RNA–Protein interactions for RNA: ENST00000612954.4

PCDH17-203, Transcript of protocadherin 17, humanhuman

TSL 5

Gene PCDH17, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-203ENST00000612954 ZNF827Q17R98 1081 aa17.13■□□□□ 0.33
PCDH17-203ENST00000612954 GAS2L2Q8NHY3 880 aa17.13■□□□□ 0.33
PCDH17-203ENST00000612954 PLEKHF1Q96S99 279 aa17.13■□□□□ 0.33
PCDH17-203ENST00000612954 PDGFDQ9GZP0 370 aaPredicted RBP17.13■□□□□ 0.33
PCDH17-203ENST00000612954 CCDC184Q52MB2 194 aa17.12■□□□□ 0.33
PCDH17-203ENST00000612954 GNAT3A8MTJ3 354 aa17.11■□□□□ 0.33
PCDH17-203ENST00000612954 ANP32CO43423 234 aa17.11■□□□□ 0.33
PCDH17-203ENST00000612954 IL17REQ8NFR9 667 aa17.11■□□□□ 0.33
PCDH17-203ENST00000612954 SLC15A2Q16348 729 aa17.1■□□□□ 0.33
PCDH17-203ENST00000612954 SMARCC1Q92922 1105 aaPredicted RBP17.1■□□□□ 0.33
PCDH17-203ENST00000612954 SLC52A2Q9HAB3 445 aa17.1■□□□□ 0.33
PCDH17-203ENST00000612954 C4BP0C0L5 1744 aa17.1■□□□□ 0.33
PCDH17-203ENST00000612954 QSER1Q2KHR3 1735 aa17.1■□□□□ 0.33
PCDH17-203ENST00000612954 LOC102724428A0A0B4J2F2 783 aa17.1■□□□□ 0.33
PCDH17-203ENST00000612954 SIK1P57059 783 aa17.1■□□□□ 0.33
PCDH17-203ENST00000612954 AKT1S1Q96B36 256 aa17.1■□□□□ 0.33
PCDH17-203ENST00000612954 STK32BQ9NY57 414 aa17.1■□□□□ 0.33
PCDH17-203ENST00000612954 ZNF831Q5JPB2 1677 aa17.09■□□□□ 0.33
PCDH17-203ENST00000612954 COL5A3P25940 1745 aaPredicted RBP17.09■□□□□ 0.33
PCDH17-203ENST00000612954 SLC4A9Q96Q91 983 aa17.09■□□□□ 0.33
PCDH17-203ENST00000612954 UBR2Q8IWV8 1755 aa17.09■□□□□ 0.33
PCDH17-203ENST00000612954 CEMIPQ8WUJ3 1361 aa17.08■□□□□ 0.33
PCDH17-203ENST00000612954 TJP1Q07157 1748 aa17.08■□□□□ 0.32
PCDH17-203ENST00000612954 ITPK1Q13572 414 aa17.07■□□□□ 0.32
PCDH17-203ENST00000612954 UBR3Q6ZT12 1888 aa17.07■□□□□ 0.32
PCDH17-203ENST00000612954 CCER2I3L3R5 266 aa17.07■□□□□ 0.32
PCDH17-203ENST00000612954 SLC39A6Q13433 755 aa17.07■□□□□ 0.32
PCDH17-203ENST00000612954 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
PCDH17-203ENST00000612954 MCM10Q7L590 875 aa17.07■□□□□ 0.32
PCDH17-203ENST00000612954 ADAMTS8Q9UP79 889 aa17.07■□□□□ 0.32
PCDH17-203ENST00000612954 LRP5O75197 1615 aa17.07■□□□□ 0.32
PCDH17-203ENST00000612954 KCPQ6ZWJ8 1503 aa17.06■□□□□ 0.32
PCDH17-203ENST00000612954 MYH14Q7Z406 1995 aaKnown RBP17.06■□□□□ 0.32
PCDH17-203ENST00000612954 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
PCDH17-203ENST00000612954 CCDC146Q8IYE0 955 aa17.06■□□□□ 0.32
PCDH17-203ENST00000612954 LINC00116Q8NCU8 138 aa17.06■□□□□ 0.32
PCDH17-203ENST00000612954 RBM42Q9BTD8 480 aaKnown RBP17.06■□□□□ 0.32
PCDH17-203ENST00000612954 CICQ96RK0 1608 aaPredicted RBP17.05■□□□□ 0.32
PCDH17-203ENST00000612954 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
PCDH17-203ENST00000612954 WDR43Q15061 677 aaKnown RBP eCLIP17.05■□□□□ 0.32
PCDH17-203ENST00000612954 MAPK8IP3Q9UPT6 1336 aa17.05■□□□□ 0.32
PCDH17-203ENST00000612954 AMIGO3Q86WK7 504 aa17.04■□□□□ 0.32
PCDH17-203ENST00000612954 PNPLA7Q6ZV29 1317 aa17.04■□□□□ 0.32
PCDH17-203ENST00000612954 TEFQ10587 303 aa17.03■□□□□ 0.32
PCDH17-203ENST00000612954 NFE2L2Q16236 605 aa17.03■□□□□ 0.32
PCDH17-203ENST00000612954 SMIM5Q71RC9 77 aa17.03■□□□□ 0.32
PCDH17-203ENST00000612954 TFCP2L1Q9NZI6 479 aa17.03■□□□□ 0.32
PCDH17-203ENST00000612954 NEFMP07197 916 aa17.03■□□□□ 0.32
PCDH17-203ENST00000612954 ZBTB7AO95365 584 aa17.02■□□□□ 0.31
PCDH17-203ENST00000612954 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.31
PCDH17-203ENST00000612954 THUMPD2Q9BTF0 503 aaKnown RBP17.02■□□□□ 0.31
PCDH17-203ENST00000612954 PNNQ9H307 717 aaKnown RBP17.02■□□□□ 0.31
PCDH17-203ENST00000612954 RRP7AQ9Y3A4 280 aaKnown RBP17.01■□□□□ 0.31
PCDH17-203ENST00000612954 KCNQ3O43525 872 aa16.99■□□□□ 0.31
PCDH17-203ENST00000612954 HTATSF1O43719 755 aaKnown RBP16.99■□□□□ 0.31
PCDH17-203ENST00000612954 TMPOP42166 694 aaKnown RBP16.99■□□□□ 0.31
PCDH17-203ENST00000612954 KDM3BQ7LBC6 1761 aa16.99■□□□□ 0.31
PCDH17-203ENST00000612954 ZNF790Q6PG37 636 aa16.99■□□□□ 0.31
PCDH17-203ENST00000612954 COL23A1Q86Y22 540 aaPredicted RBP16.99■□□□□ 0.31
PCDH17-203ENST00000612954 RUNDC1Q96C34 613 aa16.99■□□□□ 0.31
PCDH17-203ENST00000612954 AK7Q96M32 723 aa16.99■□□□□ 0.31
PCDH17-203ENST00000612954 MRS2Q9HD23 443 aa16.99■□□□□ 0.31
PCDH17-203ENST00000612954 COL24A1Q17RW2 1714 aa16.98■□□□□ 0.31
PCDH17-203ENST00000612954 RIPK4P57078 832 aa16.98■□□□□ 0.31
PCDH17-203ENST00000612954 ZNF496Q96IT1 587 aaPredicted RBP16.98■□□□□ 0.31
PCDH17-203ENST00000612954 C4AP0C0L4 1744 aa16.97■□□□□ 0.31
PCDH17-203ENST00000612954 BTBD11A6QL63 1104 aa16.97■□□□□ 0.31
PCDH17-203ENST00000612954 GNPATO15228 680 aa16.97■□□□□ 0.31
PCDH17-203ENST00000612954 PHF14O94880 888 aa16.97■□□□□ 0.31
PCDH17-203ENST00000612954 NEUROD2Q15784 382 aa16.97■□□□□ 0.31
PCDH17-203ENST00000612954 DNAJC10Q8IXB1 793 aa16.97■□□□□ 0.31
PCDH17-203ENST00000612954 PNISRQ8TF01 805 aaKnown RBP16.97■□□□□ 0.31
PCDH17-203ENST00000612954 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
PCDH17-203ENST00000612954 TTC5Q8N0Z6 440 aa16.96■□□□□ 0.31
PCDH17-203ENST00000612954 MIS18AQ9NYP9 233 aa16.96■□□□□ 0.31
PCDH17-203ENST00000612954 CNTNAP4Q9C0A0 1308 aa16.96■□□□□ 0.31
PCDH17-203ENST00000612954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.96■□□□□ 0.3
PCDH17-203ENST00000612954 SPON1Q9HCB6 807 aa16.96■□□□□ 0.3
PCDH17-203ENST00000612954 GOLGB1Q14789 3259 aaKnown RBP16.95■□□□□ 0.3
PCDH17-203ENST00000612954 CENPBP07199 599 aaPredicted RBP16.95■□□□□ 0.3
PCDH17-203ENST00000612954 PTGER2P43116 358 aa16.95■□□□□ 0.3
PCDH17-203ENST00000612954 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
PCDH17-203ENST00000612954 MTFR1LQ9H019 292 aa16.95■□□□□ 0.3
PCDH17-203ENST00000612954 SENP3-EIF4A1A0A087X0R7 540 aa16.94■□□□□ 0.3
PCDH17-203ENST00000612954 MSH5O43196 834 aa16.94■□□□□ 0.3
PCDH17-203ENST00000612954 TRIM35Q9UPQ4 493 aa16.94■□□□□ 0.3
PCDH17-203ENST00000612954 HEG1Q9ULI3 1381 aa16.94■□□□□ 0.3
PCDH17-203ENST00000612954 APAF1O14727 1248 aa16.93■□□□□ 0.3
PCDH17-203ENST00000612954 TAF7Q15545 349 aaPredicted RBP16.93■□□□□ 0.3
PCDH17-203ENST00000612954 SGIP1Q9BQI5 828 aa16.93■□□□□ 0.3
PCDH17-203ENST00000612954 PRAMEF22A3QJZ6 481 aa16.92■□□□□ 0.3
PCDH17-203ENST00000612954 CYP19A1P11511 503 aaPredicted RBP16.92■□□□□ 0.3
PCDH17-203ENST00000612954 SSFA2P28290 1259 aa16.92■□□□□ 0.3
PCDH17-203ENST00000612954 RC3H1Q5TC82 1133 aaKnown RBP16.92■□□□□ 0.3
PCDH17-203ENST00000612954 INTS5Q6P9B9 1019 aaKnown RBP16.92■□□□□ 0.3
PCDH17-203ENST00000612954 VSIG10Q8N0Z9 540 aa16.92■□□□□ 0.3
PCDH17-203ENST00000612954 UTRNP46939 3433 aa16.92■□□□□ 0.3
PCDH17-203ENST00000612954 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
PCDH17-203ENST00000612954 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
PCDH17-203ENST00000612954 FMNL2Q96PY5 1086 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms