RNA–Protein interactions for RNA: ENST00000613299.1

CRX-207, Transcript of cone-rod homeobox, humanhuman

TSL 3 BASIC

Gene CRX, Length 4,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-207ENST00000613299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.66□□□□□ -0.54
CRX-207ENST00000613299 DBF4Q9UBU7 674 aaPredicted RBP11.66□□□□□ -0.54
CRX-207ENST00000613299 ABCC4O15439 1325 aa11.66□□□□□ -0.54
CRX-207ENST00000613299 LMTK3Q96Q04 1460 aa11.66□□□□□ -0.54
CRX-207ENST00000613299 INTS3Q68E01 1043 aaKnown RBP11.66□□□□□ -0.54
CRX-207ENST00000613299 NCAPD2Q15021 1401 aa11.65□□□□□ -0.54
CRX-207ENST00000613299 LGR6Q9HBX8 967 aa11.65□□□□□ -0.54
CRX-207ENST00000613299 C9orf78Q9NZ63 289 aaPredicted RBP11.65□□□□□ -0.54
CRX-207ENST00000613299 ZBTB7BO15156 539 aaPredicted RBP11.65□□□□□ -0.54
CRX-207ENST00000613299 CHD1LQ86WJ1 897 aa11.65□□□□□ -0.54
CRX-207ENST00000613299 DCAF5Q96JK2 942 aa11.65□□□□□ -0.54
CRX-207ENST00000613299 CCDC9Q9Y3X0 531 aaKnown RBP11.65□□□□□ -0.54
CRX-207ENST00000613299 CRB1P82279 1406 aa11.65□□□□□ -0.54
CRX-207ENST00000613299 ZCRB1Q8TBF4 217 aaKnown RBP11.64□□□□□ -0.55
CRX-207ENST00000613299 HYPKQ9NX55 129 aa11.64□□□□□ -0.55
CRX-207ENST00000613299 USP35Q9P2H5 1018 aa11.64□□□□□ -0.55
CRX-207ENST00000613299 RIC3Q7Z5B4 369 aa11.64□□□□□ -0.55
CRX-207ENST00000613299 DDX54Q8TDD1 881 aaKnown RBP11.64□□□□□ -0.55
CRX-207ENST00000613299 PEAK1Q9H792 1746 aa11.64□□□□□ -0.55
CRX-207ENST00000613299 F6X3S4 739 aa11.64□□□□□ -0.55
CRX-207ENST00000613299 AXIN2Q9Y2T1 843 aa11.63□□□□□ -0.55
CRX-207ENST00000613299 TOM1O60784 492 aa11.63□□□□□ -0.55
CRX-207ENST00000613299 IL2RBP14784 551 aa11.63□□□□□ -0.55
CRX-207ENST00000613299 SKAP1Q86WV1 359 aa11.63□□□□□ -0.55
CRX-207ENST00000613299 ARXQ96QS3 562 aa11.63□□□□□ -0.55
CRX-207ENST00000613299 EIF4A1P60842 406 aaKnown RBP11.63□□□□□ -0.55
CRX-207ENST00000613299 FMNL2Q96PY5 1086 aa11.63□□□□□ -0.55
CRX-207ENST00000613299 HSP90AB4PQ58FF6 505 aa11.62□□□□□ -0.55
CRX-207ENST00000613299 SMC5Q8IY18 1101 aa11.62□□□□□ -0.55
CRX-207ENST00000613299 PCDH11XQ9BZA7 1347 aa11.62□□□□□ -0.55
CRX-207ENST00000613299 PCDH11YQ9BZA8 1340 aa11.62□□□□□ -0.55
CRX-207ENST00000613299 AIMP1Q12904 312 aaKnown RBP11.62□□□□□ -0.55
CRX-207ENST00000613299 DNAAF4Q8WXU2 420 aa11.62□□□□□ -0.55
CRX-207ENST00000613299 PRKCSHP14314 528 aaPredicted RBP11.62□□□□□ -0.55
CRX-207ENST00000613299 NFAT5O94916 1531 aa11.61□□□□□ -0.55
CRX-207ENST00000613299 PHKG2P15735 406 aa11.61□□□□□ -0.55
CRX-207ENST00000613299 ANKRD44Q8N8A2 993 aa11.61□□□□□ -0.55
CRX-207ENST00000613299 SLC52A2Q9HAB3 445 aa11.61□□□□□ -0.55
CRX-207ENST00000613299 CHPF2Q9P2E5 772 aa11.61□□□□□ -0.55
CRX-207ENST00000613299 SLIT3O75094 1523 aa11.61□□□□□ -0.55
CRX-207ENST00000613299 SNRPA1P09661 255 aaKnown RBP11.6□□□□□ -0.55
CRX-207ENST00000613299 NUCB1Q02818 461 aa11.6□□□□□ -0.55
CRX-207ENST00000613299 G2E3Q7L622 706 aa11.6□□□□□ -0.55
CRX-207ENST00000613299 WDR17Q8IZU2 1322 aa11.6□□□□□ -0.55
CRX-207ENST00000613299 SOS2Q07890 1332 aaPredicted RBP11.6□□□□□ -0.55
CRX-207ENST00000613299 MFAP1P55081 439 aaKnown RBP11.6□□□□□ -0.55
CRX-207ENST00000613299 PIP4K2BP78356 416 aa11.6□□□□□ -0.55
CRX-207ENST00000613299 NFATC2IPQ8NCF5 419 aa11.6□□□□□ -0.55
CRX-207ENST00000613299 MEIS3Q99687 375 aa11.59□□□□□ -0.55
CRX-207ENST00000613299 CPDO75976 1380 aa11.59□□□□□ -0.55
CRX-207ENST00000613299 LARP1Q6PKG0 1096 aaKnown RBP11.59□□□□□ -0.55
CRX-207ENST00000613299 ZNF790Q6PG37 636 aa11.59□□□□□ -0.55
CRX-207ENST00000613299 CARD10Q9BWT7 1032 aa11.59□□□□□ -0.55
CRX-207ENST00000613299 TMOD3Q9NYL9 352 aa11.59□□□□□ -0.55
CRX-207ENST00000613299 GPATCH3Q96I76 525 aa11.58□□□□□ -0.56
CRX-207ENST00000613299 ZNF330Q9Y3S2 320 aaPredicted RBP11.58□□□□□ -0.56
CRX-207ENST00000613299 PI4KAP2A4QPH2 592 aa11.58□□□□□ -0.56
CRX-207ENST00000613299 MYL6BP14649 208 aa11.58□□□□□ -0.56
CRX-207ENST00000613299 AEBP2Q6ZN18 517 aaPredicted RBP11.58□□□□□ -0.56
CRX-207ENST00000613299 PI4KAP1Q8N8J0 262 aa11.58□□□□□ -0.56
CRX-207ENST00000613299 NUTM2BA6NNL0 878 aaPredicted RBP11.58□□□□□ -0.56
CRX-207ENST00000613299 NUTM2EB1AL46 878 aaPredicted RBP11.58□□□□□ -0.56
CRX-207ENST00000613299 HSP90AA1P07900 732 aaKnown RBP11.58□□□□□ -0.56
CRX-207ENST00000613299 NUTM2AQ8IVF1 878 aaPredicted RBP11.58□□□□□ -0.56
CRX-207ENST00000613299 LTN1O94822 1766 aa11.58□□□□□ -0.56
CRX-207ENST00000613299 SLC39A6Q13433 755 aa11.57□□□□□ -0.56
CRX-207ENST00000613299 BTG4Q9NY30 223 aa11.57□□□□□ -0.56
CRX-207ENST00000613299 CEMIPQ8WUJ3 1361 aa11.57□□□□□ -0.56
CRX-207ENST00000613299 EXOC5O00471 708 aa11.57□□□□□ -0.56
CRX-207ENST00000613299 ALDH1L1O75891 902 aa11.57□□□□□ -0.56
CRX-207ENST00000613299 KSR2Q6VAB6 950 aa11.57□□□□□ -0.56
CRX-207ENST00000613299 LRRCC1Q9C099 1032 aa11.57□□□□□ -0.56
CRX-207ENST00000613299 DCTPP1Q9H773 170 aa11.57□□□□□ -0.56
CRX-207ENST00000613299 CEP85Q6P2H3 762 aa11.57□□□□□ -0.56
CRX-207ENST00000613299 SYTL4Q96C24 671 aaPredicted RBP11.57□□□□□ -0.56
CRX-207ENST00000613299 DDX21Q9NR30 783 aaKnown RBP eCLIP11.57□□□□□ -0.56
CRX-207ENST00000613299 CDC45O75419 566 aa11.56□□□□□ -0.56
CRX-207ENST00000613299 GIGYF1O75420 1035 aaPredicted RBP11.56□□□□□ -0.56
CRX-207ENST00000613299 PHAXQ9H814 394 aaKnown RBP11.56□□□□□ -0.56
CRX-207ENST00000613299 MAP3K2Q9Y2U5 619 aa11.56□□□□□ -0.56
CRX-207ENST00000613299 SURF6O75683 361 aaKnown RBP11.56□□□□□ -0.56
CRX-207ENST00000613299 ADAMTS2O95450 1211 aa11.56□□□□□ -0.56
CRX-207ENST00000613299 LRRFIP2Q9Y608 721 aaKnown RBP11.56□□□□□ -0.56
CRX-207ENST00000613299 OVOS2A0A0G2JMS6 1433 aa11.56□□□□□ -0.56
CRX-207ENST00000613299 DLG5Q8TDM6 1919 aa11.56□□□□□ -0.56
CRX-207ENST00000613299 RGPD1P0DJD0 1748 aa11.55□□□□□ -0.56
CRX-207ENST00000613299 ERVV-2B6SEH9 535 aa11.55□□□□□ -0.56
CRX-207ENST00000613299 KCNQ3O43525 872 aa11.55□□□□□ -0.56
CRX-207ENST00000613299 TEX13AQ9BXU3 409 aaPredicted RBP11.55□□□□□ -0.56
CRX-207ENST00000613299 C8orf34Q49A92 452 aa11.55□□□□□ -0.56
CRX-207ENST00000613299 USP54Q70EL1 1684 aa11.55□□□□□ -0.56
CRX-207ENST00000613299 TRIM6-TRIM34B2RNG4 842 aa11.55□□□□□ -0.56
CRX-207ENST00000613299 RAB11FIP3O75154 756 aa11.55□□□□□ -0.56
CRX-207ENST00000613299 ANXA1P04083 346 aa11.55□□□□□ -0.56
CRX-207ENST00000613299 G3BP1Q13283 466 aaKnown RBP eCLIP11.55□□□□□ -0.56
CRX-207ENST00000613299 ERC1Q8IUD2 1116 aa11.55□□□□□ -0.56
CRX-207ENST00000613299 HSCBQ8IWL3 235 aa11.55□□□□□ -0.56
CRX-207ENST00000613299 PLEKHG2Q9H7P9 1386 aa11.55□□□□□ -0.56
CRX-207ENST00000613299 ATP8B2P98198 1209 aa11.54□□□□□ -0.56
CRX-207ENST00000613299 RBM42Q9BTD8 480 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms