RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 N4BP2Q86UW6 1770 aaPredicted RBP15.29■□□□□ 0.04
AP003900.1-202ENST00000616952 TOGARAM1Q9Y4F4 1720 aa15.29■□□□□ 0.04
AP003900.1-202ENST00000616952 TGFB2P61812 414 aa15.29■□□□□ 0.04
AP003900.1-202ENST00000616952 WBP1LQ9NX94 342 aa15.29■□□□□ 0.04
AP003900.1-202ENST00000616952 KAT6BQ8WYB5 2073 aa15.29■□□□□ 0.04
AP003900.1-202ENST00000616952 USP47Q96K76 1375 aa15.28■□□□□ 0.04
AP003900.1-202ENST00000616952 A0A0G2JLW4 131 aa15.28■□□□□ 0.04
AP003900.1-202ENST00000616952 VEGFAP15692 232 aaPredicted RBP15.28■□□□□ 0.04
AP003900.1-202ENST00000616952 RASEFQ8IZ41 740 aa15.28■□□□□ 0.04
AP003900.1-202ENST00000616952 CFAP44Q96MT7 982 aa15.28■□□□□ 0.04
AP003900.1-202ENST00000616952 NLRP2Q9NX02 1062 aa15.28■□□□□ 0.04
AP003900.1-202ENST00000616952 AMIGO3Q86WK7 504 aa15.27■□□□□ 0.04
AP003900.1-202ENST00000616952 DDX54Q8TDD1 881 aaKnown RBP15.27■□□□□ 0.04
AP003900.1-202ENST00000616952 NFAT5O94916 1531 aa15.27■□□□□ 0.03
AP003900.1-202ENST00000616952 SOX12O15370 315 aa15.26■□□□□ 0.03
AP003900.1-202ENST00000616952 SMIM5Q71RC9 77 aa15.26■□□□□ 0.03
AP003900.1-202ENST00000616952 KCNH5Q8NCM2 988 aa15.26■□□□□ 0.03
AP003900.1-202ENST00000616952 FBXO3Q9UK99 471 aa15.26■□□□□ 0.03
AP003900.1-202ENST00000616952 NSD3Q9BZ95 1437 aa15.26■□□□□ 0.03
AP003900.1-202ENST00000616952 ZC3H4Q9UPT8 1303 aaKnown RBP15.25■□□□□ 0.03
AP003900.1-202ENST00000616952 PHF14O94880 888 aa15.25■□□□□ 0.03
AP003900.1-202ENST00000616952 C4BP0C0L5 1744 aa15.24■□□□□ 0.03
AP003900.1-202ENST00000616952 KIF12Q96FN5 646 aa15.24■□□□□ 0.03
AP003900.1-202ENST00000616952 AK7Q96M32 723 aa15.24■□□□□ 0.03
AP003900.1-202ENST00000616952 BRCA1P38398 1863 aaKnown RBP15.24■□□□□ 0.03
AP003900.1-202ENST00000616952 ARFGEF1Q9Y6D6 1849 aa15.23■□□□□ 0.03
AP003900.1-202ENST00000616952 DPEP1P16444 411 aa15.23■□□□□ 0.03
AP003900.1-202ENST00000616952 HMGB2P26583 209 aaKnown RBP15.23■□□□□ 0.03
AP003900.1-202ENST00000616952 VEGFBP49765 207 aa15.23■□□□□ 0.03
AP003900.1-202ENST00000616952 PRPF38BQ5VTL8 546 aaKnown RBP15.23■□□□□ 0.03
AP003900.1-202ENST00000616952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.22■□□□□ 0.03
AP003900.1-202ENST00000616952 MMP10P09238 476 aa15.22■□□□□ 0.03
AP003900.1-202ENST00000616952 DCAF5Q96JK2 942 aa15.21■□□□□ 0.03
AP003900.1-202ENST00000616952 TAF1LQ8IZX4 1826 aa15.21■□□□□ 0.03
AP003900.1-202ENST00000616952 UBR3Q6ZT12 1888 aa15.2■□□□□ 0.02
AP003900.1-202ENST00000616952 GLTPD2A6NH11 291 aa15.2■□□□□ 0.02
AP003900.1-202ENST00000616952 ASTLQ6HA08 431 aaPredicted RBP15.2■□□□□ 0.02
AP003900.1-202ENST00000616952 VIRMAQ69YN4 1812 aaKnown RBP15.19■□□□□ 0.02
AP003900.1-202ENST00000616952 KDM6AO15550 1401 aaPredicted RBP15.18■□□□□ 0.02
AP003900.1-202ENST00000616952 LOC105371045A0A1W2PR82 267 aa15.18■□□□□ 0.02
AP003900.1-202ENST00000616952 SSFA2P28290 1259 aa15.18■□□□□ 0.02
AP003900.1-202ENST00000616952 NUBP1P53384 320 aa15.18■□□□□ 0.02
AP003900.1-202ENST00000616952 PALLDQ8WX93 1383 aa15.18■□□□□ 0.02
AP003900.1-202ENST00000616952 ATMINO43313 823 aaPredicted RBP15.16■□□□□ 0.02
AP003900.1-202ENST00000616952 KCNA3P22001 575 aa15.16■□□□□ 0.02
AP003900.1-202ENST00000616952 SRPK2P78362 688 aaKnown RBP15.16■□□□□ 0.02
AP003900.1-202ENST00000616952 MAP2K1Q02750 393 aaPredicted RBP15.16■□□□□ 0.02
AP003900.1-202ENST00000616952 DALRD3Q5D0E6 543 aaKnown RBP15.15■□□□□ 0.02
AP003900.1-202ENST00000616952 ANKRD24Q8TF21 1146 aa15.15■□□□□ 0.02
AP003900.1-202ENST00000616952 PIM2Q9P1W9 311 aa15.15■□□□□ 0.02
AP003900.1-202ENST00000616952 POTECB2RU33 542 aa15.14■□□□□ 0.01
AP003900.1-202ENST00000616952 CCDC87Q9NVE4 849 aa15.14■□□□□ 0.01
AP003900.1-202ENST00000616952 TIAM2Q8IVF5 1701 aa15.14■□□□□ 0.01
AP003900.1-202ENST00000616952 SBF1O95248 1867 aa15.14■□□□□ 0.01
AP003900.1-202ENST00000616952 MAP3K13O43283 966 aa15.13■□□□□ 0.01
AP003900.1-202ENST00000616952 RASSF7Q02833 373 aa15.13■□□□□ 0.01
AP003900.1-202ENST00000616952 MCOLN1Q9GZU1 580 aa15.13■□□□□ 0.01
AP003900.1-202ENST00000616952 PASKQ96RG2 1323 aa15.13■□□□□ 0.01
AP003900.1-202ENST00000616952 C4AP0C0L4 1744 aa15.12■□□□□ 0.01
AP003900.1-202ENST00000616952 FAM212AQ96EL1 285 aa15.12■□□□□ 0.01
AP003900.1-202ENST00000616952 CABP1Q9NZU7 370 aa15.12■□□□□ 0.01
AP003900.1-202ENST00000616952 CABP2Q9NPB3 220 aa15.11■□□□□ 0.01
AP003900.1-202ENST00000616952 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
AP003900.1-202ENST00000616952 TMEM88BA6NKF7 163 aa15.1■□□□□ 0.01
AP003900.1-202ENST00000616952 LMNB1P20700 586 aa15.1■□□□□ 0.01
AP003900.1-202ENST00000616952 SLC39A7Q92504 469 aa15.1■□□□□ 0.01
AP003900.1-202ENST00000616952 THSD7BQ9C0I4 1608 aa15.1■□□□□ 0.01
AP003900.1-202ENST00000616952 POTEJP0CG39 1038 aa15.09■□□□□ 0.01
AP003900.1-202ENST00000616952 C7P10643 843 aa15.09■□□□□ 0.01
AP003900.1-202ENST00000616952 RASSF10A6NK89 507 aa15.08■□□□□ 0
AP003900.1-202ENST00000616952 GNPATO15228 680 aa15.08■□□□□ 0
AP003900.1-202ENST00000616952 METRNQ9UJH8 293 aa15.08■□□□□ 0
AP003900.1-202ENST00000616952 TTC21AQ8NDW8 1320 aa15.08■□□□□ 0
AP003900.1-202ENST00000616952 FAM208AQ9UK61 1670 aaKnown RBP15.07■□□□□ 0
AP003900.1-202ENST00000616952 LTN1O94822 1766 aa15.07■□□□□ 0
AP003900.1-202ENST00000616952 ZCRB1Q8TBF4 217 aaKnown RBP15.07■□□□□ 0
AP003900.1-202ENST00000616952 MPHOSPH9Q99550 1183 aa15.07■□□□□ 0
AP003900.1-202ENST00000616952 MEGF6O75095 1541 aa15.07■□□□□ 0
AP003900.1-202ENST00000616952 NLGN1Q8N2Q7 840 aa15.06■□□□□ 0
AP003900.1-202ENST00000616952 LINC00116Q8NCU8 138 aa15.06■□□□□ 0
AP003900.1-202ENST00000616952 BEGAINQ9BUH8 593 aa15.06■□□□□ 0
AP003900.1-202ENST00000616952 WDR33Q9C0J8 1336 aaKnown RBP15.06■□□□□ 0
AP003900.1-202ENST00000616952 TIE1P35590 1138 aa15.05■□□□□ -0
AP003900.1-202ENST00000616952 GCC1Q96CN9 775 aa15.05■□□□□ -0
AP003900.1-202ENST00000616952 BMP2KQ9NSY1 1161 aaPredicted RBP15.05■□□□□ -0
AP003900.1-202ENST00000616952 LTBP1Q14766 1721 aa15.05■□□□□ -0
AP003900.1-202ENST00000616952 ATN1P54259 1190 aaPredicted RBP15.04■□□□□ -0
AP003900.1-202ENST00000616952 SOX10P56693 466 aa15.04■□□□□ -0
AP003900.1-202ENST00000616952 TMF1P82094 1093 aa15.04■□□□□ -0
AP003900.1-202ENST00000616952 DEFB115Q30KQ5 88 aa15.04■□□□□ -0
AP003900.1-202ENST00000616952 DPY19L2Q6NUT2 758 aa15.04■□□□□ -0
AP003900.1-202ENST00000616952 PARP3Q9Y6F1 533 aa15.04■□□□□ -0
AP003900.1-202ENST00000616952 VASPP50552 380 aaPredicted RBP15.03■□□□□ -0
AP003900.1-202ENST00000616952 SMARCC1Q92922 1105 aaPredicted RBP15.03■□□□□ -0
AP003900.1-202ENST00000616952 TSKSQ9UJT2 592 aa15.03■□□□□ -0
AP003900.1-202ENST00000616952 KDM2AQ9Y2K7 1162 aa15.03■□□□□ -0
AP003900.1-202ENST00000616952 POTEB2H3BUK9 544 aa15.02■□□□□ -0
AP003900.1-202ENST00000616952 CHRNA5P30532 468 aa15.02■□□□□ -0
AP003900.1-202ENST00000616952 MPRIPQ6WCQ1 1025 aa15.02■□□□□ -0
AP003900.1-202ENST00000616952 TRPC6Q9Y210 931 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms