RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 AFF2P51816 1311 aa14.36□□□□□ -0.11
MMP28-206ENST00000616383 SPATA31A1Q5TZJ5 1347 aa14.36□□□□□ -0.11
MMP28-206ENST00000616383 SPATA31A5Q5VU36 1347 aa14.36□□□□□ -0.11
MMP28-206ENST00000616383 SPATA31A7Q8IWB4 1347 aa14.36□□□□□ -0.11
MMP28-206ENST00000616383 ATMINO43313 823 aaPredicted RBP14.35□□□□□ -0.11
MMP28-206ENST00000616383 GOLGA2Q08379 1002 aa14.35□□□□□ -0.11
MMP28-206ENST00000616383 ASTLQ6HA08 431 aaPredicted RBP14.35□□□□□ -0.11
MMP28-206ENST00000616383 USP21Q9UK80 565 aa14.35□□□□□ -0.11
MMP28-206ENST00000616383 CCDC9Q9Y3X0 531 aaKnown RBP14.35□□□□□ -0.11
MMP28-206ENST00000616383 THSD7AQ9UPZ6 1657 aa14.34□□□□□ -0.11
MMP28-206ENST00000616383 C7P10643 843 aa14.34□□□□□ -0.11
MMP28-206ENST00000616383 VPS72Q15906 364 aa14.34□□□□□ -0.11
MMP28-206ENST00000616383 WDR63Q8IWG1 891 aa14.34□□□□□ -0.11
MMP28-206ENST00000616383 CDCA7LQ96GN5 454 aa14.34□□□□□ -0.11
MMP28-206ENST00000616383 THUMPD2Q9BTF0 503 aaKnown RBP14.34□□□□□ -0.11
MMP28-206ENST00000616383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.11
MMP28-206ENST00000616383 SPG7Q9UQ90 795 aa14.34□□□□□ -0.11
MMP28-206ENST00000616383 ATRNO75882 1429 aa14.33□□□□□ -0.11
MMP28-206ENST00000616383 TOGARAM1Q9Y4F4 1720 aa14.33□□□□□ -0.12
MMP28-206ENST00000616383 GNAT3A8MTJ3 354 aa14.33□□□□□ -0.12
MMP28-206ENST00000616383 DCTN1Q14203 1278 aa14.33□□□□□ -0.12
MMP28-206ENST00000616383 TNS2Q63HR2 1409 aa14.32□□□□□ -0.12
MMP28-206ENST00000616383 KDM3BQ7LBC6 1761 aa14.32□□□□□ -0.12
MMP28-206ENST00000616383 HTATSF1O43719 755 aaKnown RBP14.32□□□□□ -0.12
MMP28-206ENST00000616383 C1orf141Q5JVX7 400 aa14.32□□□□□ -0.12
MMP28-206ENST00000616383 MCM10Q7L590 875 aa14.32□□□□□ -0.12
MMP28-206ENST00000616383 RTF1Q92541 710 aaKnown RBP14.32□□□□□ -0.12
MMP28-206ENST00000616383 UPF1Q92900 1129 aaKnown RBP eCLIP14.32□□□□□ -0.12
MMP28-206ENST00000616383 THRAP3Q9Y2W1 955 aaKnown RBP14.32□□□□□ -0.12
MMP28-206ENST00000616383 IL16Q14005 1332 aa14.32□□□□□ -0.12
MMP28-206ENST00000616383 E9PSI1 815 aa14.31□□□□□ -0.12
MMP28-206ENST00000616383 SLFN5Q08AF3 891 aa14.31□□□□□ -0.12
MMP28-206ENST00000616383 AKAP4Q5JQC9 854 aa14.31□□□□□ -0.12
MMP28-206ENST00000616383 ZCRB1Q8TBF4 217 aaKnown RBP14.31□□□□□ -0.12
MMP28-206ENST00000616383 PCDH11XQ9BZA7 1347 aa14.31□□□□□ -0.12
MMP28-206ENST00000616383 PCDH11YQ9BZA8 1340 aa14.31□□□□□ -0.12
MMP28-206ENST00000616383 KDM6AO15550 1401 aaPredicted RBP14.31□□□□□ -0.12
MMP28-206ENST00000616383 DOT1LQ8TEK3 1739 aa14.3□□□□□ -0.12
MMP28-206ENST00000616383 ITGB4P16144 1822 aa14.3□□□□□ -0.12
MMP28-206ENST00000616383 CYP27B1O15528 508 aa14.3□□□□□ -0.12
MMP28-206ENST00000616383 PHKG2P15735 406 aa14.3□□□□□ -0.12
MMP28-206ENST00000616383 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
MMP28-206ENST00000616383 POTEMA6NI47 508 aa14.29□□□□□ -0.12
MMP28-206ENST00000616383 BARGINQ6ZT62 677 aa14.29□□□□□ -0.12
MMP28-206ENST00000616383 IFNL2Q8IZJ0 200 aa14.29□□□□□ -0.12
MMP28-206ENST00000616383 PROM2Q8N271 834 aa14.29□□□□□ -0.12
MMP28-206ENST00000616383 CDCA7Q9BWT1 371 aaPredicted RBP14.29□□□□□ -0.12
MMP28-206ENST00000616383 CEMIPQ8WUJ3 1361 aa14.29□□□□□ -0.12
MMP28-206ENST00000616383 MRC1P22897 1456 aa14.29□□□□□ -0.12
MMP28-206ENST00000616383 DUSP27Q5VZP5 1158 aa14.28□□□□□ -0.12
MMP28-206ENST00000616383 MPRIPQ6WCQ1 1025 aa14.28□□□□□ -0.12
MMP28-206ENST00000616383 TRMT2AQ8IZ69 625 aaKnown RBP14.28□□□□□ -0.12
MMP28-206ENST00000616383 IL17REQ8NFR9 667 aa14.28□□□□□ -0.12
MMP28-206ENST00000616383 MYH16Q9H6N6 1097 aa14.28□□□□□ -0.12
MMP28-206ENST00000616383 FANCIQ9NVI1 1328 aa14.27□□□□□ -0.12
MMP28-206ENST00000616383 GNAI1P63096 354 aa14.27□□□□□ -0.13
MMP28-206ENST00000616383 FAM98CQ17RN3 349 aaKnown RBP14.27□□□□□ -0.13
MMP28-206ENST00000616383 MAMSTRQ6ZN01 415 aa14.27□□□□□ -0.13
MMP28-206ENST00000616383 IFT57Q9NWB7 429 aa14.27□□□□□ -0.13
MMP28-206ENST00000616383 TRPC5Q9UL62 973 aaPredicted RBP14.27□□□□□ -0.13
MMP28-206ENST00000616383 BRWD3Q6RI45 1802 aa14.27□□□□□ -0.13
MMP28-206ENST00000616383 PAPPAQ13219 1627 aa14.26□□□□□ -0.13
MMP28-206ENST00000616383 RNMTO43148 476 aaKnown RBP14.26□□□□□ -0.13
MMP28-206ENST00000616383 TSR2Q969E8 191 aaKnown RBP14.26□□□□□ -0.13
MMP28-206ENST00000616383 LGR6Q9HBX8 967 aa14.26□□□□□ -0.13
MMP28-206ENST00000616383 LAS1LQ9Y4W2 734 aaKnown RBP14.26□□□□□ -0.13
MMP28-206ENST00000616383 KAT6BQ8WYB5 2073 aa14.26□□□□□ -0.13
MMP28-206ENST00000616383 HSP90AB1P08238 724 aaKnown RBP14.25□□□□□ -0.13
MMP28-206ENST00000616383 ZNF853P0CG23 659 aa14.25□□□□□ -0.13
MMP28-206ENST00000616383 DDB1Q16531 1140 aa14.25□□□□□ -0.13
MMP28-206ENST00000616383 DDX54Q8TDD1 881 aaKnown RBP14.25□□□□□ -0.13
MMP28-206ENST00000616383 GJD4Q96KN9 370 aaPredicted RBP14.25□□□□□ -0.13
MMP28-206ENST00000616383 CFAP44Q96MT7 982 aa14.25□□□□□ -0.13
MMP28-206ENST00000616383 EXOC5O00471 708 aa14.24□□□□□ -0.13
MMP28-206ENST00000616383 ATN1P54259 1190 aaPredicted RBP14.24□□□□□ -0.13
MMP28-206ENST00000616383 TEFQ10587 303 aa14.24□□□□□ -0.13
MMP28-206ENST00000616383 POTEGQ6S5H5 508 aa14.24□□□□□ -0.13
MMP28-206ENST00000616383 KIF12Q96FN5 646 aa14.24□□□□□ -0.13
MMP28-206ENST00000616383 DCAF5Q96JK2 942 aa14.24□□□□□ -0.13
MMP28-206ENST00000616383 MBIPQ9NS73 344 aa14.24□□□□□ -0.13
MMP28-206ENST00000616383 UBR2Q8IWV8 1755 aa14.24□□□□□ -0.13
MMP28-206ENST00000616383 A0A0G2JS52 829 aa14.23□□□□□ -0.13
MMP28-206ENST00000616383 MYT1Q01538 1121 aa14.23□□□□□ -0.13
MMP28-206ENST00000616383 NKX1-1Q15270 411 aaPredicted RBP14.23□□□□□ -0.13
MMP28-206ENST00000616383 ZNF772Q68DY9 489 aaPredicted RBP14.23□□□□□ -0.13
MMP28-206ENST00000616383 QTRT2Q9H974 415 aaKnown RBP14.23□□□□□ -0.13
MMP28-206ENST00000616383 CHL1O00533 1208 aa14.22□□□□□ -0.13
MMP28-206ENST00000616383 TAF7Q15545 349 aaPredicted RBP14.22□□□□□ -0.13
MMP28-206ENST00000616383 SBF2Q86WG5 1849 aa14.22□□□□□ -0.13
MMP28-206ENST00000616383 C5P01031 1676 aa14.21□□□□□ -0.13
MMP28-206ENST00000616383 EXOSC9Q06265 439 aaKnown RBP14.21□□□□□ -0.13
MMP28-206ENST00000616383 SCUBE2Q9NQ36 999 aa14.21□□□□□ -0.13
MMP28-206ENST00000616383 MIS18AQ9NYP9 233 aa14.21□□□□□ -0.13
MMP28-206ENST00000616383 TSPYL4Q9UJ04 414 aa14.21□□□□□ -0.13
MMP28-206ENST00000616383 PLCD3Q8N3E9 789 aa14.2□□□□□ -0.14
MMP28-206ENST00000616383 SLC52A2Q9HAB3 445 aa14.2□□□□□ -0.14
MMP28-206ENST00000616383 NHSQ6T4R5 1651 aa14.2□□□□□ -0.14
MMP28-206ENST00000616383 LAMB4A4D0S4 1761 aa14.19□□□□□ -0.14
MMP28-206ENST00000616383 MARCH10Q8NA82 808 aaPredicted RBP14.19□□□□□ -0.14
MMP28-206ENST00000616383 BABAM1Q9NWV8 329 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms