RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 NLRP2Q9NX02 1062 aa19.5■□□□□ 0.71
SEMA3B-212ENST00000616701 CCDC30Q5VVM6 783 aa19.5■□□□□ 0.71
SEMA3B-212ENST00000616701 PXDNQ92626 1479 aa19.49■□□□□ 0.71
SEMA3B-212ENST00000616701 LRRC37A3O60309 1634 aa19.49■□□□□ 0.71
SEMA3B-212ENST00000616701 TEFQ10587 303 aa19.49■□□□□ 0.71
SEMA3B-212ENST00000616701 FLIIQ13045 1269 aa19.49■□□□□ 0.71
SEMA3B-212ENST00000616701 RGPD5Q99666 1765 aa19.49■□□□□ 0.71
SEMA3B-212ENST00000616701 MED1Q15648 1581 aaPredicted RBP19.48■□□□□ 0.71
SEMA3B-212ENST00000616701 HDGFL1Q5TGJ6 251 aa19.48■□□□□ 0.71
SEMA3B-212ENST00000616701 KIF1AQ12756 1690 aa19.48■□□□□ 0.71
SEMA3B-212ENST00000616701 C1orf141Q5JVX7 400 aa19.48■□□□□ 0.71
SEMA3B-212ENST00000616701 VIRMAQ69YN4 1812 aaKnown RBP19.48■□□□□ 0.71
SEMA3B-212ENST00000616701 AKAP4Q5JQC9 854 aa19.47■□□□□ 0.71
SEMA3B-212ENST00000616701 ZNF335Q9H4Z2 1342 aaPredicted RBP19.47■□□□□ 0.71
SEMA3B-212ENST00000616701 ANXA1P04083 346 aa19.47■□□□□ 0.71
SEMA3B-212ENST00000616701 CSB-PGBD3P0DP91 1061 aa19.47■□□□□ 0.71
SEMA3B-212ENST00000616701 GCC1Q96CN9 775 aa19.47■□□□□ 0.71
SEMA3B-212ENST00000616701 PHAXQ9H814 394 aaKnown RBP19.47■□□□□ 0.71
SEMA3B-212ENST00000616701 BTBD11A6QL63 1104 aa19.47■□□□□ 0.71
SEMA3B-212ENST00000616701 ERBB3P21860 1342 aa19.47■□□□□ 0.71
SEMA3B-212ENST00000616701 CEMIPQ8WUJ3 1361 aa19.46■□□□□ 0.71
SEMA3B-212ENST00000616701 MFAP1P55081 439 aaKnown RBP19.46■□□□□ 0.71
SEMA3B-212ENST00000616701 NPHP3Q7Z494 1330 aa19.46■□□□□ 0.71
SEMA3B-212ENST00000616701 CEP85Q6P2H3 762 aa19.45■□□□□ 0.7
SEMA3B-212ENST00000616701 RNMTO43148 476 aaKnown RBP19.45■□□□□ 0.7
SEMA3B-212ENST00000616701 EIF4A1P60842 406 aaKnown RBP19.45■□□□□ 0.7
SEMA3B-212ENST00000616701 AMOTQ4VCS5 1084 aa19.44■□□□□ 0.7
SEMA3B-212ENST00000616701 ANKRD44Q8N8A2 993 aa19.44■□□□□ 0.7
SEMA3B-212ENST00000616701 ALS2Q96Q42 1657 aa19.44■□□□□ 0.7
SEMA3B-212ENST00000616701 C16orf71Q8IYS4 520 aaPredicted RBP19.44■□□□□ 0.7
SEMA3B-212ENST00000616701 PHRF1Q9P1Y6 1649 aaKnown RBP19.43■□□□□ 0.7
SEMA3B-212ENST00000616701 SMARCA5O60264 1052 aaPredicted RBP19.43■□□□□ 0.7
SEMA3B-212ENST00000616701 BRINP3Q76B58 766 aa19.43■□□□□ 0.7
SEMA3B-212ENST00000616701 ATP10DQ9P241 1426 aa19.43■□□□□ 0.7
SEMA3B-212ENST00000616701 UPF2Q9HAU5 1272 aaKnown RBP19.42■□□□□ 0.7
SEMA3B-212ENST00000616701 PRAMEF22A3QJZ6 481 aa19.42■□□□□ 0.7
SEMA3B-212ENST00000616701 CHPF2Q9P2E5 772 aa19.42■□□□□ 0.7
SEMA3B-212ENST00000616701 CCT4P50991 539 aaKnown RBP19.41■□□□□ 0.7
SEMA3B-212ENST00000616701 RAPGEF4Q8WZA2 1011 aa19.41■□□□□ 0.7
SEMA3B-212ENST00000616701 DCCP43146 1447 aa19.41■□□□□ 0.7
SEMA3B-212ENST00000616701 DCTPP1Q9H773 170 aa19.41■□□□□ 0.7
SEMA3B-212ENST00000616701 LMTK3Q96Q04 1460 aa19.41■□□□□ 0.7
SEMA3B-212ENST00000616701 OTUD7AQ8TE49 926 aaPredicted RBP19.41■□□□□ 0.7
SEMA3B-212ENST00000616701 BABAM1Q9NWV8 329 aa19.41■□□□□ 0.7
SEMA3B-212ENST00000616701 TNS3Q68CZ2 1445 aa19.4■□□□□ 0.7
SEMA3B-212ENST00000616701 SPATA31A3Q5VYP0 1347 aa19.4■□□□□ 0.7
SEMA3B-212ENST00000616701 FAM208AQ9UK61 1670 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-212ENST00000616701 RPAP2Q8IXW5 612 aaPredicted RBP19.39■□□□□ 0.7
SEMA3B-212ENST00000616701 SLC39A6Q13433 755 aa19.38■□□□□ 0.69
SEMA3B-212ENST00000616701 TBC1D32Q96NH3 1257 aa19.38■□□□□ 0.69
SEMA3B-212ENST00000616701 XIRP1Q702N8 1843 aaKnown RBP19.38■□□□□ 0.69
SEMA3B-212ENST00000616701 STRCQ7RTU9 1775 aa19.37■□□□□ 0.69
SEMA3B-212ENST00000616701 NCAPD2Q15021 1401 aa19.37■□□□□ 0.69
SEMA3B-212ENST00000616701 NCOA3Q9Y6Q9 1424 aa19.37■□□□□ 0.69
SEMA3B-212ENST00000616701 TATP17735 454 aaPredicted RBP19.37■□□□□ 0.69
SEMA3B-212ENST00000616701 SLAIN2Q9P270 581 aa19.37■□□□□ 0.69
SEMA3B-212ENST00000616701 LMO7Q8WWI1 1683 aa19.36■□□□□ 0.69
SEMA3B-212ENST00000616701 GNAI2P04899 355 aa19.36■□□□□ 0.69
SEMA3B-212ENST00000616701 PROSER3Q2NL68 480 aa19.35■□□□□ 0.69
SEMA3B-212ENST00000616701 EXOC6BQ9Y2D4 811 aa19.35■□□□□ 0.69
SEMA3B-212ENST00000616701 LRRFIP2Q9Y608 721 aaKnown RBP19.35■□□□□ 0.69
SEMA3B-212ENST00000616701 PLEKHM2Q8IWE5 1019 aa19.35■□□□□ 0.69
SEMA3B-212ENST00000616701 C22orf23Q9BZE7 217 aa19.35■□□□□ 0.69
SEMA3B-212ENST00000616701 HSP90AA2PQ14568 343 aaPredicted RBP19.35■□□□□ 0.69
SEMA3B-212ENST00000616701 MEGF6O75095 1541 aa19.35■□□□□ 0.69
SEMA3B-212ENST00000616701 PNMA6EA0A0J9YXQ4 647 aa19.34■□□□□ 0.69
SEMA3B-212ENST00000616701 PI4KAP2A4QPH2 592 aa19.34■□□□□ 0.69
SEMA3B-212ENST00000616701 BMP2KLQ5H9B9 411 aa19.34■□□□□ 0.69
SEMA3B-212ENST00000616701 PI4KAP1Q8N8J0 262 aa19.34■□□□□ 0.69
SEMA3B-212ENST00000616701 GSPT1P15170 499 aaKnown RBP19.33■□□□□ 0.69
SEMA3B-212ENST00000616701 NFATC2IPQ8NCF5 419 aa19.33■□□□□ 0.68
SEMA3B-212ENST00000616701 USP44Q9H0E7 712 aa19.33■□□□□ 0.68
SEMA3B-212ENST00000616701 PRDM11Q9NQV5 511 aa19.33■□□□□ 0.68
SEMA3B-212ENST00000616701 USP35Q9P2H5 1018 aa19.33■□□□□ 0.68
SEMA3B-212ENST00000616701 KDM3BQ7LBC6 1761 aa19.33■□□□□ 0.68
SEMA3B-212ENST00000616701 GIGYF1O75420 1035 aaPredicted RBP19.32■□□□□ 0.68
SEMA3B-212ENST00000616701 PHKG2P15735 406 aa19.32■□□□□ 0.68
SEMA3B-212ENST00000616701 SOS1Q07889 1333 aaPredicted RBP19.32■□□□□ 0.68
SEMA3B-212ENST00000616701 HMMRO75330 724 aa19.32■□□□□ 0.68
SEMA3B-212ENST00000616701 GNAI3P08754 354 aa19.31■□□□□ 0.68
SEMA3B-212ENST00000616701 KLHL34Q8N239 644 aa19.31■□□□□ 0.68
SEMA3B-212ENST00000616701 SPRYD3Q8NCJ5 442 aa19.31■□□□□ 0.68
SEMA3B-212ENST00000616701 SPG7Q9UQ90 795 aa19.31■□□□□ 0.68
SEMA3B-212ENST00000616701 TBC1D9Q6ZT07 1266 aa19.3■□□□□ 0.68
SEMA3B-212ENST00000616701 CAMTA1Q9Y6Y1 1673 aa19.3■□□□□ 0.68
SEMA3B-212ENST00000616701 COL18A1P39060 1754 aa19.3■□□□□ 0.68
SEMA3B-212ENST00000616701 UBTFL1P0CB47 393 aaPredicted RBP19.3■□□□□ 0.68
SEMA3B-212ENST00000616701 AIMP1Q12904 312 aaKnown RBP19.3■□□□□ 0.68
SEMA3B-212ENST00000616701 TSHZ3Q63HK5 1081 aa19.3■□□□□ 0.68
SEMA3B-212ENST00000616701 SRCIN1Q9C0H9 1055 aa19.3■□□□□ 0.68
SEMA3B-212ENST00000616701 KDM6AO15550 1401 aaPredicted RBP19.3■□□□□ 0.68
SEMA3B-212ENST00000616701 CYP27B1O15528 508 aa19.29■□□□□ 0.68
SEMA3B-212ENST00000616701 DNAAF4Q8WXU2 420 aa19.29■□□□□ 0.68
SEMA3B-212ENST00000616701 SLKQ9H2G2 1235 aaPredicted RBP19.29■□□□□ 0.68
SEMA3B-212ENST00000616701 PIP4K2AP48426 406 aaPredicted RBP19.29■□□□□ 0.68
SEMA3B-212ENST00000616701 TOM1L2Q6ZVM7 507 aa19.29■□□□□ 0.68
SEMA3B-212ENST00000616701 HOXB7P09629 217 aa19.28■□□□□ 0.68
SEMA3B-212ENST00000616701 NBPF7P0C2Y1 421 aaPredicted RBP19.28■□□□□ 0.68
SEMA3B-212ENST00000616701 IFNL2Q8IZJ0 200 aa19.28■□□□□ 0.68
SEMA3B-212ENST00000616701 SLC52A2Q9HAB3 445 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms