2.09
PMPCA-209ENST00000619192 RTCBQ9Y3I0 505 aaKnown RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms