RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 QTRT2Q9H974 415 aaKnown RBP19.69■□□□□ 0.74
CBWD1-225ENST00000616944 KAT6BQ8WYB5 2073 aa19.68■□□□□ 0.74
CBWD1-225ENST00000616944 TEFQ10587 303 aa19.68■□□□□ 0.74
CBWD1-225ENST00000616944 SLC52A2Q9HAB3 445 aa19.68■□□□□ 0.74
CBWD1-225ENST00000616944 ONECUT3O60422 494 aaPredicted RBP19.67■□□□□ 0.74
CBWD1-225ENST00000616944 CT47B1P0C2W7 299 aaPredicted RBP19.67■□□□□ 0.74
CBWD1-225ENST00000616944 ILDR2Q71H61 639 aa19.67■□□□□ 0.74
CBWD1-225ENST00000616944 MIS18AQ9NYP9 233 aa19.67■□□□□ 0.74
CBWD1-225ENST00000616944 TSPYL4Q9UJ04 414 aa19.67■□□□□ 0.74
CBWD1-225ENST00000616944 RCAN3Q9UKA8 241 aa19.67■□□□□ 0.74
CBWD1-225ENST00000616944 BRWD3Q6RI45 1802 aa19.67■□□□□ 0.74
CBWD1-225ENST00000616944 RNF123Q5XPI4 1314 aa19.66■□□□□ 0.74
CBWD1-225ENST00000616944 ERVV-2B6SEH9 535 aa19.65■□□□□ 0.74
CBWD1-225ENST00000616944 CACNA1FO60840 1977 aa19.64■□□□□ 0.74
CBWD1-225ENST00000616944 MARCH10Q8NA82 808 aaPredicted RBP19.64■□□□□ 0.73
CBWD1-225ENST00000616944 TSPYL6Q8N831 410 aa19.63■□□□□ 0.73
CBWD1-225ENST00000616944 C8orf58Q8NAV2 365 aa19.63■□□□□ 0.73
CBWD1-225ENST00000616944 NFATC2IPQ8NCF5 419 aa19.63■□□□□ 0.73
CBWD1-225ENST00000616944 SBF2Q86WG5 1849 aa19.63■□□□□ 0.73
CBWD1-225ENST00000616944 C5P01031 1676 aa19.63■□□□□ 0.73
CBWD1-225ENST00000616944 BTBD11A6QL63 1104 aa19.62■□□□□ 0.73
CBWD1-225ENST00000616944 SUPT16HQ9Y5B9 1047 aaKnown RBP19.62■□□□□ 0.73
CBWD1-225ENST00000616944 RXRBP28702 533 aa19.62■□□□□ 0.73
CBWD1-225ENST00000616944 RBM6P78332 1123 aaKnown RBP19.62■□□□□ 0.73
CBWD1-225ENST00000616944 KRT24Q2M2I5 525 aa19.62■□□□□ 0.73
CBWD1-225ENST00000616944 HEG1Q9ULI3 1381 aa19.61■□□□□ 0.73
CBWD1-225ENST00000616944 RGS12O14924 1447 aa19.61■□□□□ 0.73
CBWD1-225ENST00000616944 VAMP4O75379 141 aa19.61■□□□□ 0.73
CBWD1-225ENST00000616944 RARSP54136 660 aaKnown RBP19.61■□□□□ 0.73
CBWD1-225ENST00000616944 CABP4P57796 275 aa19.61■□□□□ 0.73
CBWD1-225ENST00000616944 TWISTNBQ3B726 338 aaPredicted RBP19.6■□□□□ 0.73
CBWD1-225ENST00000616944 ZNF428Q96B54 188 aa19.6■□□□□ 0.73
CBWD1-225ENST00000616944 LAMB4A4D0S4 1761 aa19.6■□□□□ 0.73
CBWD1-225ENST00000616944 EP400Q96L91 3159 aa19.59■□□□□ 0.73
CBWD1-225ENST00000616944 KCPQ6ZWJ8 1503 aa19.59■□□□□ 0.73
CBWD1-225ENST00000616944 BCL9O00512 1426 aa19.59■□□□□ 0.73
CBWD1-225ENST00000616944 KCNQ3O43525 872 aa19.59■□□□□ 0.73
CBWD1-225ENST00000616944 EIF4A1P60842 406 aaKnown RBP19.59■□□□□ 0.73
CBWD1-225ENST00000616944 NHSQ6T4R5 1651 aa19.59■□□□□ 0.73
CBWD1-225ENST00000616944 ZNF790Q6PG37 636 aa19.58■□□□□ 0.73
CBWD1-225ENST00000616944 SOS1Q07889 1333 aaPredicted RBP19.58■□□□□ 0.72
CBWD1-225ENST00000616944 SEPT12Q8IYM1 358 aa19.57■□□□□ 0.72
CBWD1-225ENST00000616944 ELL2O00472 640 aaPredicted RBP19.56■□□□□ 0.72
CBWD1-225ENST00000616944 BCAR3O75815 825 aa19.56■□□□□ 0.72
CBWD1-225ENST00000616944 SLC39A6Q13433 755 aa19.56■□□□□ 0.72
CBWD1-225ENST00000616944 A0A0G2JS52 829 aa19.55■□□□□ 0.72
CBWD1-225ENST00000616944 RRP1P56182 461 aaKnown RBP19.55■□□□□ 0.72
CBWD1-225ENST00000616944 MYT1Q01538 1121 aa19.55■□□□□ 0.72
CBWD1-225ENST00000616944 ALDH1L2Q3SY69 923 aa19.55■□□□□ 0.72
CBWD1-225ENST00000616944 SSH1Q8WYL5 1049 aa19.55■□□□□ 0.72
CBWD1-225ENST00000616944 TMOD3Q9NYL9 352 aa19.55■□□□□ 0.72
CBWD1-225ENST00000616944 HOXB7P09629 217 aa19.54■□□□□ 0.72
CBWD1-225ENST00000616944 PIGBQ92521 554 aa19.54■□□□□ 0.72
CBWD1-225ENST00000616944 BTAF1O14981 1849 aa19.54■□□□□ 0.72
CBWD1-225ENST00000616944 CICQ96RK0 1608 aaPredicted RBP19.54■□□□□ 0.72
CBWD1-225ENST00000616944 BRPF1P55201 1214 aaPredicted RBP19.54■□□□□ 0.72
CBWD1-225ENST00000616944 GIGYF1O75420 1035 aaPredicted RBP19.52■□□□□ 0.72
CBWD1-225ENST00000616944 ZNF496Q96IT1 587 aaPredicted RBP19.52■□□□□ 0.72
CBWD1-225ENST00000616944 BCL2L13Q9BXK5 485 aa19.52■□□□□ 0.72
CBWD1-225ENST00000616944 PRIM1P49642 420 aaKnown RBP19.51■□□□□ 0.71
CBWD1-225ENST00000616944 TTC5Q8N0Z6 440 aa19.51■□□□□ 0.71
CBWD1-225ENST00000616944 ZNF831Q5JPB2 1677 aa19.51■□□□□ 0.71
CBWD1-225ENST00000616944 SMC4Q9NTJ3 1288 aa19.51■□□□□ 0.71
CBWD1-225ENST00000616944 TJP1Q07157 1748 aa19.5■□□□□ 0.71
CBWD1-225ENST00000616944 MRPL50Q8N5N7 158 aaKnown RBP19.49■□□□□ 0.71
CBWD1-225ENST00000616944 ACSBG1Q96GR2 724 aa19.49■□□□□ 0.71
CBWD1-225ENST00000616944 FMNL2Q96PY5 1086 aa19.49■□□□□ 0.71
CBWD1-225ENST00000616944 ATG3Q9NT62 314 aa19.49■□□□□ 0.71
CBWD1-225ENST00000616944 ASAP1Q9ULH1 1129 aa19.49■□□□□ 0.71
CBWD1-225ENST00000616944 PLIN1O60240 522 aa19.48■□□□□ 0.71
CBWD1-225ENST00000616944 SYTL4Q96C24 671 aaPredicted RBP19.48■□□□□ 0.71
CBWD1-225ENST00000616944 PRAMEF22A3QJZ6 481 aa19.47■□□□□ 0.71
CBWD1-225ENST00000616944 KIF16BQ96L93 1317 aa19.47■□□□□ 0.71
CBWD1-225ENST00000616944 LY75O60449 1722 aa19.47■□□□□ 0.71
CBWD1-225ENST00000616944 KCNQ2O43526 872 aa19.47■□□□□ 0.71
CBWD1-225ENST00000616944 FAM182BQ5T319 152 aa19.47■□□□□ 0.71
CBWD1-225ENST00000616944 N4BP2Q86UW6 1770 aaPredicted RBP19.46■□□□□ 0.71
CBWD1-225ENST00000616944 HDGFL1Q5TGJ6 251 aa19.46■□□□□ 0.71
CBWD1-225ENST00000616944 CCDC30Q5VVM6 783 aa19.46■□□□□ 0.71
CBWD1-225ENST00000616944 KRT27Q7Z3Y8 459 aa19.46■□□□□ 0.71
CBWD1-225ENST00000616944 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.46■□□□□ 0.71
CBWD1-225ENST00000616944 COL5A3P25940 1745 aaPredicted RBP19.45■□□□□ 0.7
CBWD1-225ENST00000616944 TCERG1O14776 1098 aaKnown RBP19.45■□□□□ 0.7
CBWD1-225ENST00000616944 SNRPA1P09661 255 aaKnown RBP19.45■□□□□ 0.7
CBWD1-225ENST00000616944 VSIG10Q8N0Z9 540 aa19.43■□□□□ 0.7
CBWD1-225ENST00000616944 CHMP4AQ9BY43 222 aa19.43■□□□□ 0.7
CBWD1-225ENST00000616944 PTCD1O75127 700 aaKnown RBP19.43■□□□□ 0.7
CBWD1-225ENST00000616944 IRX6P78412 446 aaPredicted RBP19.43■□□□□ 0.7
CBWD1-225ENST00000616944 C20orf194Q5TEA3 1177 aa19.43■□□□□ 0.7
CBWD1-225ENST00000616944 PTF1AQ7RTS3 328 aa19.43■□□□□ 0.7
CBWD1-225ENST00000616944 FRAT1Q92837 279 aaPredicted RBP19.43■□□□□ 0.7
CBWD1-225ENST00000616944 NOB1Q9ULX3 412 aaKnown RBP19.43■□□□□ 0.7
CBWD1-225ENST00000616944 RREB1Q92766 1687 aa19.42■□□□□ 0.7
CBWD1-225ENST00000616944 NEFLP07196 543 aa19.42■□□□□ 0.7
CBWD1-225ENST00000616944 ZKSCAN2Q63HK3 967 aa19.42■□□□□ 0.7
CBWD1-225ENST00000616944 ARHGAP45Q92619 1136 aa19.42■□□□□ 0.7
CBWD1-225ENST00000616944 NECTIN2Q92692 538 aa19.42■□□□□ 0.7
CBWD1-225ENST00000616944 SLC4A9Q96Q91 983 aa19.42■□□□□ 0.7
CBWD1-225ENST00000616944 STK31Q9BXU1 1019 aa19.42■□□□□ 0.7
CBWD1-225ENST00000616944 GTF3C3Q9Y5Q9 886 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms