RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 TCP11L2Q8N4U5 519 aa19.05■□□□□ 0.64
NOP56-220ENST00000616692 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.05■□□□□ 0.64
NOP56-220ENST00000616692 TULP2O00295 520 aa19.05■□□□□ 0.64
NOP56-220ENST00000616692 CAMTA1Q9Y6Y1 1673 aa19.04■□□□□ 0.64
NOP56-220ENST00000616692 PSDA5PKW4 1024 aaPredicted RBP19.04■□□□□ 0.64
NOP56-220ENST00000616692 EVA1CP58658 441 aa19.04■□□□□ 0.64
NOP56-220ENST00000616692 MPNDQ8N594 471 aa19.04■□□□□ 0.64
NOP56-220ENST00000616692 GPATCH11Q8N954 259 aa19.04■□□□□ 0.64
NOP56-220ENST00000616692 TIGD1Q96MW7 591 aa19.04■□□□□ 0.64
NOP56-220ENST00000616692 PDE3BQ13370 1112 aa19.03■□□□□ 0.64
NOP56-220ENST00000616692 SMG6Q86US8 1419 aaKnown RBP19.03■□□□□ 0.64
NOP56-220ENST00000616692 SLIT3O75094 1523 aa19.03■□□□□ 0.64
NOP56-220ENST00000616692 NUP188Q5SRE5 1749 aa19.03■□□□□ 0.64
NOP56-220ENST00000616692 CCDC66A2RUB6 948 aa19.03■□□□□ 0.64
NOP56-220ENST00000616692 MSNP26038 577 aaKnown RBP19.03■□□□□ 0.64
NOP56-220ENST00000616692 NBPF14Q5TI25 921 aa19.03■□□□□ 0.64
NOP56-220ENST00000616692 ANAPC15P60006 121 aa19.02■□□□□ 0.64
NOP56-220ENST00000616692 SATB1Q01826 763 aa19.02■□□□□ 0.64
NOP56-220ENST00000616692 BCL9O00512 1426 aa19.02■□□□□ 0.64
NOP56-220ENST00000616692 CAPN2P17655 700 aa19.02■□□□□ 0.63
NOP56-220ENST00000616692 EZH2Q15910 746 aaKnown RBP19.02■□□□□ 0.63
NOP56-220ENST00000616692 R3HDM1Q15032 1099 aaKnown RBP19.01■□□□□ 0.63
NOP56-220ENST00000616692 NBPF1Q3BBV0 1214 aa19.01■□□□□ 0.63
NOP56-220ENST00000616692 NBPF11Q86T75 865 aa19.01■□□□□ 0.63
NOP56-220ENST00000616692 AATKQ6ZMQ8 1374 aa19.01■□□□□ 0.63
NOP56-220ENST00000616692 EP400Q96L91 3159 aa19.01■□□□□ 0.63
NOP56-220ENST00000616692 ABTB2Q8N961 1025 aa19■□□□□ 0.63
NOP56-220ENST00000616692 TRIM37O94972 964 aa19■□□□□ 0.63
NOP56-220ENST00000616692 APBA3O96018 575 aa19■□□□□ 0.63
NOP56-220ENST00000616692 CHRNA2Q15822 529 aa19■□□□□ 0.63
NOP56-220ENST00000616692 STRN4Q9NRL3 753 aa19■□□□□ 0.63
NOP56-220ENST00000616692 COL5A2P05997 1499 aaPredicted RBP19■□□□□ 0.63
NOP56-220ENST00000616692 CRB1P82279 1406 aa18.99■□□□□ 0.63
NOP56-220ENST00000616692 PPIP5K1Q6PFW1 1433 aa18.99■□□□□ 0.63
NOP56-220ENST00000616692 CEP83Q9Y592 693 aa18.99■□□□□ 0.63
NOP56-220ENST00000616692 ABCC6O95255 1503 aa18.99■□□□□ 0.63
NOP56-220ENST00000616692 ZC3H6P61129 1189 aaKnown RBP18.99■□□□□ 0.63
NOP56-220ENST00000616692 ATP2B3Q16720 1220 aa18.99■□□□□ 0.63
NOP56-220ENST00000616692 CDCA8Q53HL2 280 aa18.99■□□□□ 0.63
NOP56-220ENST00000616692 MYCBPQ99417 103 aaPredicted RBP18.99■□□□□ 0.63
NOP56-220ENST00000616692 CDCA7Q9BWT1 371 aaPredicted RBP18.99■□□□□ 0.63
NOP56-220ENST00000616692 PEAK1Q9H792 1746 aa18.99■□□□□ 0.63
NOP56-220ENST00000616692 ZNF500O60304 480 aaPredicted RBP18.98■□□□□ 0.63
NOP56-220ENST00000616692 CT47A1Q5JQC4 288 aaPredicted RBP18.98■□□□□ 0.63
NOP56-220ENST00000616692 GOLIM4O00461 696 aa18.98■□□□□ 0.63
NOP56-220ENST00000616692 SASS6Q6UVJ0 657 aa18.98■□□□□ 0.63
NOP56-220ENST00000616692 KIF3AQ9Y496 699 aa18.98■□□□□ 0.63
NOP56-220ENST00000616692 GCP02774 474 aa18.97■□□□□ 0.63
NOP56-220ENST00000616692 ZNF526Q8TF50 670 aaPredicted RBP18.97■□□□□ 0.63
NOP56-220ENST00000616692 OVOS2A0A0G2JMS6 1433 aa18.96■□□□□ 0.63
NOP56-220ENST00000616692 OVOS2A0A0J9YW53 1432 aa18.96■□□□□ 0.63
NOP56-220ENST00000616692 USP6P35125 1406 aa18.96■□□□□ 0.63
NOP56-220ENST00000616692 OVOS2Q6IE36 1432 aa18.96■□□□□ 0.63
NOP56-220ENST00000616692 TTC36A6NLP5 189 aa18.96■□□□□ 0.63
NOP56-220ENST00000616692 LARP1Q6PKG0 1096 aaKnown RBP18.96■□□□□ 0.63
NOP56-220ENST00000616692 QRICH2Q9H0J4 1663 aa18.96■□□□□ 0.63
NOP56-220ENST00000616692 MAP2K1Q02750 393 aaPredicted RBP18.96■□□□□ 0.63
NOP56-220ENST00000616692 PLSCR1O15162 318 aa18.95■□□□□ 0.62
NOP56-220ENST00000616692 GZF1Q9H116 711 aaPredicted RBP18.95■□□□□ 0.62
NOP56-220ENST00000616692 NINLQ9Y2I6 1382 aa18.95■□□□□ 0.62
NOP56-220ENST00000616692 FAM182BQ5T319 152 aa18.95■□□□□ 0.62
NOP56-220ENST00000616692 BECN1Q14457 450 aa18.94■□□□□ 0.62
NOP56-220ENST00000616692 TRPM1Q7Z4N2 1603 aa18.94■□□□□ 0.62
NOP56-220ENST00000616692 BRPF1P55201 1214 aaPredicted RBP18.94■□□□□ 0.62
NOP56-220ENST00000616692 WNK3Q9BYP7 1800 aa18.93■□□□□ 0.62
NOP56-220ENST00000616692 COL18A1P39060 1754 aa18.93■□□□□ 0.62
NOP56-220ENST00000616692 CCDC173Q0VFZ6 552 aa18.93■□□□□ 0.62
NOP56-220ENST00000616692 RAI14Q9P0K7 980 aa18.93■□□□□ 0.62
NOP56-220ENST00000616692 SRPK2P78362 688 aaKnown RBP18.92■□□□□ 0.62
NOP56-220ENST00000616692 RNF217Q8TC41 542 aa18.92■□□□□ 0.62
NOP56-220ENST00000616692 NCAPGQ9BPX3 1015 aa18.92■□□□□ 0.62
NOP56-220ENST00000616692 ZNF692Q9BU19 519 aaPredicted RBP18.92■□□□□ 0.62
NOP56-220ENST00000616692 LRRC37A3O60309 1634 aa18.92■□□□□ 0.62
NOP56-220ENST00000616692 CSPP1Q1MSJ5 1256 aa18.92■□□□□ 0.62
NOP56-220ENST00000616692 CCDC172P0C7W6 258 aa18.91■□□□□ 0.62
NOP56-220ENST00000616692 NUTM2GQ5VZR2 741 aa18.91■□□□□ 0.62
NOP56-220ENST00000616692 NBPF9Q3BBW0 867 aa18.9■□□□□ 0.62
NOP56-220ENST00000616692 SPON1Q9HCB6 807 aa18.9■□□□□ 0.62
NOP56-220ENST00000616692 SMC4Q9NTJ3 1288 aa18.9■□□□□ 0.62
NOP56-220ENST00000616692 TTC21AQ8NDW8 1320 aa18.9■□□□□ 0.62
NOP56-220ENST00000616692 KCNH5Q8NCM2 988 aa18.9■□□□□ 0.62
NOP56-220ENST00000616692 PPP1R9BQ96SB3 815 aa18.9■□□□□ 0.62
NOP56-220ENST00000616692 EVC2Q86UK5 1308 aa18.9■□□□□ 0.62
NOP56-220ENST00000616692 KCNQ2O43526 872 aa18.89■□□□□ 0.61
NOP56-220ENST00000616692 SBF2Q86WG5 1849 aa18.89■□□□□ 0.61
NOP56-220ENST00000616692 MAFGO15525 162 aa18.88■□□□□ 0.61
NOP56-220ENST00000616692 CC2D2BQ6DHV5 1058 aa18.88■□□□□ 0.61
NOP56-220ENST00000616692 WDR17Q8IZU2 1322 aa18.88■□□□□ 0.61
NOP56-220ENST00000616692 PIK3C2AO00443 1686 aa18.88■□□□□ 0.61
NOP56-220ENST00000616692 USP54Q70EL1 1684 aa18.88■□□□□ 0.61
NOP56-220ENST00000616692 CPSF1Q10570 1443 aaKnown RBP18.88■□□□□ 0.61
NOP56-220ENST00000616692 CALCOCO1Q9P1Z2 691 aa18.87■□□□□ 0.61
NOP56-220ENST00000616692 NUDCQ9Y266 331 aa18.87■□□□□ 0.61
NOP56-220ENST00000616692 AKAP12Q02952 1782 aa18.87■□□□□ 0.61
NOP56-220ENST00000616692 DCAF8L1A6NGE4 600 aa18.87■□□□□ 0.61
NOP56-220ENST00000616692 GABPB1Q06547 395 aaPredicted RBP18.87■□□□□ 0.61
NOP56-220ENST00000616692 NLRP6P59044 892 aa18.87■□□□□ 0.61
NOP56-220ENST00000616692 ZNF710Q8N1W2 664 aa18.87■□□□□ 0.61
NOP56-220ENST00000616692 CASZ1Q86V15 1759 aa18.86■□□□□ 0.61
NOP56-220ENST00000616692 GTF2A1P52655 376 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms