RNA–Protein interactions for RNA: ENST00000616003.4

MID1-212, Transcript of midline 1, humanhuman

TSL 1 (best) BASIC

Gene MID1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MID1-212ENST00000616003 SETD1AO15047 1707 aaKnown RBP9.55□□□□□ -0.88
MID1-212ENST00000616003 MON2Q7Z3U7 1717 aa9.55□□□□□ -0.88
MID1-212ENST00000616003 ST18O60284 1047 aa9.55□□□□□ -0.88
MID1-212ENST00000616003 SAFB2Q14151 953 aaKnown RBP eCLIP9.55□□□□□ -0.88
MID1-212ENST00000616003 PPP4R3BQ5MIZ7 849 aa9.55□□□□□ -0.88
MID1-212ENST00000616003 TAF3Q5VWG9 929 aa9.55□□□□□ -0.88
MID1-212ENST00000616003 CASC1Q6TDU7 716 aa9.55□□□□□ -0.88
MID1-212ENST00000616003 USP26Q9BXU7 913 aa9.55□□□□□ -0.88
MID1-212ENST00000616003 NEO1Q92859 1461 aa9.55□□□□□ -0.88
MID1-212ENST00000616003 EDC4Q6P2E9 1401 aaKnown RBP9.55□□□□□ -0.88
MID1-212ENST00000616003 TWISTNBQ3B726 338 aaPredicted RBP9.54□□□□□ -0.88
MID1-212ENST00000616003 GGT6Q6P531 493 aa9.54□□□□□ -0.88
MID1-212ENST00000616003 DCTPP1Q9H773 170 aa9.54□□□□□ -0.88
MID1-212ENST00000616003 MBIPQ9NS73 344 aa9.54□□□□□ -0.88
MID1-212ENST00000616003 RICTORQ6R327 1708 aa9.54□□□□□ -0.88
MID1-212ENST00000616003 MINK1Q8N4C8 1332 aaPredicted RBP9.54□□□□□ -0.88
MID1-212ENST00000616003 AATKQ6ZMQ8 1374 aa9.54□□□□□ -0.88
MID1-212ENST00000616003 REC8O95072 547 aa9.54□□□□□ -0.88
MID1-212ENST00000616003 CSPP1Q1MSJ5 1256 aa9.54□□□□□ -0.88
MID1-212ENST00000616003 DNTTIP2Q5QJE6 756 aaKnown RBP9.54□□□□□ -0.88
MID1-212ENST00000616003 TSPYL6Q8N831 410 aa9.54□□□□□ -0.88
MID1-212ENST00000616003 PRAM1Q96QH2 718 aa9.54□□□□□ -0.88
MID1-212ENST00000616003 MBD3O95983 291 aa9.53□□□□□ -0.88
MID1-212ENST00000616003 HSP90AB3PQ58FF7 597 aa9.53□□□□□ -0.88
MID1-212ENST00000616003 ANKRD44Q8N8A2 993 aa9.53□□□□□ -0.88
MID1-212ENST00000616003 SGSM3Q96HU1 749 aa9.53□□□□□ -0.88
MID1-212ENST00000616003 RBSNQ9H1K0 784 aa9.53□□□□□ -0.88
MID1-212ENST00000616003 POLKQ9UBT6 870 aa9.53□□□□□ -0.88
MID1-212ENST00000616003 ZKSCAN5Q9Y2L8 839 aa9.53□□□□□ -0.88
MID1-212ENST00000616003 MSH6P52701 1360 aa9.53□□□□□ -0.88
MID1-212ENST00000616003 LOC102724159A0A0B4J2E5 919 aa9.52□□□□□ -0.88
MID1-212ENST00000616003 SEMA3FQ13275 785 aa9.52□□□□□ -0.88
MID1-212ENST00000616003 PWP2Q15269 919 aaKnown RBP9.52□□□□□ -0.88
MID1-212ENST00000616003 LRSAM1Q6UWE0 723 aa9.52□□□□□ -0.88
MID1-212ENST00000616003 MTERF4Q7Z6M4 381 aaKnown RBP9.52□□□□□ -0.88
MID1-212ENST00000616003 GPT2Q8TD30 523 aa9.52□□□□□ -0.88
MID1-212ENST00000616003 C3P01024 1663 aa9.52□□□□□ -0.89
MID1-212ENST00000616003 PRIM1P49642 420 aaKnown RBP9.52□□□□□ -0.89
MID1-212ENST00000616003 PKP1Q13835 747 aa9.52□□□□□ -0.89
MID1-212ENST00000616003 NUTM2DQ5VT03 806 aaPredicted RBP9.52□□□□□ -0.89
MID1-212ENST00000616003 THUMPD2Q9BTF0 503 aaKnown RBP9.52□□□□□ -0.89
MID1-212ENST00000616003 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.52□□□□□ -0.89
MID1-212ENST00000616003 CCDC39Q9UFE4 941 aa9.52□□□□□ -0.89
MID1-212ENST00000616003 RTL1A6NKG5 1358 aa9.51□□□□□ -0.89
MID1-212ENST00000616003 ITSN1Q15811 1721 aa9.51□□□□□ -0.89
MID1-212ENST00000616003 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.51□□□□□ -0.89
MID1-212ENST00000616003 PHACTR3Q96KR7 559 aa9.51□□□□□ -0.89
MID1-212ENST00000616003 STK26Q9P289 416 aa9.51□□□□□ -0.89
MID1-212ENST00000616003 AKAP12Q02952 1782 aa9.51□□□□□ -0.89
MID1-212ENST00000616003 N4BP2Q86UW6 1770 aaPredicted RBP9.51□□□□□ -0.89
MID1-212ENST00000616003 DYNC1I1O14576 645 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 SDSP20132 328 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 IL13P35225 146 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 NBPF9Q3BBW0 867 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 RINLQ6ZS11 566 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 RPAP2Q8IXW5 612 aaPredicted RBP9.5□□□□□ -0.89
MID1-212ENST00000616003 SSH2Q76I76 1423 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 UQCRHLA0A096LP55 91 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 UQCRHP07919 91 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 HMOX1P09601 288 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 MCM2P49736 904 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 IDI1Q13907 227 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 FOXD4L6Q3SYB3 417 aaPredicted RBP9.5□□□□□ -0.89
MID1-212ENST00000616003 CEP85Q6P2H3 762 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 FOXD4L3Q6VB84 417 aaPredicted RBP9.5□□□□□ -0.89
MID1-212ENST00000616003 TSHZ1Q6ZSZ6 1077 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 ZGPATQ8N5A5 531 aaKnown RBP9.5□□□□□ -0.89
MID1-212ENST00000616003 CDK19Q9BWU1 502 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 YY1AP1Q9H869 796 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 ZDHHC9Q9Y397 364 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 R3HCC1Q9Y3T6 440 aaKnown RBP9.5□□□□□ -0.89
MID1-212ENST00000616003 PTPRCP08575 1304 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 KIAA0232Q92628 1395 aa9.5□□□□□ -0.89
MID1-212ENST00000616003 ERC2O15083 957 aa9.49□□□□□ -0.89
MID1-212ENST00000616003 PRPF40AO75400 957 aaKnown RBP9.49□□□□□ -0.89
MID1-212ENST00000616003 SPTY2D1Q68D10 685 aaPredicted RBP9.49□□□□□ -0.89
MID1-212ENST00000616003 C8orf58Q8NAV2 365 aa9.49□□□□□ -0.89
MID1-212ENST00000616003 TMEM63CQ9P1W3 806 aa9.49□□□□□ -0.89
MID1-212ENST00000616003 ZHX1Q9UKY1 873 aaPredicted RBP9.49□□□□□ -0.89
MID1-212ENST00000616003 RGPD1P0DJD0 1748 aa9.49□□□□□ -0.89
MID1-212ENST00000616003 SLC20A2Q08357 652 aa9.48□□□□□ -0.89
MID1-212ENST00000616003 SASS6Q6UVJ0 657 aa9.48□□□□□ -0.89
MID1-212ENST00000616003 SYAP1Q96A49 352 aaPredicted RBP9.48□□□□□ -0.89
MID1-212ENST00000616003 GEMIN8Q9NWZ8 242 aaKnown RBP9.48□□□□□ -0.89
MID1-212ENST00000616003 CABP1Q9NZU7 370 aa9.48□□□□□ -0.89
MID1-212ENST00000616003 RBM27Q9P2N5 1060 aaKnown RBP9.48□□□□□ -0.89
MID1-212ENST00000616003 FAM208AQ9UK61 1670 aaKnown RBP9.48□□□□□ -0.89
MID1-212ENST00000616003 SYCE3A1L190 88 aa9.48□□□□□ -0.89
MID1-212ENST00000616003 IRF6O14896 467 aa9.48□□□□□ -0.89
MID1-212ENST00000616003 KIF20AO95235 890 aa9.48□□□□□ -0.89
MID1-212ENST00000616003 XPCQ01831 940 aaPredicted RBP9.48□□□□□ -0.89
MID1-212ENST00000616003 OTUD6BQ8N6M0 293 aa9.48□□□□□ -0.89
MID1-212ENST00000616003 OTUD7AQ8TE49 926 aaPredicted RBP9.48□□□□□ -0.89
MID1-212ENST00000616003 OSBPL3Q9H4L5 887 aa9.48□□□□□ -0.89
MID1-212ENST00000616003 NALCNQ8IZF0 1738 aa9.47□□□□□ -0.89
MID1-212ENST00000616003 ELL2O00472 640 aaPredicted RBP9.47□□□□□ -0.89
MID1-212ENST00000616003 HMMRO75330 724 aa9.47□□□□□ -0.89
MID1-212ENST00000616003 BRD1O95696 1058 aa9.47□□□□□ -0.89
MID1-212ENST00000616003 IL17RAQ96F46 866 aa9.47□□□□□ -0.89
MID1-212ENST00000616003 EMILIN1Q9Y6C2 1016 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms