RNA–Protein interactions for RNA: ENST00000617003.1

AP3S2-216, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

BASIC

Gene AP3S2, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-216ENST00000617003 CCNL1Q9UK58 526 aaPredicted RBP21.65■■□□□ 1.06
AP3S2-216ENST00000617003 ADAMTS7Q9UKP4 1686 aa21.64■■□□□ 1.05
AP3S2-216ENST00000617003 DLG5Q8TDM6 1919 aa21.64■■□□□ 1.05
AP3S2-216ENST00000617003 ANO8Q9HCE9 1232 aaPredicted RBP21.64■■□□□ 1.05
AP3S2-216ENST00000617003 NFE2L2Q16236 605 aa21.63■■□□□ 1.05
AP3S2-216ENST00000617003 RTF1Q92541 710 aaKnown RBP21.63■■□□□ 1.05
AP3S2-216ENST00000617003 MRS2Q9HD23 443 aa21.63■■□□□ 1.05
AP3S2-216ENST00000617003 HTATSF1O43719 755 aaKnown RBP21.61■■□□□ 1.05
AP3S2-216ENST00000617003 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
AP3S2-216ENST00000617003 MCM10Q7L590 875 aa21.61■■□□□ 1.05
AP3S2-216ENST00000617003 RUNDC1Q96C34 613 aa21.61■■□□□ 1.05
AP3S2-216ENST00000617003 LOC102724428A0A0B4J2F2 783 aa21.61■■□□□ 1.05
AP3S2-216ENST00000617003 SIK1P57059 783 aa21.61■■□□□ 1.05
AP3S2-216ENST00000617003 TEFQ10587 303 aa21.61■■□□□ 1.05
AP3S2-216ENST00000617003 STK32BQ9NY57 414 aa21.61■■□□□ 1.05
AP3S2-216ENST00000617003 SLC15A2Q16348 729 aa21.6■■□□□ 1.05
AP3S2-216ENST00000617003 PNISRQ8TF01 805 aaKnown RBP21.6■■□□□ 1.05
AP3S2-216ENST00000617003 RBM42Q9BTD8 480 aaKnown RBP21.6■■□□□ 1.05
AP3S2-216ENST00000617003 CEMIPQ8WUJ3 1361 aa21.6■■□□□ 1.05
AP3S2-216ENST00000617003 MRC1P22897 1456 aa21.59■■□□□ 1.05
AP3S2-216ENST00000617003 SLC39A6Q13433 755 aa21.59■■□□□ 1.05
AP3S2-216ENST00000617003 TMPOP42166 694 aaKnown RBP21.58■■□□□ 1.05
AP3S2-216ENST00000617003 RIPK4P57078 832 aa21.58■■□□□ 1.05
AP3S2-216ENST00000617003 PTCD1O75127 700 aaKnown RBP21.57■■□□□ 1.04
AP3S2-216ENST00000617003 ATP6V1AP38606 617 aa21.57■■□□□ 1.04
AP3S2-216ENST00000617003 ZNF827Q17R98 1081 aa21.57■■□□□ 1.04
AP3S2-216ENST00000617003 SLC4A9Q96Q91 983 aa21.57■■□□□ 1.04
AP3S2-216ENST00000617003 TAF1LQ8IZX4 1826 aa21.57■■□□□ 1.04
AP3S2-216ENST00000617003 AKT1S1Q96B36 256 aa21.57■■□□□ 1.04
AP3S2-216ENST00000617003 RRP7AQ9Y3A4 280 aaKnown RBP21.57■■□□□ 1.04
AP3S2-216ENST00000617003 PAPPAQ13219 1627 aa21.56■■□□□ 1.04
AP3S2-216ENST00000617003 SIPA1L3O60292 1781 aaPredicted RBP21.56■■□□□ 1.04
AP3S2-216ENST00000617003 ITPK1Q13572 414 aa21.56■■□□□ 1.04
AP3S2-216ENST00000617003 NEUROD2Q15784 382 aa21.56■■□□□ 1.04
AP3S2-216ENST00000617003 DIEXFQ68CQ4 756 aaKnown RBP21.54■■□□□ 1.04
AP3S2-216ENST00000617003 BTBD11A6QL63 1104 aa21.53■■□□□ 1.04
AP3S2-216ENST00000617003 LINC00116Q8NCU8 138 aa21.53■■□□□ 1.04
AP3S2-216ENST00000617003 THUMPD2Q9BTF0 503 aaKnown RBP21.53■■□□□ 1.04
AP3S2-216ENST00000617003 C5P01031 1676 aa21.53■■□□□ 1.04
AP3S2-216ENST00000617003 HMGB2P26583 209 aaKnown RBP21.53■■□□□ 1.04
AP3S2-216ENST00000617003 APAF1O14727 1248 aa21.52■■□□□ 1.04
AP3S2-216ENST00000617003 TAF7Q15545 349 aaPredicted RBP21.52■■□□□ 1.04
AP3S2-216ENST00000617003 PDGFDQ9GZP0 370 aaPredicted RBP21.52■■□□□ 1.04
AP3S2-216ENST00000617003 TFCP2L1Q9NZI6 479 aa21.52■■□□□ 1.04
AP3S2-216ENST00000617003 KCNQ3O43525 872 aa21.51■■□□□ 1.03
AP3S2-216ENST00000617003 ZNF790Q6PG37 636 aa21.51■■□□□ 1.03
AP3S2-216ENST00000617003 TTC5Q8N0Z6 440 aa21.51■■□□□ 1.03
AP3S2-216ENST00000617003 ZNF831Q5JPB2 1677 aa21.49■■□□□ 1.03
AP3S2-216ENST00000617003 FAM9BQ8IZU0 186 aa21.49■■□□□ 1.03
AP3S2-216ENST00000617003 MIS18AQ9NYP9 233 aa21.49■■□□□ 1.03
AP3S2-216ENST00000617003 TRIM35Q9UPQ4 493 aa21.49■■□□□ 1.03
AP3S2-216ENST00000617003 C4BP0C0L5 1744 aa21.49■■□□□ 1.03
AP3S2-216ENST00000617003 LMOD3Q0VAK6 560 aa21.48■■□□□ 1.03
AP3S2-216ENST00000617003 ZNF496Q96IT1 587 aaPredicted RBP21.48■■□□□ 1.03
AP3S2-216ENST00000617003 TUBGCP6Q96RT7 1819 aa21.48■■□□□ 1.03
AP3S2-216ENST00000617003 AK7Q96M32 723 aa21.48■■□□□ 1.03
AP3S2-216ENST00000617003 KCPQ6ZWJ8 1503 aa21.48■■□□□ 1.03
AP3S2-216ENST00000617003 UBR2Q8IWV8 1755 aa21.47■■□□□ 1.03
AP3S2-216ENST00000617003 DNAJC10Q8IXB1 793 aa21.47■■□□□ 1.03
AP3S2-216ENST00000617003 MYH14Q7Z406 1995 aaKnown RBP21.46■■□□□ 1.03
AP3S2-216ENST00000617003 SRCAPQ6ZRS2 3230 aa21.46■■□□□ 1.03
AP3S2-216ENST00000617003 PNPLA7Q6ZV29 1317 aa21.46■■□□□ 1.03
AP3S2-216ENST00000617003 SENP3-EIF4A1A0A087X0R7 540 aa21.46■■□□□ 1.03
AP3S2-216ENST00000617003 SMIM5Q71RC9 77 aa21.46■■□□□ 1.03
AP3S2-216ENST00000617003 VSIG10Q8N0Z9 540 aa21.45■■□□□ 1.02
AP3S2-216ENST00000617003 FMNL2Q96PY5 1086 aa21.45■■□□□ 1.02
AP3S2-216ENST00000617003 COL5A3P25940 1745 aaPredicted RBP21.44■■□□□ 1.02
AP3S2-216ENST00000617003 TJP1Q07157 1748 aa21.44■■□□□ 1.02
AP3S2-216ENST00000617003 QSER1Q2KHR3 1735 aa21.44■■□□□ 1.02
AP3S2-216ENST00000617003 RC3H1Q5TC82 1133 aaKnown RBP21.44■■□□□ 1.02
AP3S2-216ENST00000617003 AMIGO3Q86WK7 504 aa21.44■■□□□ 1.02
AP3S2-216ENST00000617003 COL23A1Q86Y22 540 aaPredicted RBP21.44■■□□□ 1.02
AP3S2-216ENST00000617003 CASZ1Q86V15 1759 aa21.44■■□□□ 1.02
AP3S2-216ENST00000617003 CCER2I3L3R5 266 aa21.44■■□□□ 1.02
AP3S2-216ENST00000617003 UBR3Q6ZT12 1888 aa21.44■■□□□ 1.02
AP3S2-216ENST00000617003 HEG1Q9ULI3 1381 aa21.43■■□□□ 1.02
AP3S2-216ENST00000617003 MIER1Q8N108 512 aa21.43■■□□□ 1.02
AP3S2-216ENST00000617003 GNPATO15228 680 aa21.42■■□□□ 1.02
AP3S2-216ENST00000617003 MSH5O43196 834 aa21.42■■□□□ 1.02
AP3S2-216ENST00000617003 ZBTB7AO95365 584 aa21.42■■□□□ 1.02
AP3S2-216ENST00000617003 CYP19A1P11511 503 aaPredicted RBP21.42■■□□□ 1.02
AP3S2-216ENST00000617003 CRKLP46109 303 aaKnown RBP21.42■■□□□ 1.02
AP3S2-216ENST00000617003 CNTNAP4Q9C0A0 1308 aa21.41■■□□□ 1.02
AP3S2-216ENST00000617003 PHF14O94880 888 aa21.41■■□□□ 1.02
AP3S2-216ENST00000617003 FLAD1Q8NFF5 587 aa21.41■■□□□ 1.02
AP3S2-216ENST00000617003 INTS5Q6P9B9 1019 aaKnown RBP21.4■■□□□ 1.02
AP3S2-216ENST00000617003 ATF5Q9Y2D1 282 aaPredicted RBP21.4■■□□□ 1.02
AP3S2-216ENST00000617003 KDM3BQ7LBC6 1761 aa21.4■■□□□ 1.02
AP3S2-216ENST00000617003 CICQ96RK0 1608 aaPredicted RBP21.4■■□□□ 1.02
AP3S2-216ENST00000617003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.4■■□□□ 1.02
AP3S2-216ENST00000617003 RPS6KA4O75676 772 aa21.4■■□□□ 1.02
AP3S2-216ENST00000617003 TEX13AQ9BXU3 409 aaPredicted RBP21.4■■□□□ 1.02
AP3S2-216ENST00000617003 TSPYL4Q9UJ04 414 aa21.4■■□□□ 1.02
AP3S2-216ENST00000617003 RTCBQ9Y3I0 505 aaKnown RBP21.4■■□□□ 1.02
AP3S2-216ENST00000617003 PRAMEF22A3QJZ6 481 aa21.39■■□□□ 1.01
AP3S2-216ENST00000617003 SSFA2P28290 1259 aa21.39■■□□□ 1.01
AP3S2-216ENST00000617003 SPON1Q9HCB6 807 aa21.39■■□□□ 1.01
AP3S2-216ENST00000617003 LAS1LQ9Y4W2 734 aaKnown RBP21.39■■□□□ 1.01
AP3S2-216ENST00000617003 STARD3NLO95772 234 aa21.38■■□□□ 1.01
AP3S2-216ENST00000617003 EIF4A1P60842 406 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms