RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
TARDBP-217ENST00000616545 RGS17Q9UGC6 210 aaPredicted RBP15.11■□□□□ 0.01
TARDBP-217ENST00000616545 TSPYL4Q9UJ04 414 aa15.11■□□□□ 0.01
TARDBP-217ENST00000616545 BTBD11A6QL63 1104 aa15.1■□□□□ 0.01
TARDBP-217ENST00000616545 ZNF428Q96B54 188 aa15.1■□□□□ 0.01
TARDBP-217ENST00000616545 MBIPQ9NS73 344 aa15.1■□□□□ 0.01
TARDBP-217ENST00000616545 LAS1LQ9Y4W2 734 aaKnown RBP15.1■□□□□ 0.01
TARDBP-217ENST00000616545 FANCIQ9NVI1 1328 aa15.1■□□□□ 0.01
TARDBP-217ENST00000616545 NFATC2IPQ8NCF5 419 aa15.09■□□□□ 0.01
TARDBP-217ENST00000616545 TMOD3Q9NYL9 352 aa15.09■□□□□ 0.01
TARDBP-217ENST00000616545 KRT27Q7Z3Y8 459 aa15.08■□□□□ 0
TARDBP-217ENST00000616545 HOXB7P09629 217 aa15.07■□□□□ 0
TARDBP-217ENST00000616545 FAM196AQ6ZSG2 479 aa15.07■□□□□ 0
TARDBP-217ENST00000616545 ZNF790Q6PG37 636 aa15.06■□□□□ 0
TARDBP-217ENST00000616545 POTEAQ6S8J7 498 aa15.06■□□□□ 0
TARDBP-217ENST00000616545 TTC5Q8N0Z6 440 aa15.06■□□□□ 0
TARDBP-217ENST00000616545 TSR2Q969E8 191 aaKnown RBP15.06■□□□□ 0
TARDBP-217ENST00000616545 SIPA1L3O60292 1781 aaPredicted RBP15.06■□□□□ 0
TARDBP-217ENST00000616545 VIRMAQ69YN4 1812 aaKnown RBP15.05■□□□□ -0
TARDBP-217ENST00000616545 PRIM1P49642 420 aaKnown RBP15.04■□□□□ -0
TARDBP-217ENST00000616545 EXOSC9Q06265 439 aaKnown RBP15.04■□□□□ -0
TARDBP-217ENST00000616545 PIGBQ92521 554 aa15.04■□□□□ -0
TARDBP-217ENST00000616545 SMARCC1Q92922 1105 aaPredicted RBP15.04■□□□□ -0
TARDBP-217ENST00000616545 EIF4A1P60842 406 aaKnown RBP15.03■□□□□ -0
TARDBP-217ENST00000616545 FMNL2Q96PY5 1086 aa15.03■□□□□ -0
TARDBP-217ENST00000616545 MIS18AQ9NYP9 233 aa15.03■□□□□ -0
TARDBP-217ENST00000616545 HEG1Q9ULI3 1381 aa15.02■□□□□ -0
TARDBP-217ENST00000616545 HMGB2P26583 209 aaKnown RBP15.02■□□□□ -0
TARDBP-217ENST00000616545 TWISTNBQ3B726 338 aaPredicted RBP15.02■□□□□ -0
TARDBP-217ENST00000616545 VSIG10Q8N0Z9 540 aa15.02■□□□□ -0
TARDBP-217ENST00000616545 RCAN3Q9UKA8 241 aa15.02■□□□□ -0
TARDBP-217ENST00000616545 KDM3BQ7LBC6 1761 aa15.02□□□□□ -0.01
TARDBP-217ENST00000616545 RGS12O14924 1447 aa15.01□□□□□ -0.01
TARDBP-217ENST00000616545 TOGARAM1Q9Y4F4 1720 aa15.01□□□□□ -0.01
TARDBP-217ENST00000616545 VAMP4O75379 141 aa15.01□□□□□ -0.01
TARDBP-217ENST00000616545 ALDH1L2Q3SY69 923 aa15.01□□□□□ -0.01
TARDBP-217ENST00000616545 SYTL4Q96C24 671 aaPredicted RBP15.01□□□□□ -0.01
TARDBP-217ENST00000616545 SNRPA1P09661 255 aaKnown RBP15□□□□□ -0.01
TARDBP-217ENST00000616545 TEX13AQ9BXU3 409 aaPredicted RBP15□□□□□ -0.01
TARDBP-217ENST00000616545 BCL11BQ9C0K0 894 aaPredicted RBP15□□□□□ -0.01
TARDBP-217ENST00000616545 DOT1LQ8TEK3 1739 aa15□□□□□ -0.01
TARDBP-217ENST00000616545 ITGB4P16144 1822 aa14.99□□□□□ -0.01
TARDBP-217ENST00000616545 GIGYF1O75420 1035 aaPredicted RBP14.99□□□□□ -0.01
TARDBP-217ENST00000616545 BRPF1P55201 1214 aaPredicted RBP14.99□□□□□ -0.01
TARDBP-217ENST00000616545 C8orf58Q8NAV2 365 aa14.99□□□□□ -0.01
TARDBP-217ENST00000616545 ACSBG1Q96GR2 724 aa14.99□□□□□ -0.01
TARDBP-217ENST00000616545 ATG3Q9NT62 314 aa14.99□□□□□ -0.01
TARDBP-217ENST00000616545 PAPPAQ13219 1627 aa14.99□□□□□ -0.01
TARDBP-217ENST00000616545 NHSQ6T4R5 1651 aa14.98□□□□□ -0.01
TARDBP-217ENST00000616545 SLC39A6Q13433 755 aa14.98□□□□□ -0.01
TARDBP-217ENST00000616545 CCDC30Q5VVM6 783 aa14.98□□□□□ -0.01
TARDBP-217ENST00000616545 ZNF496Q96IT1 587 aaPredicted RBP14.98□□□□□ -0.01
TARDBP-217ENST00000616545 BRWD3Q6RI45 1802 aa14.97□□□□□ -0.01
TARDBP-217ENST00000616545 KCNQ3O43525 872 aa14.97□□□□□ -0.01
TARDBP-217ENST00000616545 RARSP54136 660 aaKnown RBP14.97□□□□□ -0.01
TARDBP-217ENST00000616545 TSPYL6Q8N831 410 aa14.97□□□□□ -0.01
TARDBP-217ENST00000616545 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.97□□□□□ -0.01
TARDBP-217ENST00000616545 ASAP1Q9ULH1 1129 aa14.97□□□□□ -0.01
TARDBP-217ENST00000616545 ERBB4Q15303 1308 aa14.96□□□□□ -0.01
TARDBP-217ENST00000616545 STK31Q9BXU1 1019 aa14.96□□□□□ -0.01
TARDBP-217ENST00000616545 UBR2Q8IWV8 1755 aa14.96□□□□□ -0.02
TARDBP-217ENST00000616545 ELL2O00472 640 aaPredicted RBP14.95□□□□□ -0.02
TARDBP-217ENST00000616545 KCNQ2O43526 872 aa14.95□□□□□ -0.02
TARDBP-217ENST00000616545 KCPQ6ZWJ8 1503 aa14.95□□□□□ -0.02
TARDBP-217ENST00000616545 KIF16BQ96L93 1317 aa14.94□□□□□ -0.02
TARDBP-217ENST00000616545 KAT6BQ8WYB5 2073 aa14.94□□□□□ -0.02
TARDBP-217ENST00000616545 HDGFL1Q5TGJ6 251 aa14.94□□□□□ -0.02
TARDBP-217ENST00000616545 PALLDQ8WX93 1383 aa14.94□□□□□ -0.02
TARDBP-217ENST00000616545 IPO8O15397 1037 aaKnown RBP14.93□□□□□ -0.02
TARDBP-217ENST00000616545 PTCD1O75127 700 aaKnown RBP14.93□□□□□ -0.02
TARDBP-217ENST00000616545 STARD3NLO95772 234 aa14.93□□□□□ -0.02
TARDBP-217ENST00000616545 KRT24Q2M2I5 525 aa14.93□□□□□ -0.02
TARDBP-217ENST00000616545 FAM182BQ5T319 152 aa14.93□□□□□ -0.02
TARDBP-217ENST00000616545 SMC4Q9NTJ3 1288 aa14.93□□□□□ -0.02
TARDBP-217ENST00000616545 DBF4Q9UBU7 674 aaPredicted RBP14.93□□□□□ -0.02
TARDBP-217ENST00000616545 SBF2Q86WG5 1849 aa14.93□□□□□ -0.02
TARDBP-217ENST00000616545 ZNF831Q5JPB2 1677 aa14.93□□□□□ -0.02
TARDBP-217ENST00000616545 RNF123Q5XPI4 1314 aa14.92□□□□□ -0.02
TARDBP-217ENST00000616545 LOC102724428A0A0B4J2F2 783 aa14.92□□□□□ -0.02
TARDBP-217ENST00000616545 MS4A1P11836 297 aa14.92□□□□□ -0.02
TARDBP-217ENST00000616545 SIK1P57059 783 aa14.92□□□□□ -0.02
TARDBP-217ENST00000616545 SSH1Q8WYL5 1049 aa14.92□□□□□ -0.02
TARDBP-217ENST00000616545 ARHGAP45Q92619 1136 aa14.92□□□□□ -0.02
TARDBP-217ENST00000616545 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
TARDBP-217ENST00000616545 PLSCR1O15162 318 aa14.91□□□□□ -0.02
TARDBP-217ENST00000616545 TRIM37O94972 964 aa14.91□□□□□ -0.02
TARDBP-217ENST00000616545 HYPKQ9NX55 129 aa14.91□□□□□ -0.02
TARDBP-217ENST00000616545 CICQ96RK0 1608 aaPredicted RBP14.91□□□□□ -0.02
TARDBP-217ENST00000616545 SLC4A2P04920 1241 aa14.9□□□□□ -0.02
TARDBP-217ENST00000616545 EIF2S2P20042 333 aaKnown RBP14.9□□□□□ -0.02
TARDBP-217ENST00000616545 SLC27A3Q5K4L6 730 aa14.9□□□□□ -0.02
TARDBP-217ENST00000616545 MRPL50Q8N5N7 158 aaKnown RBP14.9□□□□□ -0.02
TARDBP-217ENST00000616545 DDX21Q9NR30 783 aaKnown RBP eCLIP14.9□□□□□ -0.02
TARDBP-217ENST00000616545 SUPT16HQ9Y5B9 1047 aaKnown RBP14.9□□□□□ -0.02
TARDBP-217ENST00000616545 USP16Q9Y5T5 823 aa14.9□□□□□ -0.02
TARDBP-217ENST00000616545 PTPRCP08575 1304 aa14.9□□□□□ -0.02
TARDBP-217ENST00000616545 BTAF1O14981 1849 aa14.89□□□□□ -0.03
TARDBP-217ENST00000616545 CACNA1FO60840 1977 aa14.89□□□□□ -0.03
TARDBP-217ENST00000616545 BCAR3O75815 825 aa14.89□□□□□ -0.03
TARDBP-217ENST00000616545 ATP6V1AP38606 617 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms