RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 TRPC5Q9UL62 973 aaPredicted RBP21.02■□□□□ 0.95
SNAP47-213ENST00000617596 WNK3Q9BYP7 1800 aa21.01■□□□□ 0.95
SNAP47-213ENST00000617596 BCAR3O75815 825 aa21.01■□□□□ 0.95
SNAP47-213ENST00000617596 IRX6P78412 446 aaPredicted RBP21.01■□□□□ 0.95
SNAP47-213ENST00000617596 FKBP8Q14318 412 aa21.01■□□□□ 0.95
SNAP47-213ENST00000617596 BCL2L13Q9BXK5 485 aa21.01■□□□□ 0.95
SNAP47-213ENST00000617596 NKX1-1Q15270 411 aaPredicted RBP21■□□□□ 0.95
SNAP47-213ENST00000617596 TNS2Q63HR2 1409 aa21■□□□□ 0.95
SNAP47-213ENST00000617596 TNKS1BP1Q9C0C2 1729 aaKnown RBP21■□□□□ 0.95
SNAP47-213ENST00000617596 ATRNO75882 1429 aa21■□□□□ 0.95
SNAP47-213ENST00000617596 CABP4P57796 275 aa20.99■□□□□ 0.95
SNAP47-213ENST00000617596 SLC39A6Q13433 755 aa20.99■□□□□ 0.95
SNAP47-213ENST00000617596 ADAMTS7Q9UKP4 1686 aa20.99■□□□□ 0.95
SNAP47-213ENST00000617596 GLI3P10071 1580 aa20.99■□□□□ 0.95
SNAP47-213ENST00000617596 VIRMAQ69YN4 1812 aaKnown RBP20.98■□□□□ 0.95
SNAP47-213ENST00000617596 PLIN1O60240 522 aa20.98■□□□□ 0.95
SNAP47-213ENST00000617596 MARCH10Q8NA82 808 aaPredicted RBP20.98■□□□□ 0.95
SNAP47-213ENST00000617596 SCN11AQ9UI33 1791 aa20.98■□□□□ 0.95
SNAP47-213ENST00000617596 TCERG1O14776 1098 aaKnown RBP20.98■□□□□ 0.95
SNAP47-213ENST00000617596 RARSP54136 660 aaKnown RBP20.98■□□□□ 0.95
SNAP47-213ENST00000617596 TWISTNBQ3B726 338 aaPredicted RBP20.98■□□□□ 0.95
SNAP47-213ENST00000617596 VAMP4O75379 141 aa20.96■□□□□ 0.95
SNAP47-213ENST00000617596 BABAM1Q9NWV8 329 aa20.94■□□□□ 0.94
SNAP47-213ENST00000617596 ERVV-2B6SEH9 535 aa20.94■□□□□ 0.94
SNAP47-213ENST00000617596 RRP1P56182 461 aaKnown RBP20.94■□□□□ 0.94
SNAP47-213ENST00000617596 EIF4A1P60842 406 aaKnown RBP20.94■□□□□ 0.94
SNAP47-213ENST00000617596 FAM182BQ5T319 152 aa20.94■□□□□ 0.94
SNAP47-213ENST00000617596 SSH1Q8WYL5 1049 aa20.94■□□□□ 0.94
SNAP47-213ENST00000617596 SYTL4Q96C24 671 aaPredicted RBP20.94■□□□□ 0.94
SNAP47-213ENST00000617596 MRC1P22897 1456 aa20.93■□□□□ 0.94
SNAP47-213ENST00000617596 RNF123Q5XPI4 1314 aa20.92■□□□□ 0.94
SNAP47-213ENST00000617596 TOGARAM1Q9Y4F4 1720 aa20.92■□□□□ 0.94
SNAP47-213ENST00000617596 ZNF790Q6PG37 636 aa20.92■□□□□ 0.94
SNAP47-213ENST00000617596 ACSBG1Q96GR2 724 aa20.92■□□□□ 0.94
SNAP47-213ENST00000617596 SIPA1L3O60292 1781 aaPredicted RBP20.92■□□□□ 0.94
SNAP47-213ENST00000617596 CT47B1P0C2W7 299 aaPredicted RBP20.92■□□□□ 0.94
SNAP47-213ENST00000617596 SEPT12Q8IYM1 358 aa20.92■□□□□ 0.94
SNAP47-213ENST00000617596 NECTIN2Q92692 538 aa20.92■□□□□ 0.94
SNAP47-213ENST00000617596 SMC4Q9NTJ3 1288 aa20.92■□□□□ 0.94
SNAP47-213ENST00000617596 ZNF772Q68DY9 489 aaPredicted RBP20.91■□□□□ 0.94
SNAP47-213ENST00000617596 PRAMEF22A3QJZ6 481 aa20.9■□□□□ 0.94
SNAP47-213ENST00000617596 PRIM1P49642 420 aaKnown RBP20.9■□□□□ 0.94
SNAP47-213ENST00000617596 PIGBQ92521 554 aa20.9■□□□□ 0.94
SNAP47-213ENST00000617596 FRAT1Q92837 279 aaPredicted RBP20.9■□□□□ 0.94
SNAP47-213ENST00000617596 TMOD3Q9NYL9 352 aa20.9■□□□□ 0.94
SNAP47-213ENST00000617596 THSD7AQ9UPZ6 1657 aa20.9■□□□□ 0.94
SNAP47-213ENST00000617596 ONECUT3O60422 494 aaPredicted RBP20.9■□□□□ 0.94
SNAP47-213ENST00000617596 KDM3BQ7LBC6 1761 aa20.9■□□□□ 0.94
SNAP47-213ENST00000617596 RGS17Q9UGC6 210 aaPredicted RBP20.89■□□□□ 0.93
SNAP47-213ENST00000617596 C20orf194Q5TEA3 1177 aa20.88■□□□□ 0.93
SNAP47-213ENST00000617596 ERICH6BQ5W0A0 696 aa20.88■□□□□ 0.93
SNAP47-213ENST00000617596 TTC5Q8N0Z6 440 aa20.88■□□□□ 0.93
SNAP47-213ENST00000617596 ZNF496Q96IT1 587 aaPredicted RBP20.88■□□□□ 0.93
SNAP47-213ENST00000617596 KAT6BQ8WYB5 2073 aa20.87■□□□□ 0.93
SNAP47-213ENST00000617596 KCNQ2O43526 872 aa20.86■□□□□ 0.93
SNAP47-213ENST00000617596 EIF2S2P20042 333 aaKnown RBP20.86■□□□□ 0.93
SNAP47-213ENST00000617596 ASAP1Q9ULH1 1129 aa20.86■□□□□ 0.93
SNAP47-213ENST00000617596 TNNQ9UQP3 1299 aa20.86■□□□□ 0.93
SNAP47-213ENST00000617596 PTCD1O75127 700 aaKnown RBP20.86■□□□□ 0.93
SNAP47-213ENST00000617596 GIGYF1O75420 1035 aaPredicted RBP20.85■□□□□ 0.93
SNAP47-213ENST00000617596 CANXP27824 592 aaKnown RBP20.85■□□□□ 0.93
SNAP47-213ENST00000617596 ALDH1L2Q3SY69 923 aa20.85■□□□□ 0.93
SNAP47-213ENST00000617596 RBM6P78332 1123 aaKnown RBP20.84■□□□□ 0.93
SNAP47-213ENST00000617596 MRPL50Q8N5N7 158 aaKnown RBP20.84■□□□□ 0.93
SNAP47-213ENST00000617596 PTF1AQ7RTS3 328 aa20.84■□□□□ 0.93
SNAP47-213ENST00000617596 ZNF428Q96B54 188 aa20.84■□□□□ 0.93
SNAP47-213ENST00000617596 NOB1Q9ULX3 412 aaKnown RBP20.84■□□□□ 0.93
SNAP47-213ENST00000617596 BCL9O00512 1426 aa20.84■□□□□ 0.93
SNAP47-213ENST00000617596 DOT1LQ8TEK3 1739 aa20.84■□□□□ 0.93
SNAP47-213ENST00000617596 HEG1Q9ULI3 1381 aa20.83■□□□□ 0.93
SNAP47-213ENST00000617596 HDGFL1Q5TGJ6 251 aa20.83■□□□□ 0.93
SNAP47-213ENST00000617596 POTEAQ6S8J7 498 aa20.83■□□□□ 0.93
SNAP47-213ENST00000617596 ATG3Q9NT62 314 aa20.83■□□□□ 0.93
SNAP47-213ENST00000617596 EP400Q96L91 3159 aa20.83■□□□□ 0.92
SNAP47-213ENST00000617596 ITGB4P16144 1822 aa20.82■□□□□ 0.92
SNAP47-213ENST00000617596 SLC4A2P04920 1241 aa20.82■□□□□ 0.92
SNAP47-213ENST00000617596 CLUAP1Q96AJ1 413 aa20.82■□□□□ 0.92
SNAP47-213ENST00000617596 FMNL2Q96PY5 1086 aa20.82■□□□□ 0.92
SNAP47-213ENST00000617596 MSH5O43196 834 aa20.81■□□□□ 0.92
SNAP47-213ENST00000617596 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.81■□□□□ 0.92
SNAP47-213ENST00000617596 RXRBP28702 533 aa20.8■□□□□ 0.92
SNAP47-213ENST00000617596 ANXA1P04083 346 aa20.8■□□□□ 0.92
SNAP47-213ENST00000617596 CCDC30Q5VVM6 783 aa20.8■□□□□ 0.92
SNAP47-213ENST00000617596 PANK1Q8TE04 598 aa20.8■□□□□ 0.92
SNAP47-213ENST00000617596 USP16Q9Y5T5 823 aa20.8■□□□□ 0.92
SNAP47-213ENST00000617596 G2E3Q7L622 706 aa20.79■□□□□ 0.92
SNAP47-213ENST00000617596 SNRPA1P09661 255 aaKnown RBP20.78■□□□□ 0.92
SNAP47-213ENST00000617596 RBM42Q9BTD8 480 aaKnown RBP20.78■□□□□ 0.92
SNAP47-213ENST00000617596 CHPF2Q9P2E5 772 aa20.78■□□□□ 0.92
SNAP47-213ENST00000617596 KCPQ6ZWJ8 1503 aa20.78■□□□□ 0.92
SNAP47-213ENST00000617596 HOXB7P09629 217 aa20.78■□□□□ 0.92
SNAP47-213ENST00000617596 RLBP1P12271 317 aa20.78■□□□□ 0.92
SNAP47-213ENST00000617596 TRIM27P14373 513 aa20.78■□□□□ 0.92
SNAP47-213ENST00000617596 ZKSCAN2Q63HK3 967 aa20.78■□□□□ 0.92
SNAP47-213ENST00000617596 KRT27Q7Z3Y8 459 aa20.78■□□□□ 0.92
SNAP47-213ENST00000617596 STK31Q9BXU1 1019 aa20.78■□□□□ 0.92
SNAP47-213ENST00000617596 PIP4K2AP48426 406 aaPredicted RBP20.77■□□□□ 0.92
SNAP47-213ENST00000617596 PAPPAQ13219 1627 aa20.77■□□□□ 0.91
SNAP47-213ENST00000617596 SOS1Q07889 1333 aaPredicted RBP20.76■□□□□ 0.91
SNAP47-213ENST00000617596 KIF16BQ96L93 1317 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms