RNA–Protein interactions for RNA: ENST00000617462.4

CPEB1-213, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-213ENST00000617462 FLIIQ13045 1269 aa17.43■□□□□ 0.38
CPEB1-213ENST00000617462 C1orf141Q5JVX7 400 aa17.43■□□□□ 0.38
CPEB1-213ENST00000617462 PHAXQ9H814 394 aaKnown RBP17.43■□□□□ 0.38
CPEB1-213ENST00000617462 KDM6AO15550 1401 aaPredicted RBP17.42■□□□□ 0.38
CPEB1-213ENST00000617462 SCN11AQ9UI33 1791 aa17.42■□□□□ 0.38
CPEB1-213ENST00000617462 BTBD11A6QL63 1104 aa17.42■□□□□ 0.38
CPEB1-213ENST00000617462 CSB-PGBD3P0DP91 1061 aa17.42■□□□□ 0.38
CPEB1-213ENST00000617462 IPO9Q96P70 1041 aaKnown RBP17.42■□□□□ 0.38
CPEB1-213ENST00000617462 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
CPEB1-213ENST00000617462 BABAM1Q9NWV8 329 aa17.42■□□□□ 0.38
CPEB1-213ENST00000617462 NHSL1Q5SYE7 1610 aa17.42■□□□□ 0.38
CPEB1-213ENST00000617462 CPDO75976 1380 aa17.42■□□□□ 0.38
CPEB1-213ENST00000617462 ANXA1P04083 346 aa17.41■□□□□ 0.38
CPEB1-213ENST00000617462 EIF2S2P20042 333 aaKnown RBP17.41■□□□□ 0.38
CPEB1-213ENST00000617462 NUCB1Q02818 461 aa17.41■□□□□ 0.38
CPEB1-213ENST00000617462 TEFQ10587 303 aa17.41■□□□□ 0.38
CPEB1-213ENST00000617462 CCDC30Q5VVM6 783 aa17.41■□□□□ 0.38
CPEB1-213ENST00000617462 HDGFL1Q5TGJ6 251 aa17.41■□□□□ 0.38
CPEB1-213ENST00000617462 STK31Q9BXU1 1019 aa17.4■□□□□ 0.38
CPEB1-213ENST00000617462 FKBP5Q13451 457 aaPredicted RBP17.39■□□□□ 0.37
CPEB1-213ENST00000617462 RAPGEF4Q8WZA2 1011 aa17.39■□□□□ 0.37
CPEB1-213ENST00000617462 PKD1L3Q7Z443 1732 aa17.39■□□□□ 0.37
CPEB1-213ENST00000617462 CHPF2Q9P2E5 772 aa17.38■□□□□ 0.37
CPEB1-213ENST00000617462 N4BP2Q86UW6 1770 aaPredicted RBP17.38■□□□□ 0.37
CPEB1-213ENST00000617462 ABCC6O95255 1503 aa17.38■□□□□ 0.37
CPEB1-213ENST00000617462 CYP27B1O15528 508 aa17.38■□□□□ 0.37
CPEB1-213ENST00000617462 SLC39A6Q13433 755 aa17.38■□□□□ 0.37
CPEB1-213ENST00000617462 CEP85Q6P2H3 762 aa17.38■□□□□ 0.37
CPEB1-213ENST00000617462 CHD1LQ86WJ1 897 aa17.38■□□□□ 0.37
CPEB1-213ENST00000617462 C5P01031 1676 aa17.37■□□□□ 0.37
CPEB1-213ENST00000617462 PHKG2P15735 406 aa17.37■□□□□ 0.37
CPEB1-213ENST00000617462 ANKRD45Q5TZF3 282 aa17.37■□□□□ 0.37
CPEB1-213ENST00000617462 PRDM11Q9NQV5 511 aa17.37■□□□□ 0.37
CPEB1-213ENST00000617462 OVOS2A0A0G2JMS6 1433 aa17.37■□□□□ 0.37
CPEB1-213ENST00000617462 TATP17735 454 aaPredicted RBP17.36■□□□□ 0.37
CPEB1-213ENST00000617462 PROSER3Q2NL68 480 aa17.36■□□□□ 0.37
CPEB1-213ENST00000617462 NOP58Q9Y2X3 529 aaKnown RBP17.36■□□□□ 0.37
CPEB1-213ENST00000617462 COL5A2P05997 1499 aaPredicted RBP17.36■□□□□ 0.37
CPEB1-213ENST00000617462 ANKRD44Q8N8A2 993 aa17.35■□□□□ 0.37
CPEB1-213ENST00000617462 HEG1Q9ULI3 1381 aa17.35■□□□□ 0.37
CPEB1-213ENST00000617462 BCL11AQ9H165 835 aa17.35■□□□□ 0.37
CPEB1-213ENST00000617462 CHMP4BQ9H444 224 aaKnown RBP17.35■□□□□ 0.37
CPEB1-213ENST00000617462 GIGYF1O75420 1035 aaPredicted RBP17.34■□□□□ 0.37
CPEB1-213ENST00000617462 NFATC2IPQ8NCF5 419 aa17.34■□□□□ 0.37
CPEB1-213ENST00000617462 GCC1Q96CN9 775 aa17.33■□□□□ 0.37
CPEB1-213ENST00000617462 SOS1Q07889 1333 aaPredicted RBP17.33■□□□□ 0.36
CPEB1-213ENST00000617462 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.36
CPEB1-213ENST00000617462 SHANK3Q9BYB0 1731 aa17.33■□□□□ 0.36
CPEB1-213ENST00000617462 ROBO1Q9Y6N7 1651 aa17.32■□□□□ 0.36
CPEB1-213ENST00000617462 WDR17Q8IZU2 1322 aa17.32■□□□□ 0.36
CPEB1-213ENST00000617462 DCTPP1Q9H773 170 aa17.32■□□□□ 0.36
CPEB1-213ENST00000617462 SLC52A2Q9HAB3 445 aa17.32■□□□□ 0.36
CPEB1-213ENST00000617462 SLC4A3P48751 1232 aa17.32■□□□□ 0.36
CPEB1-213ENST00000617462 C16orf71Q8IYS4 520 aaPredicted RBP17.32■□□□□ 0.36
CPEB1-213ENST00000617462 SPG7Q9UQ90 795 aa17.32■□□□□ 0.36
CPEB1-213ENST00000617462 LARP1Q6PKG0 1096 aaKnown RBP17.31■□□□□ 0.36
CPEB1-213ENST00000617462 TOM1L2Q6ZVM7 507 aa17.31■□□□□ 0.36
CPEB1-213ENST00000617462 OTUD7AQ8TE49 926 aaPredicted RBP17.31■□□□□ 0.36
CPEB1-213ENST00000617462 STRN4Q9NRL3 753 aa17.31■□□□□ 0.36
CPEB1-213ENST00000617462 ADCY9O60503 1353 aa17.3■□□□□ 0.36
CPEB1-213ENST00000617462 APBB1O00213 710 aa17.3■□□□□ 0.36
CPEB1-213ENST00000617462 SMARCA5O60264 1052 aaPredicted RBP17.3■□□□□ 0.36
CPEB1-213ENST00000617462 HOXB7P09629 217 aa17.3■□□□□ 0.36
CPEB1-213ENST00000617462 IFNL2Q8IZJ0 200 aa17.3■□□□□ 0.36
CPEB1-213ENST00000617462 ANP32EQ9BTT0 268 aa17.3■□□□□ 0.36
CPEB1-213ENST00000617462 PARP4Q9UKK3 1724 aaKnown RBP17.3■□□□□ 0.36
CPEB1-213ENST00000617462 ZNF790Q6PG37 636 aa17.3■□□□□ 0.36
CPEB1-213ENST00000617462 USP44Q9H0E7 712 aa17.3■□□□□ 0.36
CPEB1-213ENST00000617462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.3■□□□□ 0.36
CPEB1-213ENST00000617462 PI4KAP2A4QPH2 592 aa17.29■□□□□ 0.36
CPEB1-213ENST00000617462 RPAP2Q8IXW5 612 aaPredicted RBP17.29■□□□□ 0.36
CPEB1-213ENST00000617462 PI4KAP1Q8N8J0 262 aa17.29■□□□□ 0.36
CPEB1-213ENST00000617462 ZBTB47Q9UFB7 747 aaPredicted RBP17.29■□□□□ 0.36
CPEB1-213ENST00000617462 GLI3P10071 1580 aa17.29■□□□□ 0.36
CPEB1-213ENST00000617462 PXDNLA1KZ92 1463 aa17.29■□□□□ 0.36
CPEB1-213ENST00000617462 MRC1P22897 1456 aa17.29■□□□□ 0.36
CPEB1-213ENST00000617462 PNMA6EA0A0J9YXQ4 647 aa17.28■□□□□ 0.36
CPEB1-213ENST00000617462 LTBP4Q8N2S1 1624 aa17.27■□□□□ 0.36
CPEB1-213ENST00000617462 PDIA6Q15084 440 aa17.27■□□□□ 0.36
CPEB1-213ENST00000617462 ZNF496Q96IT1 587 aaPredicted RBP17.27■□□□□ 0.36
CPEB1-213ENST00000617462 LRRFIP2Q9Y608 721 aaKnown RBP17.27■□□□□ 0.36
CPEB1-213ENST00000617462 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.35
CPEB1-213ENST00000617462 GNAI2P04899 355 aa17.26■□□□□ 0.35
CPEB1-213ENST00000617462 BEND3Q5T5X7 828 aa17.26■□□□□ 0.35
CPEB1-213ENST00000617462 DCAF5Q96JK2 942 aa17.26■□□□□ 0.35
CPEB1-213ENST00000617462 USP35Q9P2H5 1018 aa17.26■□□□□ 0.35
CPEB1-213ENST00000617462 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
CPEB1-213ENST00000617462 PLEKHM2Q8IWE5 1019 aa17.25■□□□□ 0.35
CPEB1-213ENST00000617462 DBF4Q9UBU7 674 aaPredicted RBP17.25■□□□□ 0.35
CPEB1-213ENST00000617462 NBPF7P0C2Y1 421 aaPredicted RBP17.25■□□□□ 0.35
CPEB1-213ENST00000617462 ERICH6Q7L0X2 663 aa17.25■□□□□ 0.35
CPEB1-213ENST00000617462 DNAAF4Q8WXU2 420 aa17.25■□□□□ 0.35
CPEB1-213ENST00000617462 EXOC6BQ9Y2D4 811 aa17.24■□□□□ 0.35
CPEB1-213ENST00000617462 COL16A1Q07092 1604 aaPredicted RBP17.24■□□□□ 0.35
CPEB1-213ENST00000617462 TOGARAM1Q9Y4F4 1720 aa17.24■□□□□ 0.35
CPEB1-213ENST00000617462 USP16Q9Y5T5 823 aa17.24■□□□□ 0.35
CPEB1-213ENST00000617462 ZCRB1Q8TBF4 217 aaKnown RBP17.23■□□□□ 0.35
CPEB1-213ENST00000617462 CARD10Q9BWT7 1032 aa17.23■□□□□ 0.35
CPEB1-213ENST00000617462 SRCIN1Q9C0H9 1055 aa17.23■□□□□ 0.35
CPEB1-213ENST00000617462 MAP3K2Q9Y2U5 619 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms