RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 ASAP1Q9ULH1 1129 aa15.74■□□□□ 0.11
SHANK2-221ENST00000618363 TOGARAM1Q9Y4F4 1720 aa15.74■□□□□ 0.11
SHANK2-221ENST00000618363 RBM42Q9BTD8 480 aaKnown RBP15.73■□□□□ 0.11
SHANK2-221ENST00000618363 FHDC1Q9C0D6 1143 aaPredicted RBP15.73■□□□□ 0.11
SHANK2-221ENST00000618363 KDRP35968 1356 aa15.73■□□□□ 0.11
SHANK2-221ENST00000618363 QSER1Q2KHR3 1735 aa15.72■□□□□ 0.11
SHANK2-221ENST00000618363 AKAP4Q5JQC9 854 aa15.72■□□□□ 0.11
SHANK2-221ENST00000618363 COL23A1Q86Y22 540 aaPredicted RBP15.72■□□□□ 0.11
SHANK2-221ENST00000618363 ATG3Q9NT62 314 aa15.72■□□□□ 0.11
SHANK2-221ENST00000618363 NUDCQ9Y266 331 aa15.72■□□□□ 0.11
SHANK2-221ENST00000618363 C5P01031 1676 aa15.71■□□□□ 0.11
SHANK2-221ENST00000618363 SYT17Q9BSW7 474 aa15.71■□□□□ 0.11
SHANK2-221ENST00000618363 PHF14O94880 888 aa15.7■□□□□ 0.1
SHANK2-221ENST00000618363 SGIP1Q9BQI5 828 aa15.7■□□□□ 0.1
SHANK2-221ENST00000618363 NFATC2IPQ8NCF5 419 aa15.69■□□□□ 0.1
SHANK2-221ENST00000618363 GNPATO15228 680 aa15.68■□□□□ 0.1
SHANK2-221ENST00000618363 SSFA2P28290 1259 aa15.68■□□□□ 0.1
SHANK2-221ENST00000618363 LINC00116Q8NCU8 138 aa15.68■□□□□ 0.1
SHANK2-221ENST00000618363 TAF1LQ8IZX4 1826 aa15.67■□□□□ 0.1
SHANK2-221ENST00000618363 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.67■□□□□ 0.1
SHANK2-221ENST00000618363 PTCD1O75127 700 aaKnown RBP15.67■□□□□ 0.1
SHANK2-221ENST00000618363 MSL1Q68DK7 614 aa15.67■□□□□ 0.1
SHANK2-221ENST00000618363 RTCBQ9Y3I0 505 aaKnown RBP15.67■□□□□ 0.1
SHANK2-221ENST00000618363 C4BP0C0L5 1744 aa15.67■□□□□ 0.1
SHANK2-221ENST00000618363 KDM6AO15550 1401 aaPredicted RBP15.67■□□□□ 0.1
SHANK2-221ENST00000618363 TUBGCP6Q96RT7 1819 aa15.66■□□□□ 0.1
SHANK2-221ENST00000618363 ITPK1Q13572 414 aa15.66■□□□□ 0.1
SHANK2-221ENST00000618363 MTHFSDQ2M296 383 aaKnown RBP15.66■□□□□ 0.1
SHANK2-221ENST00000618363 GAS2L2Q8NHY3 880 aa15.66■□□□□ 0.1
SHANK2-221ENST00000618363 RNMTO43148 476 aaKnown RBP15.65■□□□□ 0.1
SHANK2-221ENST00000618363 PPP2R1AP30153 589 aa15.65■□□□□ 0.1
SHANK2-221ENST00000618363 TRAPPC3LQ5T215 181 aa15.65■□□□□ 0.1
SHANK2-221ENST00000618363 SLC52A2Q9HAB3 445 aa15.65■□□□□ 0.1
SHANK2-221ENST00000618363 MAP3K5Q99683 1374 aa15.64■□□□□ 0.09
SHANK2-221ENST00000618363 NEFMP07197 916 aa15.64■□□□□ 0.09
SHANK2-221ENST00000618363 U2AF1L5P0DN76 240 aaPredicted RBP15.64■□□□□ 0.09
SHANK2-221ENST00000618363 YY1P25490 414 aa15.64■□□□□ 0.09
SHANK2-221ENST00000618363 U2AF1Q01081 240 aaKnown RBP eCLIP15.64■□□□□ 0.09
SHANK2-221ENST00000618363 GPR162Q16538 588 aa15.64■□□□□ 0.09
SHANK2-221ENST00000618363 LGR6Q9HBX8 967 aa15.64■□□□□ 0.09
SHANK2-221ENST00000618363 RC3H1Q5TC82 1133 aaKnown RBP15.63■□□□□ 0.09
SHANK2-221ENST00000618363 PELP1Q8IZL8 1130 aaKnown RBP15.63■□□□□ 0.09
SHANK2-221ENST00000618363 GNAT3A8MTJ3 354 aa15.62■□□□□ 0.09
SHANK2-221ENST00000618363 RFC4P35249 363 aa15.62■□□□□ 0.09
SHANK2-221ENST00000618363 TEFQ10587 303 aa15.62■□□□□ 0.09
SHANK2-221ENST00000618363 COL3A1P02461 1466 aaPredicted RBP15.61■□□□□ 0.09
SHANK2-221ENST00000618363 PRKAR2BP31323 418 aa15.61■□□□□ 0.09
SHANK2-221ENST00000618363 TTC5Q8N0Z6 440 aa15.61■□□□□ 0.09
SHANK2-221ENST00000618363 SCN11AQ9UI33 1791 aa15.61■□□□□ 0.09
SHANK2-221ENST00000618363 CNTNAP4Q9C0A0 1308 aa15.61■□□□□ 0.09
SHANK2-221ENST00000618363 RPS6KA4O75676 772 aa15.6■□□□□ 0.09
SHANK2-221ENST00000618363 SMIM5Q71RC9 77 aa15.6■□□□□ 0.09
SHANK2-221ENST00000618363 SLC4A9Q96Q91 983 aa15.6■□□□□ 0.09
SHANK2-221ENST00000618363 UBR3Q6ZT12 1888 aa15.59■□□□□ 0.09
SHANK2-221ENST00000618363 FCHSD2O94868 740 aa15.59■□□□□ 0.09
SHANK2-221ENST00000618363 NLGN1Q8N2Q7 840 aa15.59■□□□□ 0.09
SHANK2-221ENST00000618363 RTF1Q92541 710 aaKnown RBP15.59■□□□□ 0.09
SHANK2-221ENST00000618363 CD2APQ9Y5K6 639 aa15.59■□□□□ 0.09
SHANK2-221ENST00000618363 COL24A1Q17RW2 1714 aa15.58■□□□□ 0.08
SHANK2-221ENST00000618363 CRKLP46109 303 aaKnown RBP15.58■□□□□ 0.08
SHANK2-221ENST00000618363 SLC39A6Q13433 755 aa15.58■□□□□ 0.08
SHANK2-221ENST00000618363 AMIGO3Q86WK7 504 aa15.58■□□□□ 0.08
SHANK2-221ENST00000618363 ZNF831Q5JPB2 1677 aa15.57■□□□□ 0.08
SHANK2-221ENST00000618363 ZBTB22O15209 634 aa15.57■□□□□ 0.08
SHANK2-221ENST00000618363 ARHGEF1Q92888 912 aaKnown RBP15.57■□□□□ 0.08
SHANK2-221ENST00000618363 RSPH6AQ9H0K4 717 aa15.57■□□□□ 0.08
SHANK2-221ENST00000618363 PNNQ9H307 717 aaKnown RBP15.57■□□□□ 0.08
SHANK2-221ENST00000618363 DDX10Q13206 875 aaKnown RBP15.56■□□□□ 0.08
SHANK2-221ENST00000618363 NLGN2Q8NFZ4 835 aa15.56■□□□□ 0.08
SHANK2-221ENST00000618363 GRIN3BO60391 1043 aa15.55■□□□□ 0.08
SHANK2-221ENST00000618363 MMP10P09238 476 aa15.55■□□□□ 0.08
SHANK2-221ENST00000618363 RALBP1Q15311 655 aa15.55■□□□□ 0.08
SHANK2-221ENST00000618363 NPM2Q86SE8 214 aaKnown RBP15.55■□□□□ 0.08
SHANK2-221ENST00000618363 DNAJC10Q8IXB1 793 aa15.55■□□□□ 0.08
SHANK2-221ENST00000618363 VSIG10Q8N0Z9 540 aa15.55■□□□□ 0.08
SHANK2-221ENST00000618363 IL17REQ8NFR9 667 aa15.55■□□□□ 0.08
SHANK2-221ENST00000618363 PHACTR3Q96KR7 559 aa15.55■□□□□ 0.08
SHANK2-221ENST00000618363 CCDC87Q9NVE4 849 aa15.55■□□□□ 0.08
SHANK2-221ENST00000618363 MRC1P22897 1456 aa15.54■□□□□ 0.08
SHANK2-221ENST00000618363 ZPR1O75312 459 aa15.54■□□□□ 0.08
SHANK2-221ENST00000618363 STARD3NLO95772 234 aa15.54■□□□□ 0.08
SHANK2-221ENST00000618363 TEX13AQ9BXU3 409 aaPredicted RBP15.54■□□□□ 0.08
SHANK2-221ENST00000618363 PARP3Q9Y6F1 533 aa15.54■□□□□ 0.08
SHANK2-221ENST00000618363 VIRMAQ69YN4 1812 aaKnown RBP15.53■□□□□ 0.08
SHANK2-221ENST00000618363 BTBD11A6QL63 1104 aa15.53■□□□□ 0.08
SHANK2-221ENST00000618363 ZEB1P37275 1124 aaPredicted RBP15.53■□□□□ 0.08
SHANK2-221ENST00000618363 COL5A3P25940 1745 aaPredicted RBP15.53■□□□□ 0.08
SHANK2-221ENST00000618363 ZNF790Q6PG37 636 aa15.52■□□□□ 0.08
SHANK2-221ENST00000618363 MAPK8IP3Q9UPT6 1336 aa15.51■□□□□ 0.07
SHANK2-221ENST00000618363 HTATSF1O43719 755 aaKnown RBP15.51■□□□□ 0.07
SHANK2-221ENST00000618363 CYP19A1P11511 503 aaPredicted RBP15.51■□□□□ 0.07
SHANK2-221ENST00000618363 GYS1P13807 737 aa15.51■□□□□ 0.07
SHANK2-221ENST00000618363 INTS5Q6P9B9 1019 aaKnown RBP15.51■□□□□ 0.07
SHANK2-221ENST00000618363 FMNL2Q96PY5 1086 aa15.51■□□□□ 0.07
SHANK2-221ENST00000618363 MYH14Q7Z406 1995 aaKnown RBP15.49■□□□□ 0.07
SHANK2-221ENST00000618363 USP42Q9H9J4 1324 aaKnown RBP15.49■□□□□ 0.07
SHANK2-221ENST00000618363 ADAMTS7Q9UKP4 1686 aa15.49■□□□□ 0.07
SHANK2-221ENST00000618363 A0A087WZG4 1122 aa15.49■□□□□ 0.07
SHANK2-221ENST00000618363 CANXP27824 592 aaKnown RBP15.49■□□□□ 0.07
SHANK2-221ENST00000618363 MCM10Q7L590 875 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms