RNA–Protein interactions for RNA: ENST00000612761.1

CFDP1-211, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 395 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-211ENST00000612761 ITGA6P23229 1130 aa8.82□□□□□ -1
CFDP1-211ENST00000612761 ATP1A2P50993 1020 aa8.82□□□□□ -1
CFDP1-211ENST00000612761 GNASQ5JWF2 1037 aa8.82□□□□□ -1
CFDP1-211ENST00000612761 LCE2CQ5TA81 110 aa8.82□□□□□ -1
CFDP1-211ENST00000612761 TMEM214Q6NUQ4 689 aaKnown RBP8.82□□□□□ -1
CFDP1-211ENST00000612761 PPP1R12CQ9BZL4 782 aa8.82□□□□□ -1
CFDP1-211ENST00000612761 TMEM229AB2RXF0 380 aa8.81□□□□□ -1
CFDP1-211ENST00000612761 MKRN1Q9UHC7 482 aaKnown RBP8.81□□□□□ -1
CFDP1-211ENST00000612761 DYRK1BQ9Y463 629 aa8.81□□□□□ -1
CFDP1-211ENST00000612761 MAFBQ9Y5Q3 323 aaPredicted RBP8.81□□□□□ -1
CFDP1-211ENST00000612761 BACH1O14867 736 aa8.8□□□□□ -1
CFDP1-211ENST00000612761 SMTNP53814 917 aa8.8□□□□□ -1
CFDP1-211ENST00000612761 RHBDD1Q8TEB9 315 aa8.8□□□□□ -1
CFDP1-211ENST00000612761 NANOS1Q8WY41 292 aaKnown RBP8.8□□□□□ -1
CFDP1-211ENST00000612761 TIMMDC1Q9NPL8 285 aa8.8□□□□□ -1
CFDP1-211ENST00000612761 SERTAD1Q9UHV2 236 aa8.8□□□□□ -1
CFDP1-211ENST00000612761 WIPF1O43516 503 aa8.79□□□□□ -1
CFDP1-211ENST00000612761 GMPRP36959 345 aa8.79□□□□□ -1
CFDP1-211ENST00000612761 PPARGC1BQ86YN6 1023 aaKnown RBP8.79□□□□□ -1
CFDP1-211ENST00000612761 SLC4A9Q96Q91 983 aa8.79□□□□□ -1
CFDP1-211ENST00000612761 DNAAF2Q9NVR5 837 aaKnown RBP8.79□□□□□ -1
CFDP1-211ENST00000612761 CDC14CA4D256 554 aa8.78□□□□□ -1
CFDP1-211ENST00000612761 OGFOD1Q8N543 542 aa8.78□□□□□ -1
CFDP1-211ENST00000612761 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.78□□□□□ -1
CFDP1-211ENST00000612761 GAS2L1Q99501 681 aaPredicted RBP8.78□□□□□ -1
CFDP1-211ENST00000612761 A6NJY4 79 aa8.77□□□□□ -1.01
CFDP1-211ENST00000612761 ZBTB7BO15156 539 aaPredicted RBP8.77□□□□□ -1.01
CFDP1-211ENST00000612761 LMOD1P29536 600 aaPredicted RBP8.77□□□□□ -1.01
CFDP1-211ENST00000612761 PHKA2P46019 1235 aa8.77□□□□□ -1.01
CFDP1-211ENST00000612761 CLDN10P78369 228 aa8.77□□□□□ -1.01
CFDP1-211ENST00000612761 C4orf17Q53FE4 359 aa8.77□□□□□ -1.01
CFDP1-211ENST00000612761 CCDC102BQ68D86 513 aa8.77□□□□□ -1.01
CFDP1-211ENST00000612761 RIPOR1Q6ZS17 1223 aa8.77□□□□□ -1.01
CFDP1-211ENST00000612761 SV2AQ7L0J3 742 aa8.77□□□□□ -1.01
CFDP1-211ENST00000612761 VWA5B2Q8N398 1253 aa8.77□□□□□ -1.01
CFDP1-211ENST00000612761 LARGE2Q8N3Y3 721 aa8.77□□□□□ -1.01
CFDP1-211ENST00000612761 TPCN2Q8NHX9 752 aa8.77□□□□□ -1.01
CFDP1-211ENST00000612761 ZNF358Q9NW07 568 aa8.77□□□□□ -1.01
CFDP1-211ENST00000612761 RBM19Q9Y4C8 960 aaKnown RBP8.77□□□□□ -1.01
CFDP1-211ENST00000612761 MTFR1Q15390 333 aa8.76□□□□□ -1.01
CFDP1-211ENST00000612761 GMCL1Q96IK5 515 aa8.76□□□□□ -1.01
CFDP1-211ENST00000612761 KIAA1024Q9UPX6 916 aa8.76□□□□□ -1.01
CFDP1-211ENST00000612761 A0A1B0GTH6 734 aa8.75□□□□□ -1.01
CFDP1-211ENST00000612761 H7C1W4 665 aa8.75□□□□□ -1.01
CFDP1-211ENST00000612761 CDK2AP1O14519 115 aa8.75□□□□□ -1.01
CFDP1-211ENST00000612761 F11P03951 625 aa8.75□□□□□ -1.01
CFDP1-211ENST00000612761 RASA1P20936 1047 aa8.75□□□□□ -1.01
CFDP1-211ENST00000612761 ZNF594Q96JF6 807 aaPredicted RBP8.75□□□□□ -1.01
CFDP1-211ENST00000612761 NIFKQ9BYG3 293 aaKnown RBP8.75□□□□□ -1.01
CFDP1-211ENST00000612761 LARP1Q6PKG0 1096 aaKnown RBP8.74□□□□□ -1.01
CFDP1-211ENST00000612761 C14orf37Q86TY3 774 aa8.74□□□□□ -1.01
CFDP1-211ENST00000612761 TRIM22Q8IYM9 498 aa8.74□□□□□ -1.01
CFDP1-211ENST00000612761 GPR161Q8N6U8 529 aaKnown RBP8.74□□□□□ -1.01
CFDP1-211ENST00000612761 VRTNQ9H8Y1 702 aa8.74□□□□□ -1.01
CFDP1-211ENST00000612761 CUEDC1Q9NWM3 386 aaPredicted RBP8.74□□□□□ -1.01
CFDP1-211ENST00000612761 PLA2G4AP47712 749 aa8.73□□□□□ -1.01
CFDP1-211ENST00000612761 INSM1Q01101 510 aaPredicted RBP8.73□□□□□ -1.01
CFDP1-211ENST00000612761 CFAP70Q5T0N1 1121 aa8.73□□□□□ -1.01
CFDP1-211ENST00000612761 KANK4Q5T7N3 995 aaPredicted RBP8.73□□□□□ -1.01
CFDP1-211ENST00000612761 SIX5Q8N196 739 aa8.73□□□□□ -1.01
CFDP1-211ENST00000612761 ZNF837Q96EG3 531 aaPredicted RBP8.73□□□□□ -1.01
CFDP1-211ENST00000612761 SCHIP1Q9P0W5 487 aaPredicted RBP8.73□□□□□ -1.01
CFDP1-211ENST00000612761 IQSEC3Q9UPP2 1182 aaPredicted RBP8.73□□□□□ -1.01
CFDP1-211ENST00000612761 DBN1Q16643 649 aa8.72□□□□□ -1.01
CFDP1-211ENST00000612761 FOXR1Q6PIV2 292 aa8.72□□□□□ -1.01
CFDP1-211ENST00000612761 TNS4Q8IZW8 715 aa8.72□□□□□ -1.01
CFDP1-211ENST00000612761 GPAMQ9HCL2 828 aa8.72□□□□□ -1.01
CFDP1-211ENST00000612761 M0R2N6 131 aa8.71□□□□□ -1.02
CFDP1-211ENST00000612761 CSB-PGBD3P0DP91 1061 aa8.71□□□□□ -1.02
CFDP1-211ENST00000612761 MSX1P28360 303 aa8.71□□□□□ -1.02
CFDP1-211ENST00000612761 PGBD3Q8N328 593 aa8.71□□□□□ -1.02
CFDP1-211ENST00000612761 CABP1Q9NZU7 370 aa8.71□□□□□ -1.02
CFDP1-211ENST00000612761 EPHA4P54764 986 aa8.7□□□□□ -1.02
CFDP1-211ENST00000612761 CRTC2Q53ET0 693 aaPredicted RBP8.7□□□□□ -1.02
CFDP1-211ENST00000612761 C1orf216Q8TAB5 229 aa8.7□□□□□ -1.02
CFDP1-211ENST00000612761 AIDAQ96BJ3 306 aa8.7□□□□□ -1.02
CFDP1-211ENST00000612761 COL25A1Q9BXS0 654 aaPredicted RBP8.7□□□□□ -1.02
CFDP1-211ENST00000612761 NUCKS1Q9H1E3 243 aaKnown RBP8.7□□□□□ -1.02
CFDP1-211ENST00000612761 USP3Q9Y6I4 520 aa8.7□□□□□ -1.02
CFDP1-211ENST00000612761 FAM196BA6NMK8 535 aa8.69□□□□□ -1.02
CFDP1-211ENST00000612761 SFI1A8K8P3 1242 aa8.69□□□□□ -1.02
CFDP1-211ENST00000612761 DKK1O94907 266 aa8.69□□□□□ -1.02
CFDP1-211ENST00000612761 RFX1P22670 979 aa8.69□□□□□ -1.02
CFDP1-211ENST00000612761 SEC13P55735 322 aa8.69□□□□□ -1.02
CFDP1-211ENST00000612761 FOXK2Q01167 660 aa8.69□□□□□ -1.02
CFDP1-211ENST00000612761 PTK7Q13308 1070 aa8.69□□□□□ -1.02
CFDP1-211ENST00000612761 NBPF1Q3BBV0 1214 aa8.69□□□□□ -1.02
CFDP1-211ENST00000612761 ZNF295-AS1Q8N0V1 137 aa8.69□□□□□ -1.02
CFDP1-211ENST00000612761 CCDC97Q96F63 343 aaPredicted RBP8.69□□□□□ -1.02
CFDP1-211ENST00000612761 USP17L15C9J2P7 530 aa8.68□□□□□ -1.02
CFDP1-211ENST00000612761 USP17L10C9JJH3 530 aa8.68□□□□□ -1.02
CFDP1-211ENST00000612761 USP17L13C9JLJ4 530 aa8.68□□□□□ -1.02
CFDP1-211ENST00000612761 USP17L12C9JPN9 530 aa8.68□□□□□ -1.02
CFDP1-211ENST00000612761 USP17L11C9JVI0 530 aa8.68□□□□□ -1.02
CFDP1-211ENST00000612761 USP17L21D6R901 530 aa8.68□□□□□ -1.02
CFDP1-211ENST00000612761 USP17L18D6R9N7 530 aa8.68□□□□□ -1.02
CFDP1-211ENST00000612761 USP17L22D6RA61 530 aa8.68□□□□□ -1.02
CFDP1-211ENST00000612761 USP17L17D6RBQ6 530 aa8.68□□□□□ -1.02
CFDP1-211ENST00000612761 USP17L19D6RCP7 530 aa8.68□□□□□ -1.02
CFDP1-211ENST00000612761 USP17L20D6RJB6 530 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 252.6 ms