RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 USH1CQ9Y6N9 552 aa10.8□□□□□ -0.68
COL12A1-211ENST00000615798 UBE4AQ14139 1066 aa10.8□□□□□ -0.68
COL12A1-211ENST00000615798 CEP112Q8N8E3 955 aa10.8□□□□□ -0.68
COL12A1-211ENST00000615798 MKL2Q9ULH7 1088 aa10.8□□□□□ -0.68
COL12A1-211ENST00000615798 LIMCH1Q9UPQ0 1083 aa10.8□□□□□ -0.68
COL12A1-211ENST00000615798 MICALL1Q8N3F8 863 aa10.8□□□□□ -0.68
COL12A1-211ENST00000615798 IMMTQ16891 758 aaKnown RBP10.8□□□□□ -0.68
COL12A1-211ENST00000615798 CCDC92Q53HC0 331 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-211ENST00000615798 FAM114A2Q9NRY5 505 aa10.8□□□□□ -0.68
COL12A1-211ENST00000615798 CCDC113Q9H0I3 377 aa10.79□□□□□ -0.68
COL12A1-211ENST00000615798 PRR16Q569H4 304 aa10.79□□□□□ -0.68
COL12A1-211ENST00000615798 CASQ2O14958 399 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-211ENST00000615798 HYPKQ9NX55 129 aa10.79□□□□□ -0.68
COL12A1-211ENST00000615798 DACH1Q9UI36 760 aa10.79□□□□□ -0.68
COL12A1-211ENST00000615798 GCC2Q8IWJ2 1684 aa10.79□□□□□ -0.68
COL12A1-211ENST00000615798 TTC36A6NLP5 189 aa10.79□□□□□ -0.68
COL12A1-211ENST00000615798 VPS37CA5D8V6 355 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-211ENST00000615798 LRRC43Q8N309 656 aa10.79□□□□□ -0.68
COL12A1-211ENST00000615798 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-211ENST00000615798 STIM1Q13586 685 aa10.79□□□□□ -0.68
COL12A1-211ENST00000615798 ZFP91Q96JP5 570 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-211ENST00000615798 PTPN14Q15678 1187 aa10.79□□□□□ -0.68
COL12A1-211ENST00000615798 TEX14Q8IWB6 1497 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 C22orf23Q9BZE7 217 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 ANO2Q9NQ90 1003 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 FERP16591 822 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 MCM6Q14566 821 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 DNMT1P26358 1616 aaKnown RBP10.78□□□□□ -0.68
COL12A1-211ENST00000615798 MYH10P35580 1976 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 LACTBP83111 547 aaPredicted RBP10.78□□□□□ -0.68
COL12A1-211ENST00000615798 COG6Q9Y2V7 657 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 CDC45O75419 566 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 OTUD6BQ8N6M0 293 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 UHRF1BP1Q6BDS2 1440 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 TRAK1Q9UPV9 953 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 CCDC38Q502W7 563 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 SCAF11Q99590 1463 aaKnown RBP10.78□□□□□ -0.68
COL12A1-211ENST00000615798 MAP2K2P36507 400 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 KIF5CO60282 957 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 RPAINQ86UA6 219 aa10.78□□□□□ -0.68
COL12A1-211ENST00000615798 LRRC23Q53EV4 343 aaPredicted RBP10.77□□□□□ -0.68
COL12A1-211ENST00000615798 STIM2Q9P246 746 aa10.77□□□□□ -0.68
COL12A1-211ENST00000615798 STK26Q9P289 416 aa10.77□□□□□ -0.68
COL12A1-211ENST00000615798 DUOX2Q9NRD8 1548 aa10.77□□□□□ -0.68
COL12A1-211ENST00000615798 CWC22Q9HCG8 908 aaKnown RBP10.77□□□□□ -0.68
COL12A1-211ENST00000615798 CWC25Q9NXE8 425 aaPredicted RBP10.77□□□□□ -0.68
COL12A1-211ENST00000615798 GPRASP1Q5JY77 1395 aa10.77□□□□□ -0.69
COL12A1-211ENST00000615798 GBP1P32455 592 aa10.77□□□□□ -0.69
COL12A1-211ENST00000615798 SREK1Q8WXA9 508 aaKnown RBP10.77□□□□□ -0.69
COL12A1-211ENST00000615798 MKRN1Q9UHC7 482 aaKnown RBP10.77□□□□□ -0.69
COL12A1-211ENST00000615798 CTAGE6Q86UF2 777 aa10.77□□□□□ -0.69
COL12A1-211ENST00000615798 SERPINC1P01008 464 aa10.77□□□□□ -0.69
COL12A1-211ENST00000615798 MCM5P33992 734 aa10.77□□□□□ -0.69
COL12A1-211ENST00000615798 CACNA2D3Q8IZS8 1091 aa10.77□□□□□ -0.69
COL12A1-211ENST00000615798 DDX12PQ92771 950 aa10.77□□□□□ -0.69
COL12A1-211ENST00000615798 MAP7Q14244 749 aa10.76□□□□□ -0.69
COL12A1-211ENST00000615798 CCDC83Q8IWF9 413 aa10.76□□□□□ -0.69
COL12A1-211ENST00000615798 CFAP65Q6ZU64 1925 aaKnown RBP10.76□□□□□ -0.69
COL12A1-211ENST00000615798 ANKRD45Q5TZF3 282 aa10.76□□□□□ -0.69
COL12A1-211ENST00000615798 RSPH14Q9UHP6 348 aa10.76□□□□□ -0.69
COL12A1-211ENST00000615798 ADAMTS8Q9UP79 889 aa10.76□□□□□ -0.69
COL12A1-211ENST00000615798 URB2Q14146 1524 aaKnown RBP10.76□□□□□ -0.69
COL12A1-211ENST00000615798 KIF20AO95235 890 aa10.76□□□□□ -0.69
COL12A1-211ENST00000615798 NBPF8Q3BBV2 869 aa10.76□□□□□ -0.69
COL12A1-211ENST00000615798 BRMS1Q9HCU9 246 aa10.76□□□□□ -0.69
COL12A1-211ENST00000615798 EPB41L2O43491 1005 aaKnown RBP10.76□□□□□ -0.69
COL12A1-211ENST00000615798 EBAG9O00559 213 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 RIPK4P57078 832 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 ZSCAN12O43309 604 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 AIMP1Q12904 312 aaKnown RBP10.75□□□□□ -0.69
COL12A1-211ENST00000615798 TSNAXIP1Q2TAA8 658 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 ERC2O15083 957 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 DESP17661 470 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 PDCP20941 246 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.75□□□□□ -0.69
COL12A1-211ENST00000615798 ZNF396Q96N95 335 aaPredicted RBP10.75□□□□□ -0.69
COL12A1-211ENST00000615798 SAMD9Q5K651 1589 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 CCDC94Q9BW85 323 aaPredicted RBP10.75□□□□□ -0.69
COL12A1-211ENST00000615798 AMPHP49418 695 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 PRIMPOLQ96LW4 560 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 VCXQ9H320 206 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 KIF4AO95239 1232 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 PCK1P35558 622 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 RUFY3Q7L099 469 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 HOOK3Q86VS8 718 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 TAOK3Q9H2K8 898 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 VCX3BQ9H321 246 aa10.75□□□□□ -0.69
COL12A1-211ENST00000615798 ATP11AP98196 1134 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 ZNF692Q9BU19 519 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-211ENST00000615798 SETDB1Q15047 1291 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 UIMC1Q96RL1 719 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 WDR62O43379 1518 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 FAM177A1Q8N128 213 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-211ENST00000615798 ADAMTS12P58397 1594 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 MGEA5O60502 916 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 GNAI3P08754 354 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 RILPL2Q969X0 211 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 HIP1O00291 1037 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 DRC1Q96MC2 740 aa10.74□□□□□ -0.69
COL12A1-211ENST00000615798 TRIM4Q9C037 500 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms