RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 MEIS3Q99687 375 aa17.28■□□□□ 0.36
EPHB4-210ENST00000616502 NLRP1Q9C000 1473 aa17.27■□□□□ 0.36
EPHB4-210ENST00000616502 IL16Q14005 1332 aa17.27■□□□□ 0.36
EPHB4-210ENST00000616502 GOLGA6L6A8MZA4 724 aa17.27■□□□□ 0.36
EPHB4-210ENST00000616502 HCLS1P14317 486 aaPredicted RBP17.27■□□□□ 0.36
EPHB4-210ENST00000616502 GPT2Q8TD30 523 aa17.27■□□□□ 0.36
EPHB4-210ENST00000616502 KDM5AP29375 1690 aaKnown RBP17.27■□□□□ 0.36
EPHB4-210ENST00000616502 IGSF3O75054 1194 aa17.27■□□□□ 0.35
EPHB4-210ENST00000616502 KIF2CQ99661 725 aa17.27■□□□□ 0.35
EPHB4-210ENST00000616502 DDX54Q8TDD1 881 aaKnown RBP17.26■□□□□ 0.35
EPHB4-210ENST00000616502 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
EPHB4-210ENST00000616502 HMGN5P82970 282 aaKnown RBP17.26■□□□□ 0.35
EPHB4-210ENST00000616502 RPAP2Q8IXW5 612 aaPredicted RBP17.26■□□□□ 0.35
EPHB4-210ENST00000616502 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
EPHB4-210ENST00000616502 FGD1P98174 961 aa17.25■□□□□ 0.35
EPHB4-210ENST00000616502 PLEKHF1Q96S99 279 aa17.25■□□□□ 0.35
EPHB4-210ENST00000616502 KIF3AQ9Y496 699 aa17.25■□□□□ 0.35
EPHB4-210ENST00000616502 SYNMO15061 1565 aa17.25■□□□□ 0.35
EPHB4-210ENST00000616502 ADCY5O95622 1261 aa17.25■□□□□ 0.35
EPHB4-210ENST00000616502 NSFL1CQ9UNZ2 370 aaKnown RBP17.25■□□□□ 0.35
EPHB4-210ENST00000616502 CDK11BP21127 795 aaKnown RBP17.24■□□□□ 0.35
EPHB4-210ENST00000616502 SLC39A6Q13433 755 aa17.24■□□□□ 0.35
EPHB4-210ENST00000616502 SIRT2Q8IXJ6 389 aa17.24■□□□□ 0.35
EPHB4-210ENST00000616502 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
EPHB4-210ENST00000616502 MCM2P49736 904 aa17.23■□□□□ 0.35
EPHB4-210ENST00000616502 PPP4R3BQ5MIZ7 849 aa17.23■□□□□ 0.35
EPHB4-210ENST00000616502 DCTPP1Q9H773 170 aa17.23■□□□□ 0.35
EPHB4-210ENST00000616502 INO80Q9ULG1 1556 aaPredicted RBP17.23■□□□□ 0.35
EPHB4-210ENST00000616502 TMEM2Q9UHN6 1383 aa17.23■□□□□ 0.35
EPHB4-210ENST00000616502 WDR33Q9C0J8 1336 aaKnown RBP17.23■□□□□ 0.35
EPHB4-210ENST00000616502 HS1BP3Q53T59 392 aa17.23■□□□□ 0.35
EPHB4-210ENST00000616502 SIL1Q9H173 461 aa17.23■□□□□ 0.35
EPHB4-210ENST00000616502 C9orf78Q9NZ63 289 aaPredicted RBP17.22■□□□□ 0.35
EPHB4-210ENST00000616502 ATP6V1DQ9Y5K8 247 aa17.22■□□□□ 0.35
EPHB4-210ENST00000616502 USP48Q86UV5 1035 aa17.22■□□□□ 0.35
EPHB4-210ENST00000616502 NOLC1Q14978 699 aaKnown RBP eCLIP17.21■□□□□ 0.351e-5■□□□□ 10.6
EPHB4-210ENST00000616502 RAPGEF4Q8WZA2 1011 aa17.21■□□□□ 0.35
EPHB4-210ENST00000616502 LRRCC1Q9C099 1032 aa17.21■□□□□ 0.35
EPHB4-210ENST00000616502 DIAPH3Q9NSV4 1193 aa17.21■□□□□ 0.35
EPHB4-210ENST00000616502 MCM5P33992 734 aa17.21■□□□□ 0.35
EPHB4-210ENST00000616502 NUTM1Q86Y26 1132 aa17.21■□□□□ 0.35
EPHB4-210ENST00000616502 ARHGAP45Q92619 1136 aa17.21■□□□□ 0.35
EPHB4-210ENST00000616502 FBXW7Q969H0 707 aa17.21■□□□□ 0.35
EPHB4-210ENST00000616502 CCDC85AQ96PX6 553 aaPredicted RBP17.21■□□□□ 0.35
EPHB4-210ENST00000616502 MYOM2P54296 1465 aa17.21■□□□□ 0.35
EPHB4-210ENST00000616502 SURF6O75683 361 aaKnown RBP17.21■□□□□ 0.35
EPHB4-210ENST00000616502 GIMAP6Q6P9H5 292 aa17.21■□□□□ 0.35
EPHB4-210ENST00000616502 PDCL2Q8N4E4 241 aa17.21■□□□□ 0.35
EPHB4-210ENST00000616502 LGR6Q9HBX8 967 aa17.21■□□□□ 0.35
EPHB4-210ENST00000616502 GADD45BO75293 160 aaPredicted RBP17.2■□□□□ 0.34
EPHB4-210ENST00000616502 GNAI2P04899 355 aa17.2■□□□□ 0.34
EPHB4-210ENST00000616502 ZRSR1Q15695 479 aaKnown RBP17.2■□□□□ 0.34
EPHB4-210ENST00000616502 GNAT3A8MTJ3 354 aa17.2■□□□□ 0.34
EPHB4-210ENST00000616502 NPHP1O15259 732 aa17.2■□□□□ 0.34
EPHB4-210ENST00000616502 PTCD1O75127 700 aaKnown RBP17.2■□□□□ 0.34
EPHB4-210ENST00000616502 FERMT3Q86UX7 667 aa17.2■□□□□ 0.34
EPHB4-210ENST00000616502 ANKRD44Q8N8A2 993 aa17.2■□□□□ 0.34
EPHB4-210ENST00000616502 CAMK4Q16566 473 aa17.2■□□□□ 0.34
EPHB4-210ENST00000616502 EVA1CP58658 441 aa17.19■□□□□ 0.34
EPHB4-210ENST00000616502 CNPY2Q9Y2B0 182 aa17.19■□□□□ 0.34
EPHB4-210ENST00000616502 MROH2AA6NES4 1674 aa17.19■□□□□ 0.34
EPHB4-210ENST00000616502 KCNQ3O43525 872 aa17.19■□□□□ 0.34
EPHB4-210ENST00000616502 TRIM5Q9C035 493 aa17.19■□□□□ 0.34
EPHB4-210ENST00000616502 PHAXQ9H814 394 aaKnown RBP17.19■□□□□ 0.34
EPHB4-210ENST00000616502 ZNF500O60304 480 aaPredicted RBP17.18■□□□□ 0.34
EPHB4-210ENST00000616502 PDE1AP54750 535 aa17.18■□□□□ 0.34
EPHB4-210ENST00000616502 MX1P20591 662 aa17.18■□□□□ 0.34
EPHB4-210ENST00000616502 CEP85Q6P2H3 762 aa17.18■□□□□ 0.34
EPHB4-210ENST00000616502 PPP6R1Q9UPN7 881 aa17.18■□□□□ 0.34
EPHB4-210ENST00000616502 BTBD11A6QL63 1104 aa17.18■□□□□ 0.34
EPHB4-210ENST00000616502 FOSBP53539 338 aa17.18■□□□□ 0.34
EPHB4-210ENST00000616502 NSD2O96028 1365 aa17.17■□□□□ 0.34
EPHB4-210ENST00000616502 FRMPD1Q5SYB0 1578 aa17.17■□□□□ 0.34
EPHB4-210ENST00000616502 KRT28Q7Z3Y7 464 aa17.17■□□□□ 0.34
EPHB4-210ENST00000616502 DIP2CQ9Y2E4 1556 aa17.17■□□□□ 0.34
EPHB4-210ENST00000616502 DDIT3P35638 169 aa17.17■□□□□ 0.34
EPHB4-210ENST00000616502 CWC27Q6UX04 472 aaKnown RBP17.17■□□□□ 0.34
EPHB4-210ENST00000616502 SBNO2Q9Y2G9 1366 aa17.17■□□□□ 0.34
EPHB4-210ENST00000616502 BICD2Q8TD16 824 aa17.17■□□□□ 0.34
EPHB4-210ENST00000616502 GLI2P10070 1586 aa17.16■□□□□ 0.34
EPHB4-210ENST00000616502 UBTFL1P0CB47 393 aaPredicted RBP17.16■□□□□ 0.34
EPHB4-210ENST00000616502 CCDC183Q5T5S1 534 aa17.16■□□□□ 0.34
EPHB4-210ENST00000616502 TULP4Q9NRJ4 1543 aa17.16■□□□□ 0.34
EPHB4-210ENST00000616502 FAM184AQ8NB25 1140 aa17.16■□□□□ 0.34
EPHB4-210ENST00000616502 A2ML1A8K2U0 1454 aa17.16■□□□□ 0.34
EPHB4-210ENST00000616502 CCDC83Q8IWF9 413 aa17.16■□□□□ 0.34
EPHB4-210ENST00000616502 TAF7Q15545 349 aaPredicted RBP17.15■□□□□ 0.34
EPHB4-210ENST00000616502 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.15■□□□□ 0.34
EPHB4-210ENST00000616502 RIMBP3CA6NJZ7 1639 aa17.15■□□□□ 0.34
EPHB4-210ENST00000616502 RIMBP3BA6NNM3 1639 aa17.15■□□□□ 0.34
EPHB4-210ENST00000616502 RIMBP3Q9UFD9 1639 aa17.15■□□□□ 0.34
EPHB4-210ENST00000616502 NBPF6Q5VWK0 638 aa17.15■□□□□ 0.34
EPHB4-210ENST00000616502 NBPF4Q96M43 638 aa17.15■□□□□ 0.34
EPHB4-210ENST00000616502 LRRFIP2Q9Y608 721 aaKnown RBP17.14■□□□□ 0.34
EPHB4-210ENST00000616502 C16orf45Q96MC5 204 aaPredicted RBP17.14■□□□□ 0.33
EPHB4-210ENST00000616502 CCDC94Q9BW85 323 aaPredicted RBP17.14■□□□□ 0.33
EPHB4-210ENST00000616502 ADGRB3O60242 1522 aa17.14■□□□□ 0.33
EPHB4-210ENST00000616502 ARAP3Q8WWN8 1544 aa17.14■□□□□ 0.33
EPHB4-210ENST00000616502 CCDC30Q5VVM6 783 aa17.14■□□□□ 0.33
EPHB4-210ENST00000616502 HOXC9P31274 260 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms