RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 CACNA2D4Q7Z3S7 1137 aa13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 ADAMTS8Q9UP79 889 aa13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 YEATS4O95619 227 aa13.34□□□□□ -0.27
PCDHA4-204ENST00000618834 BMS1Q14692 1282 aaKnown RBP13.34□□□□□ -0.27
PCDHA4-204ENST00000618834 CTNNA3Q9UI47 895 aa13.34□□□□□ -0.27
PCDHA4-204ENST00000618834 SPECC1Q5M775 1068 aa13.34□□□□□ -0.27
PCDHA4-204ENST00000618834 PRIMPOLQ96LW4 560 aa13.34□□□□□ -0.27
PCDHA4-204ENST00000618834 EHBP1Q8NDI1 1231 aa13.34□□□□□ -0.27
PCDHA4-204ENST00000618834 SREK1Q8WXA9 508 aaKnown RBP13.34□□□□□ -0.27
PCDHA4-204ENST00000618834 RAPGEF4Q8WZA2 1011 aa13.34□□□□□ -0.27
PCDHA4-204ENST00000618834 KLHL10Q6JEL2 608 aa13.34□□□□□ -0.27
PCDHA4-204ENST00000618834 CCDC150Q8NCX0 1101 aa13.34□□□□□ -0.27
PCDHA4-204ENST00000618834 CCDC160A6NGH7 325 aa13.34□□□□□ -0.27
PCDHA4-204ENST00000618834 PHAXQ9H814 394 aaKnown RBP13.34□□□□□ -0.27
PCDHA4-204ENST00000618834 AACSQ86V21 672 aa13.33□□□□□ -0.27
PCDHA4-204ENST00000618834 CFAP65Q6ZU64 1925 aaKnown RBP13.33□□□□□ -0.27
PCDHA4-204ENST00000618834 TMCO5BA8MYB1 307 aa13.33□□□□□ -0.27
PCDHA4-204ENST00000618834 SCAND2PQ9GZW5 306 aaPredicted RBP13.33□□□□□ -0.27
PCDHA4-204ENST00000618834 DNA2P51530 1060 aa13.33□□□□□ -0.28
PCDHA4-204ENST00000618834 MACROD2A1Z1Q3 448 aa13.33□□□□□ -0.28
PCDHA4-204ENST00000618834 TTC31Q49AM3 519 aaPredicted RBP13.33□□□□□ -0.28
PCDHA4-204ENST00000618834 TRMT1Q9NXH9 659 aaKnown RBP13.33□□□□□ -0.28
PCDHA4-204ENST00000618834 ZNF76P36508 570 aa13.33□□□□□ -0.28
PCDHA4-204ENST00000618834 TDO2P48775 406 aa13.33□□□□□ -0.28
PCDHA4-204ENST00000618834 CWC27Q6UX04 472 aaKnown RBP13.33□□□□□ -0.28
PCDHA4-204ENST00000618834 SEC63Q9UGP8 760 aaKnown RBP13.33□□□□□ -0.28
PCDHA4-204ENST00000618834 TMX1Q9H3N1 280 aa13.32□□□□□ -0.28
PCDHA4-204ENST00000618834 IKBKGQ9Y6K9 419 aa13.32□□□□□ -0.28
PCDHA4-204ENST00000618834 MVPQ14764 893 aaKnown RBP13.32□□□□□ -0.28
PCDHA4-204ENST00000618834 CCDC171Q6TFL3 1326 aa13.32□□□□□ -0.28
PCDHA4-204ENST00000618834 GAS2L2Q8NHY3 880 aa13.32□□□□□ -0.28
PCDHA4-204ENST00000618834 CCDC6Q16204 474 aa13.32□□□□□ -0.28
PCDHA4-204ENST00000618834 PPP1R14CQ8TAE6 165 aa13.32□□□□□ -0.28
PCDHA4-204ENST00000618834 DDX12PQ92771 950 aa13.32□□□□□ -0.28
PCDHA4-204ENST00000618834 CPSF2Q9P2I0 782 aaKnown RBP13.32□□□□□ -0.28
PCDHA4-204ENST00000618834 ZWINTO95229 277 aa13.31□□□□□ -0.28
PCDHA4-204ENST00000618834 SIL1Q9H173 461 aa13.31□□□□□ -0.28
PCDHA4-204ENST00000618834 HYPKQ9NX55 129 aa13.31□□□□□ -0.28
PCDHA4-204ENST00000618834 MYOM3Q5VTT5 1437 aa13.31□□□□□ -0.28
PCDHA4-204ENST00000618834 CTNNA2P26232 953 aa13.31□□□□□ -0.28
PCDHA4-204ENST00000618834 LIG1P18858 919 aa13.31□□□□□ -0.28
PCDHA4-204ENST00000618834 FBF1Q8TES7 1133 aa13.31□□□□□ -0.28
PCDHA4-204ENST00000618834 SH2B1Q9NRF2 756 aaPredicted RBP13.31□□□□□ -0.28
PCDHA4-204ENST00000618834 A0A1W2PRG0 241 aa13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 TWISTNBQ3B726 338 aaPredicted RBP13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 V9GYY5 206 aaPredicted RBP13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 ADCY5O95622 1261 aa13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 TSNARE1Q96NA8 513 aa13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 HOMER2Q9NSB8 354 aa13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 SERPINA10Q9UK55 444 aa13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 TMC6Q7Z403 805 aa13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 NOL3O60936 208 aaKnown RBP13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 KIF4AO95239 1232 aa13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 FAM114A1Q8IWE2 563 aa13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 TCP11L2Q8N4U5 519 aa13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 JADE2Q9NQC1 790 aa13.3□□□□□ -0.28
PCDHA4-204ENST00000618834 RSPH14Q9UHP6 348 aa13.29□□□□□ -0.28
PCDHA4-204ENST00000618834 DDX46Q7L014 1031 aaKnown RBP13.29□□□□□ -0.28
PCDHA4-204ENST00000618834 STMN4Q9H169 189 aaPredicted RBP13.29□□□□□ -0.28
PCDHA4-204ENST00000618834 ARFGAP3Q9NP61 516 aa13.29□□□□□ -0.28
PCDHA4-204ENST00000618834 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
PCDHA4-204ENST00000618834 CCDC121Q6ZUS5 278 aa13.29□□□□□ -0.28
PCDHA4-204ENST00000618834 FKBP4Q02790 459 aaKnown RBP eCLIP13.29□□□□□ -0.28
PCDHA4-204ENST00000618834 CKAP4Q07065 602 aaKnown RBP13.29□□□□□ -0.28
PCDHA4-204ENST00000618834 CCDC155Q8N6L0 562 aa13.29□□□□□ -0.28
PCDHA4-204ENST00000618834 CDCA7LQ96GN5 454 aa13.29□□□□□ -0.28
PCDHA4-204ENST00000618834 MPHOSPH10O00566 681 aaKnown RBP13.29□□□□□ -0.28
PCDHA4-204ENST00000618834 TNIP1Q15025 636 aa13.29□□□□□ -0.28
PCDHA4-204ENST00000618834 GTPBP4Q9BZE4 634 aaKnown RBP13.29□□□□□ -0.28
PCDHA4-204ENST00000618834 MXRA7P84157 204 aa13.28□□□□□ -0.28
PCDHA4-204ENST00000618834 CEP83Q9Y592 693 aa13.28□□□□□ -0.28
PCDHA4-204ENST00000618834 SCLT1Q96NL6 688 aa13.28□□□□□ -0.28
PCDHA4-204ENST00000618834 RASAL2Q9UJF2 1139 aa13.28□□□□□ -0.28
PCDHA4-204ENST00000618834 COMMD10Q9Y6G5 202 aa13.28□□□□□ -0.28
PCDHA4-204ENST00000618834 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
PCDHA4-204ENST00000618834 ATP2C2O75185 946 aa13.28□□□□□ -0.28
PCDHA4-204ENST00000618834 CAVIN2O95810 425 aa13.28□□□□□ -0.28
PCDHA4-204ENST00000618834 PDS5BQ9NTI5 1447 aa13.27□□□□□ -0.28
PCDHA4-204ENST00000618834 CECR2Q9BXF3 1484 aa13.27□□□□□ -0.28
PCDHA4-204ENST00000618834 RSRC1Q96IZ7 334 aaKnown RBP13.27□□□□□ -0.28
PCDHA4-204ENST00000618834 USP25Q9UHP3 1055 aa13.27□□□□□ -0.28
PCDHA4-204ENST00000618834 CEP57Q86XR8 500 aa13.27□□□□□ -0.29
PCDHA4-204ENST00000618834 FGD6Q6ZV73 1430 aa13.27□□□□□ -0.29
PCDHA4-204ENST00000618834 NLRP2Q9NX02 1062 aa13.27□□□□□ -0.29
PCDHA4-204ENST00000618834 WDR97A6NE52 1622 aa13.27□□□□□ -0.29
PCDHA4-204ENST00000618834 PPP4R3AQ6IN85 833 aa13.27□□□□□ -0.29
PCDHA4-204ENST00000618834 TSR2Q969E8 191 aaKnown RBP13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 EXOSC9Q06265 439 aaKnown RBP13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 ARHGAP5Q13017 1502 aa13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 PRPF4BQ13523 1007 aaKnown RBP13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 PIBF1Q8WXW3 757 aa13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 ANAPC4Q9UJX5 808 aa13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 MTHFSP49914 203 aa13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 ATF7IPQ6VMQ6 1270 aa13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 ZNF526Q8TF50 670 aaPredicted RBP13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 CCDC12Q8WUD4 166 aaPredicted RBP13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 TDRD12Q587J7 1177 aaKnown RBP13.26□□□□□ -0.29
PCDHA4-204ENST00000618834 UBA5Q9GZZ9 404 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms