RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 IFT57Q9NWB7 429 aa10.51□□□□□ -0.73
TARDBP-219ENST00000617757 LAS1LQ9Y4W2 734 aaKnown RBP10.51□□□□□ -0.73
TARDBP-219ENST00000617757 SBF2Q86WG5 1849 aa10.51□□□□□ -0.73
TARDBP-219ENST00000617757 PAPPAQ13219 1627 aa10.51□□□□□ -0.73
TARDBP-219ENST00000617757 KAT6BQ8WYB5 2073 aa10.5□□□□□ -0.73
TARDBP-219ENST00000617757 CHL1O00533 1208 aa10.5□□□□□ -0.73
TARDBP-219ENST00000617757 ONECUT3O60422 494 aaPredicted RBP10.5□□□□□ -0.73
TARDBP-219ENST00000617757 TSR2Q969E8 191 aaKnown RBP10.5□□□□□ -0.73
TARDBP-219ENST00000617757 MYH16Q9H6N6 1097 aa10.5□□□□□ -0.73
TARDBP-219ENST00000617757 FANCIQ9NVI1 1328 aa10.5□□□□□ -0.73
TARDBP-219ENST00000617757 UBR2Q8IWV8 1755 aa10.49□□□□□ -0.73
TARDBP-219ENST00000617757 TEFQ10587 303 aa10.49□□□□□ -0.73
TARDBP-219ENST00000617757 TAF7Q15545 349 aaPredicted RBP10.49□□□□□ -0.73
TARDBP-219ENST00000617757 MARCH10Q8NA82 808 aaPredicted RBP10.49□□□□□ -0.73
TARDBP-219ENST00000617757 MBIPQ9NS73 344 aa10.49□□□□□ -0.73
TARDBP-219ENST00000617757 BABAM1Q9NWV8 329 aa10.49□□□□□ -0.73
TARDBP-219ENST00000617757 MIS18AQ9NYP9 233 aa10.48□□□□□ -0.73
TARDBP-219ENST00000617757 RGS17Q9UGC6 210 aaPredicted RBP10.48□□□□□ -0.73
TARDBP-219ENST00000617757 ERVV-2B6SEH9 535 aa10.47□□□□□ -0.73
TARDBP-219ENST00000617757 RBM6P78332 1123 aaKnown RBP10.47□□□□□ -0.73
TARDBP-219ENST00000617757 EXOSC9Q06265 439 aaKnown RBP10.47□□□□□ -0.73
TARDBP-219ENST00000617757 SLC52A2Q9HAB3 445 aa10.47□□□□□ -0.73
TARDBP-219ENST00000617757 TSPYL4Q9UJ04 414 aa10.47□□□□□ -0.73
TARDBP-219ENST00000617757 C5P01031 1676 aa10.47□□□□□ -0.73
TARDBP-219ENST00000617757 A0A0G2JS52 829 aa10.46□□□□□ -0.73
TARDBP-219ENST00000617757 BTBD11A6QL63 1104 aa10.46□□□□□ -0.73
TARDBP-219ENST00000617757 CABP4P57796 275 aa10.46□□□□□ -0.73
TARDBP-219ENST00000617757 MYT1Q01538 1121 aa10.46□□□□□ -0.73
TARDBP-219ENST00000617757 SEPT12Q8IYM1 358 aa10.46□□□□□ -0.73
TARDBP-219ENST00000617757 NFATC2IPQ8NCF5 419 aa10.46□□□□□ -0.73
TARDBP-219ENST00000617757 NHSQ6T4R5 1651 aa10.46□□□□□ -0.74
TARDBP-219ENST00000617757 CACNA1FO60840 1977 aa10.46□□□□□ -0.74
TARDBP-219ENST00000617757 BTAF1O14981 1849 aa10.44□□□□□ -0.74
TARDBP-219ENST00000617757 LAMB4A4D0S4 1761 aa10.44□□□□□ -0.74
TARDBP-219ENST00000617757 POTEAQ6S8J7 498 aa10.44□□□□□ -0.74
TARDBP-219ENST00000617757 C8orf58Q8NAV2 365 aa10.44□□□□□ -0.74
TARDBP-219ENST00000617757 BCL9O00512 1426 aa10.43□□□□□ -0.74
TARDBP-219ENST00000617757 KCNQ3O43525 872 aa10.43□□□□□ -0.74
TARDBP-219ENST00000617757 VAMP4O75379 141 aa10.43□□□□□ -0.74
TARDBP-219ENST00000617757 CT47B1P0C2W7 299 aaPredicted RBP10.43□□□□□ -0.74
TARDBP-219ENST00000617757 RXRBP28702 533 aa10.43□□□□□ -0.74
TARDBP-219ENST00000617757 KRT24Q2M2I5 525 aa10.43□□□□□ -0.74
TARDBP-219ENST00000617757 TSPYL6Q8N831 410 aa10.43□□□□□ -0.74
TARDBP-219ENST00000617757 TMOD3Q9NYL9 352 aa10.43□□□□□ -0.74
TARDBP-219ENST00000617757 RCAN3Q9UKA8 241 aa10.43□□□□□ -0.74
TARDBP-219ENST00000617757 ELL2O00472 640 aaPredicted RBP10.42□□□□□ -0.74
TARDBP-219ENST00000617757 NPM3O75607 178 aaKnown RBP10.42□□□□□ -0.74
TARDBP-219ENST00000617757 EIF4A1P60842 406 aaKnown RBP10.42□□□□□ -0.74
TARDBP-219ENST00000617757 SLC39A6Q13433 755 aa10.42□□□□□ -0.74
TARDBP-219ENST00000617757 TWISTNBQ3B726 338 aaPredicted RBP10.42□□□□□ -0.74
TARDBP-219ENST00000617757 ZNF790Q6PG37 636 aa10.42□□□□□ -0.74
TARDBP-219ENST00000617757 PIGBQ92521 554 aa10.42□□□□□ -0.74
TARDBP-219ENST00000617757 ACSBG1Q96GR2 724 aa10.42□□□□□ -0.74
TARDBP-219ENST00000617757 KCPQ6ZWJ8 1503 aa10.42□□□□□ -0.74
TARDBP-219ENST00000617757 HEG1Q9ULI3 1381 aa10.41□□□□□ -0.74
TARDBP-219ENST00000617757 PRIM1P49642 420 aaKnown RBP10.41□□□□□ -0.74
TARDBP-219ENST00000617757 FAM182BQ5T319 152 aa10.41□□□□□ -0.74
TARDBP-219ENST00000617757 KRT27Q7Z3Y8 459 aa10.41□□□□□ -0.74
TARDBP-219ENST00000617757 TJP1Q07157 1748 aa10.41□□□□□ -0.74
TARDBP-219ENST00000617757 RGS12O14924 1447 aa10.41□□□□□ -0.74
TARDBP-219ENST00000617757 ZNF831Q5JPB2 1677 aa10.41□□□□□ -0.74
TARDBP-219ENST00000617757 CICQ96RK0 1608 aaPredicted RBP10.4□□□□□ -0.74
TARDBP-219ENST00000617757 SOS1Q07889 1333 aaPredicted RBP10.4□□□□□ -0.74
TARDBP-219ENST00000617757 RARSP54136 660 aaKnown RBP10.4□□□□□ -0.74
TARDBP-219ENST00000617757 TTC5Q8N0Z6 440 aa10.4□□□□□ -0.74
TARDBP-219ENST00000617757 SYTL4Q96C24 671 aaPredicted RBP10.4□□□□□ -0.74
TARDBP-219ENST00000617757 SUPT16HQ9Y5B9 1047 aaKnown RBP10.4□□□□□ -0.74
TARDBP-219ENST00000617757 LY75O60449 1722 aa10.4□□□□□ -0.74
TARDBP-219ENST00000617757 KCNQ2O43526 872 aa10.39□□□□□ -0.75
TARDBP-219ENST00000617757 GIGYF1O75420 1035 aaPredicted RBP10.39□□□□□ -0.75
TARDBP-219ENST00000617757 ALDH1L2Q3SY69 923 aa10.39□□□□□ -0.75
TARDBP-219ENST00000617757 ZNF428Q96B54 188 aa10.39□□□□□ -0.75
TARDBP-219ENST00000617757 ZNF496Q96IT1 587 aaPredicted RBP10.39□□□□□ -0.75
TARDBP-219ENST00000617757 FMNL2Q96PY5 1086 aa10.39□□□□□ -0.75
TARDBP-219ENST00000617757 ASAP1Q9ULH1 1129 aa10.39□□□□□ -0.75
TARDBP-219ENST00000617757 RNF123Q5XPI4 1314 aa10.38□□□□□ -0.75
TARDBP-219ENST00000617757 TAF1LQ8IZX4 1826 aa10.38□□□□□ -0.75
TARDBP-219ENST00000617757 BCAR3O75815 825 aa10.38□□□□□ -0.75
TARDBP-219ENST00000617757 HOXB7P09629 217 aa10.38□□□□□ -0.75
TARDBP-219ENST00000617757 SSH1Q8WYL5 1049 aa10.38□□□□□ -0.75
TARDBP-219ENST00000617757 ATG3Q9NT62 314 aa10.38□□□□□ -0.75
TARDBP-219ENST00000617757 COL5A3P25940 1745 aaPredicted RBP10.38□□□□□ -0.75
TARDBP-219ENST00000617757 PRAMEF22A3QJZ6 481 aa10.37□□□□□ -0.75
TARDBP-219ENST00000617757 FAM196AQ6ZSG2 479 aa10.37□□□□□ -0.75
TARDBP-219ENST00000617757 TNS1Q9HBL0 1735 aaKnown RBP10.37□□□□□ -0.75
TARDBP-219ENST00000617757 TCERG1O14776 1098 aaKnown RBP10.36□□□□□ -0.75
TARDBP-219ENST00000617757 PTCD1O75127 700 aaKnown RBP10.36□□□□□ -0.75
TARDBP-219ENST00000617757 SNRPA1P09661 255 aaKnown RBP10.36□□□□□ -0.75
TARDBP-219ENST00000617757 RRP1P56182 461 aaKnown RBP10.36□□□□□ -0.75
TARDBP-219ENST00000617757 C1QBPQ07021 282 aaKnown RBP10.36□□□□□ -0.75
TARDBP-219ENST00000617757 PTF1AQ7RTS3 328 aa10.36□□□□□ -0.75
TARDBP-219ENST00000617757 VSIG10Q8N0Z9 540 aa10.36□□□□□ -0.75
TARDBP-219ENST00000617757 MRPL50Q8N5N7 158 aaKnown RBP10.36□□□□□ -0.75
TARDBP-219ENST00000617757 BCL2L13Q9BXK5 485 aa10.36□□□□□ -0.75
TARDBP-219ENST00000617757 SMC4Q9NTJ3 1288 aa10.36□□□□□ -0.75
TARDBP-219ENST00000617757 RREB1Q92766 1687 aa10.35□□□□□ -0.75
TARDBP-219ENST00000617757 N4BP2Q86UW6 1770 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-219ENST00000617757 EIF2S2P20042 333 aaKnown RBP10.35□□□□□ -0.75
TARDBP-219ENST00000617757 BRPF1P55201 1214 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-219ENST00000617757 HDGFL1Q5TGJ6 251 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms