RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 WDR17Q8IZU2 1322 aa11.1□□□□□ -0.63
VPS11-206ENST00000614944 MAP3K5Q99683 1374 aa11.1□□□□□ -0.63
VPS11-206ENST00000614944 CERKQ8TCT0 537 aa11.1□□□□□ -0.63
VPS11-206ENST00000614944 HMOX1P09601 288 aa11.09□□□□□ -0.63
VPS11-206ENST00000614944 MAP7D2Q96T17 732 aa11.09□□□□□ -0.63
VPS11-206ENST00000614944 GNAI1P63096 354 aa11.09□□□□□ -0.63
VPS11-206ENST00000614944 NBPF6Q5VWK0 638 aa11.09□□□□□ -0.63
VPS11-206ENST00000614944 AEBP1Q8IUX7 1158 aa11.09□□□□□ -0.63
VPS11-206ENST00000614944 CDCA7LQ96GN5 454 aa11.09□□□□□ -0.63
VPS11-206ENST00000614944 NBPF4Q96M43 638 aa11.09□□□□□ -0.63
VPS11-206ENST00000614944 RCAN3Q9UKA8 241 aa11.09□□□□□ -0.63
VPS11-206ENST00000614944 PATL2C9JE40 543 aaKnown RBP11.08□□□□□ -0.64
VPS11-206ENST00000614944 PTMAP06454 111 aaKnown RBP11.08□□□□□ -0.64
VPS11-206ENST00000614944 AXIN2Q9Y2T1 843 aa11.08□□□□□ -0.64
VPS11-206ENST00000614944 NFKBIBQ15653 356 aa11.08□□□□□ -0.64
VPS11-206ENST00000614944 CFAP44Q96MT7 982 aa11.08□□□□□ -0.64
VPS11-206ENST00000614944 PAPPAQ13219 1627 aa11.08□□□□□ -0.64
VPS11-206ENST00000614944 CACNA1FO60840 1977 aa11.08□□□□□ -0.64
VPS11-206ENST00000614944 SLIT2O94813 1529 aa11.07□□□□□ -0.64
VPS11-206ENST00000614944 DISP2A7MBM2 1401 aa11.07□□□□□ -0.64
VPS11-206ENST00000614944 JCADQ9P266 1359 aa11.07□□□□□ -0.64
VPS11-206ENST00000614944 PLEKHO1Q53GL0 409 aaPredicted RBP11.07□□□□□ -0.64
VPS11-206ENST00000614944 CARD10Q9BWT7 1032 aa11.07□□□□□ -0.64
VPS11-206ENST00000614944 SPINK5Q9NQ38 1064 aaPredicted RBP11.07□□□□□ -0.64
VPS11-206ENST00000614944 N4BP2Q86UW6 1770 aaPredicted RBP11.07□□□□□ -0.64
VPS11-206ENST00000614944 MTHFSDQ2M296 383 aaKnown RBP11.07□□□□□ -0.64
VPS11-206ENST00000614944 HDAC5Q9UQL6 1122 aa11.07□□□□□ -0.64
VPS11-206ENST00000614944 SPATA31A6Q5VVP1 1343 aa11.06□□□□□ -0.64
VPS11-206ENST00000614944 AKAP4Q5JQC9 854 aa11.06□□□□□ -0.64
VPS11-206ENST00000614944 GNAT3A8MTJ3 354 aa11.06□□□□□ -0.64
VPS11-206ENST00000614944 CHL1O00533 1208 aa11.05□□□□□ -0.64
VPS11-206ENST00000614944 MEGF6O75095 1541 aa11.05□□□□□ -0.64
VPS11-206ENST00000614944 DMTNQ08495 405 aa11.05□□□□□ -0.64
VPS11-206ENST00000614944 ALDH1L2Q3SY69 923 aa11.05□□□□□ -0.64
VPS11-206ENST00000614944 LMOD2Q6P5Q4 547 aa11.05□□□□□ -0.64
VPS11-206ENST00000614944 SOX12O15370 315 aa11.05□□□□□ -0.64
VPS11-206ENST00000614944 APPP05067 770 aa11.05□□□□□ -0.64
VPS11-206ENST00000614944 RRP1P56182 461 aaKnown RBP11.05□□□□□ -0.64
VPS11-206ENST00000614944 B4GALNT3Q6L9W6 998 aa11.05□□□□□ -0.64
VPS11-206ENST00000614944 TMED8Q6PL24 325 aaPredicted RBP11.05□□□□□ -0.64
VPS11-206ENST00000614944 MMP14P50281 582 aa11.04□□□□□ -0.64
VPS11-206ENST00000614944 GRIPAP1Q4V328 841 aa11.04□□□□□ -0.64
VPS11-206ENST00000614944 DNTTIP2Q5QJE6 756 aaKnown RBP11.04□□□□□ -0.64
VPS11-206ENST00000614944 RRP7AQ9Y3A4 280 aaKnown RBP11.04□□□□□ -0.64
VPS11-206ENST00000614944 UBR2Q8IWV8 1755 aa11.04□□□□□ -0.64
VPS11-206ENST00000614944 CICQ96RK0 1608 aaPredicted RBP11.04□□□□□ -0.64
VPS11-206ENST00000614944 PRDM11Q9NQV5 511 aa11.04□□□□□ -0.64
VPS11-206ENST00000614944 ZC3H6P61129 1189 aaKnown RBP11.03□□□□□ -0.64
VPS11-206ENST00000614944 MAPK8IP2Q13387 824 aaPredicted RBP11.03□□□□□ -0.64
VPS11-206ENST00000614944 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.03□□□□□ -0.64
VPS11-206ENST00000614944 THRAP3Q9Y2W1 955 aaKnown RBP11.03□□□□□ -0.64
VPS11-206ENST00000614944 L1TD1Q5T7N2 865 aaKnown RBP11.03□□□□□ -0.64
VPS11-206ENST00000614944 CDCA7Q9BWT1 371 aaPredicted RBP11.02□□□□□ -0.64
VPS11-206ENST00000614944 SPG7Q9UQ90 795 aa11.02□□□□□ -0.64
VPS11-206ENST00000614944 LAMB4A4D0S4 1761 aa11.02□□□□□ -0.65
VPS11-206ENST00000614944 FAM83GA6ND36 823 aa11.02□□□□□ -0.65
VPS11-206ENST00000614944 IGSF3O75054 1194 aa11.02□□□□□ -0.65
VPS11-206ENST00000614944 HSP90AB1P08238 724 aaKnown RBP11.02□□□□□ -0.65
VPS11-206ENST00000614944 NKX1-1Q15270 411 aaPredicted RBP11.02□□□□□ -0.65
VPS11-206ENST00000614944 CABLES1Q8TDN4 633 aa11.02□□□□□ -0.65
VPS11-206ENST00000614944 RTF1Q92541 710 aaKnown RBP11.02□□□□□ -0.65
VPS11-206ENST00000614944 UBAP1LF5GYI3 381 aa11.02□□□□□ -0.65
VPS11-206ENST00000614944 TATP17735 454 aaPredicted RBP11.02□□□□□ -0.65
VPS11-206ENST00000614944 PTMSP20962 102 aa11.02□□□□□ -0.65
VPS11-206ENST00000614944 ZNF622Q969S3 477 aaKnown RBP eCLIP11.02□□□□□ -0.65
VPS11-206ENST00000614944 HOXB7P09629 217 aa11.01□□□□□ -0.65
VPS11-206ENST00000614944 KIF20AO95235 890 aa11.01□□□□□ -0.65
VPS11-206ENST00000614944 RARSP54136 660 aaKnown RBP11.01□□□□□ -0.65
VPS11-206ENST00000614944 PDE3AQ14432 1141 aa11.01□□□□□ -0.65
VPS11-206ENST00000614944 ZNF831Q5JPB2 1677 aa11.01□□□□□ -0.65
VPS11-206ENST00000614944 KCNA4P22459 653 aa11□□□□□ -0.65
VPS11-206ENST00000614944 HEG1Q9ULI3 1381 aa11□□□□□ -0.65
VPS11-206ENST00000614944 THSD7AQ9UPZ6 1657 aa11□□□□□ -0.65
VPS11-206ENST00000614944 RAPGEF4Q8WZA2 1011 aa11□□□□□ -0.65
VPS11-206ENST00000614944 ZNF592Q92610 1267 aa11□□□□□ -0.65
VPS11-206ENST00000614944 MS4A1P11836 297 aa11□□□□□ -0.65
VPS11-206ENST00000614944 NEUROD2Q15784 382 aa11□□□□□ -0.65
VPS11-206ENST00000614944 TAF3Q5VWG9 929 aa11□□□□□ -0.65
VPS11-206ENST00000614944 MBIPQ9NS73 344 aa11□□□□□ -0.65
VPS11-206ENST00000614944 GLI3P10071 1580 aa10.99□□□□□ -0.65
VPS11-206ENST00000614944 FAM43BQ6ZT52 329 aaPredicted RBP10.99□□□□□ -0.65
VPS11-206ENST00000614944 ARHGAP45Q92619 1136 aa10.99□□□□□ -0.65
VPS11-206ENST00000614944 PLCD4Q9BRC7 762 aa10.99□□□□□ -0.65
VPS11-206ENST00000614944 TOGARAM1Q9Y4F4 1720 aa10.99□□□□□ -0.65
VPS11-206ENST00000614944 AXDND1Q5T1B0 1012 aaPredicted RBP10.99□□□□□ -0.65
VPS11-206ENST00000614944 LTV1Q96GA3 475 aaPredicted RBP10.99□□□□□ -0.65
VPS11-206ENST00000614944 PCDH11XQ9BZA7 1347 aa10.99□□□□□ -0.65
VPS11-206ENST00000614944 PCDH11YQ9BZA8 1340 aa10.99□□□□□ -0.65
VPS11-206ENST00000614944 IBTKQ9P2D0 1353 aaPredicted RBP10.99□□□□□ -0.65
VPS11-206ENST00000614944 KDM6AO15550 1401 aaPredicted RBP10.99□□□□□ -0.65
VPS11-206ENST00000614944 CLSTN1O94985 981 aa10.99□□□□□ -0.65
VPS11-206ENST00000614944 MYCNP04198 464 aaPredicted RBP10.99□□□□□ -0.65
VPS11-206ENST00000614944 HMGB1P09429 215 aaKnown RBP10.99□□□□□ -0.65
VPS11-206ENST00000614944 TAF7Q15545 349 aaPredicted RBP10.99□□□□□ -0.65
VPS11-206ENST00000614944 IL17REQ8NFR9 667 aa10.99□□□□□ -0.65
VPS11-206ENST00000614944 TNS2Q63HR2 1409 aa10.99□□□□□ -0.65
VPS11-206ENST00000614944 KIF16BQ96L93 1317 aa10.98□□□□□ -0.65
VPS11-206ENST00000614944 RNMTO43148 476 aaKnown RBP10.98□□□□□ -0.65
VPS11-206ENST00000614944 PHKG2P15735 406 aa10.98□□□□□ -0.65
VPS11-206ENST00000614944 C1orf141Q5JVX7 400 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms