RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PHKG2P15735 406 aa20.15■□□□□ 0.82
UBXN1-218ENST00000616865 SMIM5Q71RC9 77 aa20.15■□□□□ 0.82
UBXN1-218ENST00000616865 IFNL2Q8IZJ0 200 aa20.15■□□□□ 0.82
UBXN1-218ENST00000616865 ZNF831Q5JPB2 1677 aa20.15■□□□□ 0.82
UBXN1-218ENST00000616865 IGSF1Q8N6C5 1336 aa20.14■□□□□ 0.81
UBXN1-218ENST00000616865 COL5A3P25940 1745 aaPredicted RBP20.13■□□□□ 0.81
UBXN1-218ENST00000616865 KDRP35968 1356 aa20.13■□□□□ 0.81
UBXN1-218ENST00000616865 ITPK1Q13572 414 aa20.13■□□□□ 0.81
UBXN1-218ENST00000616865 ASAP1Q9ULH1 1129 aa20.13■□□□□ 0.81
UBXN1-218ENST00000616865 KIF13BQ9NQT8 1826 aa20.13■□□□□ 0.81
UBXN1-218ENST00000616865 GNPATO15228 680 aa20.12■□□□□ 0.81
UBXN1-218ENST00000616865 EIF4A2Q14240 407 aaKnown RBP20.12■□□□□ 0.81
UBXN1-218ENST00000616865 KIAA1551Q9HCM1 1747 aa20.12■□□□□ 0.81
UBXN1-218ENST00000616865 CICQ96RK0 1608 aaPredicted RBP20.12■□□□□ 0.81
UBXN1-218ENST00000616865 ATP6V1AP38606 617 aa20.11■□□□□ 0.81
UBXN1-218ENST00000616865 CNGB1Q14028 1251 aaPredicted RBP20.1■□□□□ 0.81
UBXN1-218ENST00000616865 ATG3Q9NT62 314 aa20.1■□□□□ 0.81
UBXN1-218ENST00000616865 IFFO2Q5TF58 517 aa20.09■□□□□ 0.81
UBXN1-218ENST00000616865 GPBP1L1Q9HC44 474 aaPredicted RBP20.09■□□□□ 0.81
UBXN1-218ENST00000616865 CEP350Q5VT06 3117 aa20.08■□□□□ 0.81
UBXN1-218ENST00000616865 TNNT2P45379 298 aaPredicted RBP20.08■□□□□ 0.81
UBXN1-218ENST00000616865 WWC3Q9ULE0 1092 aa20.08■□□□□ 0.81
UBXN1-218ENST00000616865 C4AP0C0L4 1744 aa20.07■□□□□ 0.8
UBXN1-218ENST00000616865 PXDNLA1KZ92 1463 aa20.06■□□□□ 0.8
UBXN1-218ENST00000616865 N4BP2Q86UW6 1770 aaPredicted RBP20.06■□□□□ 0.8
UBXN1-218ENST00000616865 PER1O15534 1290 aaPredicted RBP20.06■□□□□ 0.8
UBXN1-218ENST00000616865 KDM6AO15550 1401 aaPredicted RBP20.05■□□□□ 0.8
UBXN1-218ENST00000616865 CC2D1BQ5T0F9 858 aaKnown RBP20.05■□□□□ 0.8
UBXN1-218ENST00000616865 ERVV-2B6SEH9 535 aa20.04■□□□□ 0.8
UBXN1-218ENST00000616865 MMP10P09238 476 aa20.04■□□□□ 0.8
UBXN1-218ENST00000616865 SLC4A9Q96Q91 983 aa20.04■□□□□ 0.8
UBXN1-218ENST00000616865 C10orf71Q711Q0 1435 aa20.03■□□□□ 0.8
UBXN1-218ENST00000616865 HSP90AB1P08238 724 aaKnown RBP20.03■□□□□ 0.8
UBXN1-218ENST00000616865 MORC1Q86VD1 984 aa20.03■□□□□ 0.8
UBXN1-218ENST00000616865 ZNF526Q8TF50 670 aaPredicted RBP20.03■□□□□ 0.8
UBXN1-218ENST00000616865 DCAF5Q96JK2 942 aa20.03■□□□□ 0.8
UBXN1-218ENST00000616865 RTCBQ9Y3I0 505 aaKnown RBP20.03■□□□□ 0.8
UBXN1-218ENST00000616865 BRCA1P38398 1863 aaKnown RBP20.03■□□□□ 0.8
UBXN1-218ENST00000616865 AMER1Q5JTC6 1135 aaPredicted RBP20.02■□□□□ 0.8
UBXN1-218ENST00000616865 CNTNAP4Q9C0A0 1308 aa20.02■□□□□ 0.79
UBXN1-218ENST00000616865 MYH14Q7Z406 1995 aaKnown RBP20.01■□□□□ 0.79
UBXN1-218ENST00000616865 ADRA2BP18089 450 aa20.01■□□□□ 0.79
UBXN1-218ENST00000616865 PLEKHO1Q53GL0 409 aaPredicted RBP20.01■□□□□ 0.79
UBXN1-218ENST00000616865 TRAPPC3LQ5T215 181 aa20.01■□□□□ 0.79
UBXN1-218ENST00000616865 RBM42Q9BTD8 480 aaKnown RBP20.01■□□□□ 0.79
UBXN1-218ENST00000616865 TJP1Q07157 1748 aa20.01■□□□□ 0.79
UBXN1-218ENST00000616865 NPC1L1Q9UHC9 1359 aa20■□□□□ 0.79
UBXN1-218ENST00000616865 RC3H1Q5TC82 1133 aaKnown RBP20■□□□□ 0.79
UBXN1-218ENST00000616865 ZNF530Q6P9A1 599 aaPredicted RBP20■□□□□ 0.79
UBXN1-218ENST00000616865 NLGN1Q8N2Q7 840 aa20■□□□□ 0.79
UBXN1-218ENST00000616865 SCN11AQ9UI33 1791 aa19.99■□□□□ 0.79
UBXN1-218ENST00000616865 AMOTQ4VCS5 1084 aa19.99■□□□□ 0.79
UBXN1-218ENST00000616865 DIEXFQ68CQ4 756 aaKnown RBP19.99■□□□□ 0.79
UBXN1-218ENST00000616865 ANP32CO43423 234 aa19.98■□□□□ 0.79
UBXN1-218ENST00000616865 CABP4P57796 275 aa19.98■□□□□ 0.79
UBXN1-218ENST00000616865 TGFB2P61812 414 aa19.98■□□□□ 0.79
UBXN1-218ENST00000616865 ARHGEF1Q92888 912 aaKnown RBP19.98■□□□□ 0.79
UBXN1-218ENST00000616865 GYS1P13807 737 aa19.97■□□□□ 0.79
UBXN1-218ENST00000616865 HSPA6P17066 643 aa19.97■□□□□ 0.79
UBXN1-218ENST00000616865 AEBP1Q8IUX7 1158 aa19.97■□□□□ 0.79
UBXN1-218ENST00000616865 RPS6KA4O75676 772 aa19.96■□□□□ 0.79
UBXN1-218ENST00000616865 CCDC87Q9NVE4 849 aa19.96■□□□□ 0.79
UBXN1-218ENST00000616865 ARFGEF1Q9Y6D6 1849 aa19.96■□□□□ 0.79
UBXN1-218ENST00000616865 KIF3CO14782 793 aa19.95■□□□□ 0.78
UBXN1-218ENST00000616865 RFC4P35249 363 aa19.95■□□□□ 0.78
UBXN1-218ENST00000616865 MTHFSP49914 203 aa19.95■□□□□ 0.78
UBXN1-218ENST00000616865 BCS1LQ9Y276 419 aa19.95■□□□□ 0.78
UBXN1-218ENST00000616865 ADAMTS7Q9UKP4 1686 aa19.94■□□□□ 0.78
UBXN1-218ENST00000616865 C1orf141Q5JVX7 400 aa19.94■□□□□ 0.78
UBXN1-218ENST00000616865 VIRMAQ69YN4 1812 aaKnown RBP19.94■□□□□ 0.78
UBXN1-218ENST00000616865 A0A0G2JLW4 131 aa19.93■□□□□ 0.78
UBXN1-218ENST00000616865 RALBP1Q15311 655 aa19.93■□□□□ 0.78
UBXN1-218ENST00000616865 PARP3Q9Y6F1 533 aa19.93■□□□□ 0.78
UBXN1-218ENST00000616865 PTCD1O75127 700 aaKnown RBP19.92■□□□□ 0.78
UBXN1-218ENST00000616865 DPEP1P16444 411 aa19.91■□□□□ 0.78
UBXN1-218ENST00000616865 CRKLP46109 303 aaKnown RBP19.91■□□□□ 0.78
UBXN1-218ENST00000616865 SULT6B1Q6IMI4 303 aa19.91■□□□□ 0.78
UBXN1-218ENST00000616865 NFATC2IPQ8NCF5 419 aa19.91■□□□□ 0.78
UBXN1-218ENST00000616865 USP42Q9H9J4 1324 aaKnown RBP19.9■□□□□ 0.78
UBXN1-218ENST00000616865 MRC1P22897 1456 aa19.9■□□□□ 0.78
UBXN1-218ENST00000616865 FCHSD2O94868 740 aa19.89■□□□□ 0.77
UBXN1-218ENST00000616865 PRKRIP1Q9H875 184 aaPredicted RBP19.89■□□□□ 0.77
UBXN1-218ENST00000616865 IL13P35225 146 aa19.88■□□□□ 0.77
UBXN1-218ENST00000616865 ARHGAP27Q6ZUM4 889 aa19.88■□□□□ 0.77
UBXN1-218ENST00000616865 SRP68Q9UHB9 627 aaKnown RBP19.88■□□□□ 0.77
UBXN1-218ENST00000616865 KCNA3P22001 575 aa19.87■□□□□ 0.77
UBXN1-218ENST00000616865 DDR1Q08345 913 aa19.86■□□□□ 0.77
UBXN1-218ENST00000616865 FKBP8Q14318 412 aa19.86■□□□□ 0.77
UBXN1-218ENST00000616865 MYBBP1AQ9BQG0 1328 aaKnown RBP19.85■□□□□ 0.77
UBXN1-218ENST00000616865 PPP2R1AP30153 589 aa19.85■□□□□ 0.77
UBXN1-218ENST00000616865 AKAP4Q5JQC9 854 aa19.85■□□□□ 0.77
UBXN1-218ENST00000616865 KCPQ6ZWJ8 1503 aa19.85■□□□□ 0.77
UBXN1-218ENST00000616865 AFDNP55196 1824 aaKnown RBP19.84■□□□□ 0.77
UBXN1-218ENST00000616865 TOMM70O94826 608 aa19.84■□□□□ 0.77
UBXN1-218ENST00000616865 INTS5Q6P9B9 1019 aaKnown RBP19.84■□□□□ 0.77
UBXN1-218ENST00000616865 SLC52A2Q9HAB3 445 aa19.84■□□□□ 0.77
UBXN1-218ENST00000616865 PIM2Q9P1W9 311 aa19.84■□□□□ 0.77
UBXN1-218ENST00000616865 UBR2Q8IWV8 1755 aa19.83■□□□□ 0.77
UBXN1-218ENST00000616865 NRXN2Q9P2S2 1712 aa19.83■□□□□ 0.77
UBXN1-218ENST00000616865 DLEC1Q9Y238 1755 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms