RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 C1orf141Q5JVX7 400 aa16.44■□□□□ 0.22
FOXN3-219ENST00000615335 SPG7Q9UQ90 795 aa16.44■□□□□ 0.22
FOXN3-219ENST00000615335 USP21Q9UK80 565 aa16.44■□□□□ 0.22
FOXN3-219ENST00000615335 MAP3K5Q99683 1374 aa16.43■□□□□ 0.22
FOXN3-219ENST00000615335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.43■□□□□ 0.222e-6■□□□□ 10.4
FOXN3-219ENST00000615335 BCL9LQ86UU0 1499 aa16.43■□□□□ 0.22
FOXN3-219ENST00000615335 AKAP4Q5JQC9 854 aa16.42■□□□□ 0.22
FOXN3-219ENST00000615335 SPATA31A1Q5TZJ5 1347 aa16.42■□□□□ 0.22
FOXN3-219ENST00000615335 PARP4Q9UKK3 1724 aaKnown RBP16.42■□□□□ 0.22
FOXN3-219ENST00000615335 HTATSF1O43719 755 aaKnown RBP16.41■□□□□ 0.22
FOXN3-219ENST00000615335 C8orf34Q49A92 452 aa16.41■□□□□ 0.22
FOXN3-219ENST00000615335 OVOS2A0A0G2JMS6 1433 aa16.41■□□□□ 0.22
FOXN3-219ENST00000615335 ZCRB1Q8TBF4 217 aaKnown RBP16.41■□□□□ 0.22
FOXN3-219ENST00000615335 SPATA31A5Q5VU36 1347 aa16.41■□□□□ 0.22
FOXN3-219ENST00000615335 SPATA31A7Q8IWB4 1347 aa16.41■□□□□ 0.22
FOXN3-219ENST00000615335 RGS3P49796 1198 aa16.4■□□□□ 0.22
FOXN3-219ENST00000615335 AFF2P51816 1311 aa16.4■□□□□ 0.22
FOXN3-219ENST00000615335 PLEKHG2Q9H7P9 1386 aa16.4■□□□□ 0.22
FOXN3-219ENST00000615335 SLC4A3P48751 1232 aa16.4■□□□□ 0.22
FOXN3-219ENST00000615335 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
FOXN3-219ENST00000615335 MPRIPQ6WCQ1 1025 aa16.4■□□□□ 0.22
FOXN3-219ENST00000615335 MYH16Q9H6N6 1097 aa16.4■□□□□ 0.22
FOXN3-219ENST00000615335 IL16Q14005 1332 aa16.4■□□□□ 0.22
FOXN3-219ENST00000615335 VPS72Q15906 364 aa16.39■□□□□ 0.21
FOXN3-219ENST00000615335 THRAP3Q9Y2W1 955 aaKnown RBP16.39■□□□□ 0.21
FOXN3-219ENST00000615335 IFNL2Q8IZJ0 200 aa16.39■□□□□ 0.21
FOXN3-219ENST00000615335 IL17REQ8NFR9 667 aa16.39■□□□□ 0.21
FOXN3-219ENST00000615335 PKD1L3Q7Z443 1732 aa16.38■□□□□ 0.21
FOXN3-219ENST00000615335 CYP27B1O15528 508 aa16.38■□□□□ 0.21
FOXN3-219ENST00000615335 PHKG2P15735 406 aa16.38■□□□□ 0.21
FOXN3-219ENST00000615335 DDX54Q8TDD1 881 aaKnown RBP16.38■□□□□ 0.21
FOXN3-219ENST00000615335 TSR2Q969E8 191 aaKnown RBP16.38■□□□□ 0.21
FOXN3-219ENST00000615335 LGR6Q9HBX8 967 aa16.38■□□□□ 0.21
FOXN3-219ENST00000615335 CANXP27824 592 aaKnown RBP16.37■□□□□ 0.21
FOXN3-219ENST00000615335 GNAI1P63096 354 aa16.37■□□□□ 0.21
FOXN3-219ENST00000615335 IFT57Q9NWB7 429 aa16.37■□□□□ 0.21
FOXN3-219ENST00000615335 PCDH11XQ9BZA7 1347 aa16.37■□□□□ 0.21
FOXN3-219ENST00000615335 PCDH11YQ9BZA8 1340 aa16.37■□□□□ 0.21
FOXN3-219ENST00000615335 CFAP44Q96MT7 982 aa16.37■□□□□ 0.21
FOXN3-219ENST00000615335 PDIA4P13667 645 aaKnown RBP16.36■□□□□ 0.21
FOXN3-219ENST00000615335 CDCA7Q9BWT1 371 aaPredicted RBP16.36■□□□□ 0.21
FOXN3-219ENST00000615335 DISP2A7MBM2 1401 aa16.36■□□□□ 0.21
FOXN3-219ENST00000615335 EXOC5O00471 708 aa16.36■□□□□ 0.21
FOXN3-219ENST00000615335 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.36■□□□□ 0.21
FOXN3-219ENST00000615335 RNMTO43148 476 aaKnown RBP16.35■□□□□ 0.21
FOXN3-219ENST00000615335 IGHDP01880 384 aa16.35■□□□□ 0.21
FOXN3-219ENST00000615335 FAM98CQ17RN3 349 aaKnown RBP16.35■□□□□ 0.21
FOXN3-219ENST00000615335 GOLGA6L3A6NEY3 463 aa16.35■□□□□ 0.21
FOXN3-219ENST00000615335 BARGINQ6ZT62 677 aa16.35■□□□□ 0.21
FOXN3-219ENST00000615335 MAP7D2Q96T17 732 aa16.35■□□□□ 0.21
FOXN3-219ENST00000615335 VIRMAQ69YN4 1812 aaKnown RBP16.35■□□□□ 0.21
FOXN3-219ENST00000615335 WNK3Q9BYP7 1800 aa16.34■□□□□ 0.21
FOXN3-219ENST00000615335 HSP90AB1P08238 724 aaKnown RBP16.34■□□□□ 0.21
FOXN3-219ENST00000615335 TEFQ10587 303 aa16.34■□□□□ 0.21
FOXN3-219ENST00000615335 CEMIPQ8WUJ3 1361 aa16.34■□□□□ 0.21
FOXN3-219ENST00000615335 ZNF853P0CG23 659 aa16.34■□□□□ 0.21
FOXN3-219ENST00000615335 PANK1Q8TE04 598 aa16.34■□□□□ 0.21
FOXN3-219ENST00000615335 CLUAP1Q96AJ1 413 aa16.34■□□□□ 0.21
FOXN3-219ENST00000615335 MBIPQ9NS73 344 aa16.34■□□□□ 0.21
FOXN3-219ENST00000615335 MIS18AQ9NYP9 233 aa16.34■□□□□ 0.21
FOXN3-219ENST00000615335 TRPC5Q9UL62 973 aaPredicted RBP16.34■□□□□ 0.21
FOXN3-219ENST00000615335 COG6Q9Y2V7 657 aa16.34■□□□□ 0.21
FOXN3-219ENST00000615335 A0A0G2JS52 829 aa16.33■□□□□ 0.2
FOXN3-219ENST00000615335 DDB1Q16531 1140 aa16.33■□□□□ 0.2
FOXN3-219ENST00000615335 DCAF5Q96JK2 942 aa16.33■□□□□ 0.2
FOXN3-219ENST00000615335 TAF7Q15545 349 aaPredicted RBP16.33■□□□□ 0.2
FOXN3-219ENST00000615335 GJD4Q96KN9 370 aaPredicted RBP16.33■□□□□ 0.2
FOXN3-219ENST00000615335 SHANK3Q9BYB0 1731 aa16.32■□□□□ 0.2
FOXN3-219ENST00000615335 CHL1O00533 1208 aa16.32■□□□□ 0.2
FOXN3-219ENST00000615335 XRCC6P12956 609 aaKnown RBP eCLIP16.32■□□□□ 0.2
FOXN3-219ENST00000615335 QTRT2Q9H974 415 aaKnown RBP16.32■□□□□ 0.2
FOXN3-219ENST00000615335 FSD2A1L4K1 749 aa16.31■□□□□ 0.2
FOXN3-219ENST00000615335 EXOSC9Q06265 439 aaKnown RBP16.31■□□□□ 0.2
FOXN3-219ENST00000615335 TSPYL4Q9UJ04 414 aa16.31■□□□□ 0.2
FOXN3-219ENST00000615335 LRRC37A3O60309 1634 aa16.31■□□□□ 0.2
FOXN3-219ENST00000615335 RARSP54136 660 aaKnown RBP16.31■□□□□ 0.2
FOXN3-219ENST00000615335 KDM6AO15550 1401 aaPredicted RBP16.31■□□□□ 0.2
FOXN3-219ENST00000615335 SCN11AQ9UI33 1791 aa16.3■□□□□ 0.2
FOXN3-219ENST00000615335 ATRNO75882 1429 aa16.3■□□□□ 0.2
FOXN3-219ENST00000615335 TNS2Q63HR2 1409 aa16.3■□□□□ 0.2
FOXN3-219ENST00000615335 KAT6BQ8WYB5 2073 aa16.29■□□□□ 0.2
FOXN3-219ENST00000615335 BTBD11A6QL63 1104 aa16.29■□□□□ 0.2
FOXN3-219ENST00000615335 ESPNB1AK53 854 aa16.29■□□□□ 0.2
FOXN3-219ENST00000615335 NKX1-1Q15270 411 aaPredicted RBP16.29■□□□□ 0.2
FOXN3-219ENST00000615335 NFATC2IPQ8NCF5 419 aa16.29■□□□□ 0.2
FOXN3-219ENST00000615335 SLC52A2Q9HAB3 445 aa16.29■□□□□ 0.2
FOXN3-219ENST00000615335 NCLP19338 710 aaKnown RBP16.28■□□□□ 0.2
FOXN3-219ENST00000615335 ADAMTS7Q9UKP4 1686 aa16.28■□□□□ 0.2
FOXN3-219ENST00000615335 ELL2O00472 640 aaPredicted RBP16.28■□□□□ 0.2
FOXN3-219ENST00000615335 CABP4P57796 275 aa16.28■□□□□ 0.2
FOXN3-219ENST00000615335 ZNF772Q68DY9 489 aaPredicted RBP16.28■□□□□ 0.2
FOXN3-219ENST00000615335 SMAP1Q8IYB5 467 aaPredicted RBP16.28■□□□□ 0.2
FOXN3-219ENST00000615335 GLI3P10071 1580 aa16.27■□□□□ 0.2
FOXN3-219ENST00000615335 BABAM1Q9NWV8 329 aa16.27■□□□□ 0.19
FOXN3-219ENST00000615335 MRE11P49959 708 aa16.26■□□□□ 0.19
FOXN3-219ENST00000615335 ERVV-2B6SEH9 535 aa16.26■□□□□ 0.19
FOXN3-219ENST00000615335 ISY1Q9ULR0 285 aaKnown RBP16.26■□□□□ 0.19
FOXN3-219ENST00000615335 TERF1P54274 439 aa16.25■□□□□ 0.19
FOXN3-219ENST00000615335 C8orf58Q8NAV2 365 aa16.25■□□□□ 0.19
FOXN3-219ENST00000615335 KRT24Q2M2I5 525 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms