RNA–Protein interactions for RNA: ENST00000618666.4

CCNT1-205, Transcript of cyclin T1, humanhuman

TSL 2 BASIC

Gene CCNT1, Length 6,915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-205ENST00000618666 ZNF500O60304 480 aaPredicted RBP6.29□□□□□ -1.4
CCNT1-205ENST00000618666 HDGFP51858 240 aaKnown RBP6.29□□□□□ -1.4
CCNT1-205ENST00000618666 HNRNPH2P55795 449 aaKnown RBP6.29□□□□□ -1.4
CCNT1-205ENST00000618666 ZKSCAN2Q63HK3 967 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 ST7Q9NRC1 585 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 KARSQ15046 597 aaKnown RBP6.29□□□□□ -1.4
CCNT1-205ENST00000618666 TCHPQ9BT92 498 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 OAS2P29728 719 aaKnown RBP6.29□□□□□ -1.4
CCNT1-205ENST00000618666 GNG11P61952 73 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 SPECC1Q5M775 1068 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 FBF1Q8TES7 1133 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 CHAMP1Q96JM3 812 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 CFDP1Q9UEE9 299 aaPredicted RBP6.29□□□□□ -1.4
CCNT1-205ENST00000618666 FRMD4BQ9Y2L6 1034 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 PRR29P0C7W0 189 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 SESN3P58005 492 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 KLHL10Q6JEL2 608 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 OLFM4Q6UX06 510 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 DNAI2Q9GZS0 605 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 JRKLQ9Y4A0 524 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 WASHC2CQ9Y4E1 1318 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 EBAG9O00559 213 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 TRIM66O15016 1216 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 HPDP32754 393 aaPredicted RBP6.29□□□□□ -1.4
CCNT1-205ENST00000618666 GUCY1B3Q02153 619 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 TMEM165Q9HC07 324 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 TFIP11Q9UBB9 837 aaKnown RBP6.29□□□□□ -1.4
CCNT1-205ENST00000618666 SLC4A7Q9Y6M7 1214 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 SMARCA2P51531 1590 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 KINO60870 393 aaKnown RBP6.29□□□□□ -1.4
CCNT1-205ENST00000618666 HLTFQ14527 1009 aaKnown RBP eCLIP6.29□□□□□ -1.4
CCNT1-205ENST00000618666 RBSNQ9H1K0 784 aa6.29□□□□□ -1.4
CCNT1-205ENST00000618666 CASTP20810 708 aaKnown RBP6.28□□□□□ -1.4
CCNT1-205ENST00000618666 NUTM2GQ5VZR2 741 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 CCDC12Q8WUD4 166 aaPredicted RBP6.28□□□□□ -1.4
CCNT1-205ENST00000618666 RBM42Q9BTD8 480 aaKnown RBP6.28□□□□□ -1.4
CCNT1-205ENST00000618666 UPF3BQ9BZI7 483 aaKnown RBP6.28□□□□□ -1.4
CCNT1-205ENST00000618666 SIL1Q9H173 461 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 FEZ2Q9UHY8 353 aaPredicted RBP6.28□□□□□ -1.4
CCNT1-205ENST00000618666 TMEM110-MUSTN1A8MSY1 372 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 SMIM24O75264 130 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 CCDC175P0C221 793 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 ME1P48163 572 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 IFFO1Q0D2I5 559 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 NBPF8Q3BBV2 869 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 SPATS2LQ9NUQ6 558 aaKnown RBP6.28□□□□□ -1.4
CCNT1-205ENST00000618666 ZBTB21Q9ULJ3 1066 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 SEC31AO94979 1220 aaKnown RBP6.28□□□□□ -1.4
CCNT1-205ENST00000618666 USHBP1Q8N6Y0 703 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 PRIMPOLQ96LW4 560 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 RMDN2Q96LZ7 410 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 ANLNQ9NQW6 1124 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 MBD3O95983 291 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 DDX27Q96GQ7 796 aaKnown RBP6.28□□□□□ -1.4
CCNT1-205ENST00000618666 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.28□□□□□ -1.42e-6■■■■■ 75.7
CCNT1-205ENST00000618666 INPP5BP32019 993 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 EIF5P55010 431 aaKnown RBP6.28□□□□□ -1.4
CCNT1-205ENST00000618666 DAAM2Q86T65 1068 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 NAP1L3Q99457 506 aaPredicted RBP6.28□□□□□ -1.4
CCNT1-205ENST00000618666 SAMM50Q9Y512 469 aa6.28□□□□□ -1.4
CCNT1-205ENST00000618666 IPO8O15397 1037 aaKnown RBP6.27□□□□□ -1.4
CCNT1-205ENST00000618666 MXRA7P84157 204 aa6.27□□□□□ -1.4
CCNT1-205ENST00000618666 MAP9Q49MG5 647 aa6.27□□□□□ -1.4
CCNT1-205ENST00000618666 CCDC121Q6ZUS5 278 aa6.27□□□□□ -1.4
CCNT1-205ENST00000618666 PDS5BQ9NTI5 1447 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 CAND2O75155 1236 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 CAVIN2O95810 425 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 KIF5BP33176 963 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 ACRBPQ8NEB7 543 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 RIPOR2Q9Y4F9 1068 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 SEC24BO95487 1268 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 IVLP07476 585 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 TRHP20396 242 aaPredicted RBP6.27□□□□□ -1.41
CCNT1-205ENST00000618666 MAP7D1Q3KQU3 841 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 TRIML1Q8N9V2 468 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 NUP62CLQ9H1M0 184 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 ARFGAP3Q9NP61 516 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 RABEP1Q15276 862 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 CWC22Q9HCG8 908 aaKnown RBP6.27□□□□□ -1.41
CCNT1-205ENST00000618666 SEPT11Q9NVA2 429 aaKnown RBP6.27□□□□□ -1.41
CCNT1-205ENST00000618666 STK10O94804 968 aaKnown RBP6.27□□□□□ -1.41
CCNT1-205ENST00000618666 PPFIBP1Q86W92 1011 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 ZNF397Q8NF99 534 aaPredicted RBP6.27□□□□□ -1.41
CCNT1-205ENST00000618666 SMARCE1Q969G3 411 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 SKAP2O75563 359 aaPredicted RBP6.27□□□□□ -1.41
CCNT1-205ENST00000618666 PPP1R15AO75807 674 aaPredicted RBP6.27□□□□□ -1.41
CCNT1-205ENST00000618666 CCDC172P0C7W6 258 aa6.27□□□□□ -1.41
CCNT1-205ENST00000618666 PROSER2Q86WR7 435 aaPredicted RBP6.27□□□□□ -1.41
CCNT1-205ENST00000618666 ACTN3Q08043 901 aaPredicted RBP6.26□□□□□ -1.41
CCNT1-205ENST00000618666 SMC1AQ14683 1233 aaKnown RBP6.26□□□□□ -1.41
CCNT1-205ENST00000618666 NAA30Q147X3 362 aaPredicted RBP6.26□□□□□ -1.41
CCNT1-205ENST00000618666 RBBP5Q15291 538 aaKnown RBP6.26□□□□□ -1.41
CCNT1-205ENST00000618666 CDK5RAP3Q96JB5 506 aa6.26□□□□□ -1.41
CCNT1-205ENST00000618666 LBHD1Q9BQE6 289 aaPredicted RBP6.26□□□□□ -1.41
CCNT1-205ENST00000618666 ERC2O15083 957 aa6.26□□□□□ -1.41
CCNT1-205ENST00000618666 SCP2P22307 547 aa6.26□□□□□ -1.41
CCNT1-205ENST00000618666 SFPQP23246 707 aaKnown RBP eCLIP6.26□□□□□ -1.41
CCNT1-205ENST00000618666 SELENOSQ9BQE4 189 aa6.26□□□□□ -1.41
CCNT1-205ENST00000618666 TRIM4Q9C037 500 aa6.26□□□□□ -1.41
CCNT1-205ENST00000618666 RRP15Q9Y3B9 282 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms