RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 ANXA1P04083 346 aa24.51■■□□□ 1.51
SMARCD2-212ENST00000613943 KCNH5Q8NCM2 988 aa24.5■■□□□ 1.51
SMARCD2-212ENST00000613943 FAM208AQ9UK61 1670 aaKnown RBP24.49■■□□□ 1.51
SMARCD2-212ENST00000613943 HMMRO75330 724 aa24.49■■□□□ 1.51
SMARCD2-212ENST00000613943 ZNF530Q6P9A1 599 aaPredicted RBP24.49■■□□□ 1.51
SMARCD2-212ENST00000613943 LRRFIP2Q9Y608 721 aaKnown RBP24.49■■□□□ 1.51
SMARCD2-212ENST00000613943 RGPD2P0DJD1 1756 aa24.49■■□□□ 1.51
SMARCD2-212ENST00000613943 AXIN2Q9Y2T1 843 aa24.49■■□□□ 1.51
SMARCD2-212ENST00000613943 CEMIPQ8WUJ3 1361 aa24.48■■□□□ 1.51
SMARCD2-212ENST00000613943 HSP90AB1P08238 724 aaKnown RBP24.47■■□□□ 1.51
SMARCD2-212ENST00000613943 DDX17Q92841 729 aaKnown RBP24.47■■□□□ 1.51
SMARCD2-212ENST00000613943 CHMP5Q9NZZ3 219 aa24.47■■□□□ 1.51
SMARCD2-212ENST00000613943 ADAMTSL3P82987 1691 aa24.47■■□□□ 1.51
SMARCD2-212ENST00000613943 PROSER2Q86WR7 435 aaPredicted RBP24.47■■□□□ 1.51
SMARCD2-212ENST00000613943 IL27Q8NEV9 243 aa24.47■■□□□ 1.51
SMARCD2-212ENST00000613943 ARHGEF25Q86VW2 580 aa24.46■■□□□ 1.51
SMARCD2-212ENST00000613943 SNX21Q969T3 373 aa24.46■■□□□ 1.51
SMARCD2-212ENST00000613943 CHPF2Q9P2E5 772 aa24.46■■□□□ 1.51
SMARCD2-212ENST00000613943 EIF4A1P60842 406 aaKnown RBP24.46■■□□□ 1.51
SMARCD2-212ENST00000613943 ANKRD24Q8TF21 1146 aa24.45■■□□□ 1.51
SMARCD2-212ENST00000613943 USP44Q9H0E7 712 aa24.45■■□□□ 1.51
SMARCD2-212ENST00000613943 BRPF3Q9ULD4 1205 aa24.45■■□□□ 1.5
SMARCD2-212ENST00000613943 PXDNQ92626 1479 aa24.45■■□□□ 1.5
SMARCD2-212ENST00000613943 BTBD11A6QL63 1104 aa24.44■■□□□ 1.5
SMARCD2-212ENST00000613943 TEFQ10587 303 aa24.44■■□□□ 1.5
SMARCD2-212ENST00000613943 GNAI3P08754 354 aa24.43■■□□□ 1.5
SMARCD2-212ENST00000613943 PDE1AP54750 535 aa24.43■■□□□ 1.5
SMARCD2-212ENST00000613943 ZC3H6P61129 1189 aaKnown RBP24.43■■□□□ 1.5
SMARCD2-212ENST00000613943 KRT28Q7Z3Y7 464 aa24.43■■□□□ 1.5
SMARCD2-212ENST00000613943 MCM4P33991 863 aa24.42■■□□□ 1.5
SMARCD2-212ENST00000613943 NCOA3Q9Y6Q9 1424 aa24.42■■□□□ 1.5
SMARCD2-212ENST00000613943 BABAM1Q9NWV8 329 aa24.41■■□□□ 1.5
SMARCD2-212ENST00000613943 PRAMEF22A3QJZ6 481 aa24.41■■□□□ 1.5
SMARCD2-212ENST00000613943 HSP90AA1P07900 732 aaKnown RBP24.41■■□□□ 1.5
SMARCD2-212ENST00000613943 AKAP4Q5JQC9 854 aa24.41■■□□□ 1.5
SMARCD2-212ENST00000613943 USP26Q9BXU7 913 aa24.41■■□□□ 1.5
SMARCD2-212ENST00000613943 UBTFL1P0CB47 393 aaPredicted RBP24.4■■□□□ 1.5
SMARCD2-212ENST00000613943 DDIT3P35638 169 aa24.4■■□□□ 1.5
SMARCD2-212ENST00000613943 ATP8B2P98198 1209 aa24.4■■□□□ 1.5
SMARCD2-212ENST00000613943 PLEKHO1Q53GL0 409 aaPredicted RBP24.4■■□□□ 1.5
SMARCD2-212ENST00000613943 ARXQ96QS3 562 aa24.4■■□□□ 1.5
SMARCD2-212ENST00000613943 LRRCC1Q9C099 1032 aa24.4■■□□□ 1.5
SMARCD2-212ENST00000613943 GZF1Q9H116 711 aaPredicted RBP24.39■■□□□ 1.5
SMARCD2-212ENST00000613943 PI4KAP2A4QPH2 592 aa24.39■■□□□ 1.49
SMARCD2-212ENST00000613943 K7ELQ4 463 aaPredicted RBP24.39■■□□□ 1.49
SMARCD2-212ENST00000613943 PI4KAP1Q8N8J0 262 aa24.39■■□□□ 1.49
SMARCD2-212ENST00000613943 IL1RAPL2Q9NP60 686 aa24.39■■□□□ 1.49
SMARCD2-212ENST00000613943 NBPF7P0C2Y1 421 aaPredicted RBP24.38■■□□□ 1.49
SMARCD2-212ENST00000613943 RNMTO43148 476 aaKnown RBP24.38■■□□□ 1.49
SMARCD2-212ENST00000613943 C1orf141Q5JVX7 400 aa24.38■■□□□ 1.49
SMARCD2-212ENST00000613943 RTN4Q9NQC3 1192 aaKnown RBP24.38■■□□□ 1.49
SMARCD2-212ENST00000613943 SRCIN1Q9C0H9 1055 aa24.36■■□□□ 1.49
SMARCD2-212ENST00000613943 MED1Q15648 1581 aaPredicted RBP24.36■■□□□ 1.49
SMARCD2-212ENST00000613943 PROSER3Q2NL68 480 aa24.35■■□□□ 1.49
SMARCD2-212ENST00000613943 SOS1Q07889 1333 aaPredicted RBP24.35■■□□□ 1.49
SMARCD2-212ENST00000613943 IBTKQ9P2D0 1353 aaPredicted RBP24.35■■□□□ 1.49
SMARCD2-212ENST00000613943 MX1P20591 662 aa24.35■■□□□ 1.49
SMARCD2-212ENST00000613943 CASC1Q6TDU7 716 aa24.35■■□□□ 1.49
SMARCD2-212ENST00000613943 SALL3Q9BXA9 1300 aa24.35■■□□□ 1.49
SMARCD2-212ENST00000613943 C1orf167Q5SNV9 1468 aa24.35■■□□□ 1.49
SMARCD2-212ENST00000613943 PPP1R42Q7Z4L9 355 aa24.34■■□□□ 1.49
SMARCD2-212ENST00000613943 TNPO1Q92973 898 aaKnown RBP24.34■■□□□ 1.49
SMARCD2-212ENST00000613943 OSBPL3Q9H4L5 887 aa24.34■■□□□ 1.49
SMARCD2-212ENST00000613943 CABLES1Q8TDN4 633 aa24.34■■□□□ 1.49
SMARCD2-212ENST00000613943 SLIT3O75094 1523 aa24.33■■□□□ 1.49
SMARCD2-212ENST00000613943 RILPL2Q969X0 211 aa24.33■■□□□ 1.49
SMARCD2-212ENST00000613943 AMOTQ4VCS5 1084 aa24.33■■□□□ 1.48
SMARCD2-212ENST00000613943 NUTM1Q86Y26 1132 aa24.33■■□□□ 1.48
SMARCD2-212ENST00000613943 UNC5CLQ8IV45 518 aa24.33■■□□□ 1.48
SMARCD2-212ENST00000613943 DNAAF4Q8WXU2 420 aa24.33■■□□□ 1.48
SMARCD2-212ENST00000613943 C19orf44Q9H6X5 657 aa24.33■■□□□ 1.48
SMARCD2-212ENST00000613943 TRIM6-TRIM34B2RNG4 842 aa24.32■■□□□ 1.48
SMARCD2-212ENST00000613943 BEND3Q5T5X7 828 aa24.32■■□□□ 1.48
SMARCD2-212ENST00000613943 SURF6O75683 361 aaKnown RBP24.31■■□□□ 1.48
SMARCD2-212ENST00000613943 ADCY9O60503 1353 aa24.31■■□□□ 1.48
SMARCD2-212ENST00000613943 SRGAP3O43295 1099 aa24.3■■□□□ 1.48
SMARCD2-212ENST00000613943 PXDNLA1KZ92 1463 aa24.3■■□□□ 1.48
SMARCD2-212ENST00000613943 ERBB3P21860 1342 aa24.3■■□□□ 1.48
SMARCD2-212ENST00000613943 ERC2O15083 957 aa24.3■■□□□ 1.48
SMARCD2-212ENST00000613943 MAP4K4O95819 1239 aaPredicted RBP24.3■■□□□ 1.48
SMARCD2-212ENST00000613943 RABEP1Q15276 862 aa24.3■■□□□ 1.48
SMARCD2-212ENST00000613943 SSH3Q8TE77 659 aa24.29■■□□□ 1.48
SMARCD2-212ENST00000613943 KDM3BQ7LBC6 1761 aa24.29■■□□□ 1.48
SMARCD2-212ENST00000613943 TRAK2O60296 914 aa24.29■■□□□ 1.48
SMARCD2-212ENST00000613943 GIGYF1O75420 1035 aaPredicted RBP24.29■■□□□ 1.48
SMARCD2-212ENST00000613943 SLC39A6Q13433 755 aa24.29■■□□□ 1.48
SMARCD2-212ENST00000613943 NLRP2Q9NX02 1062 aa24.29■■□□□ 1.48
SMARCD2-212ENST00000613943 PHRF1Q9P1Y6 1649 aaKnown RBP24.28■■□□□ 1.48
SMARCD2-212ENST00000613943 LMO7Q8WWI1 1683 aa24.28■■□□□ 1.48
SMARCD2-212ENST00000613943 TRPM3Q9HCF6 1732 aaPredicted RBP24.28■■□□□ 1.48
SMARCD2-212ENST00000613943 REC8O95072 547 aa24.27■■□□□ 1.48
SMARCD2-212ENST00000613943 HOXB7P09629 217 aa24.27■■□□□ 1.48
SMARCD2-212ENST00000613943 RAB3GAP1Q15042 981 aa24.27■■□□□ 1.48
SMARCD2-212ENST00000613943 CHRNA2Q15822 529 aa24.27■■□□□ 1.48
SMARCD2-212ENST00000613943 MAP3K2Q9Y2U5 619 aa24.27■■□□□ 1.48
SMARCD2-212ENST00000613943 TMEM94Q12767 1356 aa24.27■■□□□ 1.48
SMARCD2-212ENST00000613943 ATF3P18847 181 aa24.27■■□□□ 1.48
SMARCD2-212ENST00000613943 SSFA2P28290 1259 aa24.27■■□□□ 1.48
SMARCD2-212ENST00000613943 CWF19L2Q2TBE0 894 aaKnown RBP24.27■■□□□ 1.48
SMARCD2-212ENST00000613943 CACNA1FO60840 1977 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms