RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 PRPF40BQ6NWY9 871 aaKnown RBP12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 AMOTL1Q8IY63 956 aa12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 PCMTD1Q96MG8 357 aaPredicted RBP12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 ANAPC15P60006 121 aa12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 FLIIQ13045 1269 aa12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 FMNL2Q96PY5 1086 aa12.9□□□□□ -0.34
CDC42EP3-206ENST00000611976 EIF4G3O43432 1585 aaKnown RBP12.9□□□□□ -0.35
CDC42EP3-206ENST00000611976 ARHGEF5Q12774 1597 aa12.9□□□□□ -0.35
CDC42EP3-206ENST00000611976 CBFA2T2O43439 604 aa12.89□□□□□ -0.35
CDC42EP3-206ENST00000611976 DENND4BO75064 1496 aaPredicted RBP12.89□□□□□ -0.35
CDC42EP3-206ENST00000611976 RBM25P49756 843 aaKnown RBP12.89□□□□□ -0.35
CDC42EP3-206ENST00000611976 THEMISQ8N1K5 641 aaPredicted RBP12.89□□□□□ -0.35
CDC42EP3-206ENST00000611976 ESCO1Q5FWF5 840 aa12.89□□□□□ -0.35
CDC42EP3-206ENST00000611976 KIF2AO00139 706 aaPredicted RBP12.89□□□□□ -0.35
CDC42EP3-206ENST00000611976 TATP17735 454 aaPredicted RBP12.89□□□□□ -0.35
CDC42EP3-206ENST00000611976 HS1BP3Q53T59 392 aa12.89□□□□□ -0.35
CDC42EP3-206ENST00000611976 TMX3Q96JJ7 454 aa12.89□□□□□ -0.35
CDC42EP3-206ENST00000611976 USP25Q9UHP3 1055 aa12.89□□□□□ -0.35
CDC42EP3-206ENST00000611976 DYNC1I1O14576 645 aa12.88□□□□□ -0.35
CDC42EP3-206ENST00000611976 CWC15Q9P013 229 aaKnown RBP12.88□□□□□ -0.35
CDC42EP3-206ENST00000611976 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.88□□□□□ -0.35
CDC42EP3-206ENST00000611976 DACH1Q9UI36 760 aa12.88□□□□□ -0.35
CDC42EP3-206ENST00000611976 STX6O43752 255 aa12.88□□□□□ -0.35
CDC42EP3-206ENST00000611976 SERPINC1P01008 464 aa12.88□□□□□ -0.35
CDC42EP3-206ENST00000611976 TTC39AQ5SRH9 613 aa12.88□□□□□ -0.35
CDC42EP3-206ENST00000611976 ERCC4Q92889 916 aaPredicted RBP12.88□□□□□ -0.35
CDC42EP3-206ENST00000611976 UBE2HP62256 183 aa12.88□□□□□ -0.35
CDC42EP3-206ENST00000611976 FILIP1LQ4L180 1135 aa12.88□□□□□ -0.35
CDC42EP3-206ENST00000611976 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
CDC42EP3-206ENST00000611976 CTNNA3Q9UI47 895 aa12.88□□□□□ -0.35
CDC42EP3-206ENST00000611976 ZNF518AQ6AHZ1 1483 aa12.87□□□□□ -0.35
CDC42EP3-206ENST00000611976 NOM1Q5C9Z4 860 aaKnown RBP12.87□□□□□ -0.35
CDC42EP3-206ENST00000611976 UBE2Q2Q8WVN8 375 aa12.87□□□□□ -0.35
CDC42EP3-206ENST00000611976 CLSTN1O94985 981 aa12.87□□□□□ -0.35
CDC42EP3-206ENST00000611976 SMARCE1Q969G3 411 aa12.87□□□□□ -0.35
CDC42EP3-206ENST00000611976 BCL11BQ9C0K0 894 aaPredicted RBP12.87□□□□□ -0.35
CDC42EP3-206ENST00000611976 DCTPP1Q9H773 170 aa12.87□□□□□ -0.35
CDC42EP3-206ENST00000611976 ABCC2Q92887 1545 aa12.87□□□□□ -0.35
CDC42EP3-206ENST00000611976 FAM83GA6ND36 823 aa12.87□□□□□ -0.35
CDC42EP3-206ENST00000611976 DNAAF4Q8WXU2 420 aa12.87□□□□□ -0.35
CDC42EP3-206ENST00000611976 DDX19AQ9NUU7 478 aaKnown RBP12.87□□□□□ -0.35
CDC42EP3-206ENST00000611976 PIK3R4Q99570 1358 aa12.87□□□□□ -0.35
CDC42EP3-206ENST00000611976 SMTNL1A8MU46 457 aa12.86□□□□□ -0.35
CDC42EP3-206ENST00000611976 PIP4K2AP48426 406 aaPredicted RBP12.86□□□□□ -0.35
CDC42EP3-206ENST00000611976 PRIMPOLQ96LW4 560 aa12.86□□□□□ -0.35
CDC42EP3-206ENST00000611976 NOL10Q9BSC4 688 aaKnown RBP12.86□□□□□ -0.35
CDC42EP3-206ENST00000611976 KDM5AP29375 1690 aaKnown RBP12.86□□□□□ -0.35
CDC42EP3-206ENST00000611976 CDKL5O76039 1030 aa12.86□□□□□ -0.35
CDC42EP3-206ENST00000611976 PDE1AP54750 535 aa12.86□□□□□ -0.35
CDC42EP3-206ENST00000611976 CAMK4Q16566 473 aa12.86□□□□□ -0.35
CDC42EP3-206ENST00000611976 FERMT3Q86UX7 667 aa12.86□□□□□ -0.35
CDC42EP3-206ENST00000611976 VPS37DQ86XT2 251 aa12.86□□□□□ -0.35
CDC42EP3-206ENST00000611976 AK7Q96M32 723 aa12.86□□□□□ -0.35
CDC42EP3-206ENST00000611976 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
CDC42EP3-206ENST00000611976 VAMP4O75379 141 aa12.86□□□□□ -0.35
CDC42EP3-206ENST00000611976 CTAGE5O15320 804 aa12.85□□□□□ -0.35
CDC42EP3-206ENST00000611976 ADCY5O95622 1261 aa12.85□□□□□ -0.35
CDC42EP3-206ENST00000611976 ESYT1Q9BSJ8 1104 aa12.85□□□□□ -0.35
CDC42EP3-206ENST00000611976 EVI5LQ96CN4 794 aa12.85□□□□□ -0.35
CDC42EP3-206ENST00000611976 ATF3P18847 181 aa12.85□□□□□ -0.35
CDC42EP3-206ENST00000611976 ZSCAN25Q6NSZ9 544 aa12.85□□□□□ -0.35
CDC42EP3-206ENST00000611976 TMX4Q9H1E5 349 aaPredicted RBP12.85□□□□□ -0.35
CDC42EP3-206ENST00000611976 KCNH5Q8NCM2 988 aa12.85□□□□□ -0.35
CDC42EP3-206ENST00000611976 MEIS3Q99687 375 aa12.85□□□□□ -0.35
CDC42EP3-206ENST00000611976 ANO10Q9NW15 660 aa12.85□□□□□ -0.35
CDC42EP3-206ENST00000611976 NEMFO60524 1076 aa12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 GJB2P29033 226 aa12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 FILIP1Q7Z7B0 1213 aa12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 SLC26A8Q96RN1 970 aa12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 ECHDC1Q9NTX5 307 aa12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 WDR7Q9Y4E6 1490 aa12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 A0A1W2PP64 1363 aa12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 HMGB1P09429 215 aaKnown RBP12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 C8orf58Q8NAV2 365 aa12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 GDPD2Q9HCC8 539 aa12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 KIF6Q6ZMV9 814 aa12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 ZKSCAN5Q9Y2L8 839 aa12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 MYL6BP14649 208 aa12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 RUFY1Q96T51 708 aa12.84□□□□□ -0.35
CDC42EP3-206ENST00000611976 CAVIN2O95810 425 aa12.83□□□□□ -0.35
CDC42EP3-206ENST00000611976 LARP1Q6PKG0 1096 aaKnown RBP12.83□□□□□ -0.35
CDC42EP3-206ENST00000611976 TRIM22Q8IYM9 498 aa12.83□□□□□ -0.36
CDC42EP3-206ENST00000611976 MBD5Q9P267 1494 aa12.83□□□□□ -0.36
CDC42EP3-206ENST00000611976 PTPN14Q15678 1187 aa12.83□□□□□ -0.36
CDC42EP3-206ENST00000611976 AMOTQ4VCS5 1084 aa12.83□□□□□ -0.36
CDC42EP3-206ENST00000611976 PLEKHM2Q8IWE5 1019 aa12.83□□□□□ -0.36
CDC42EP3-206ENST00000611976 POLKQ9UBT6 870 aa12.83□□□□□ -0.36
CDC42EP3-206ENST00000611976 ABCC10Q5T3U5 1492 aa12.83□□□□□ -0.36
CDC42EP3-206ENST00000611976 SYNMO15061 1565 aa12.83□□□□□ -0.36
CDC42EP3-206ENST00000611976 FBXO31Q5XUX0 539 aaPredicted RBP12.82□□□□□ -0.36
CDC42EP3-206ENST00000611976 DDX11Q96FC9 970 aa12.82□□□□□ -0.36
CDC42EP3-206ENST00000611976 DBF4Q9UBU7 674 aaPredicted RBP12.82□□□□□ -0.36
CDC42EP3-206ENST00000611976 CLIP2Q9UDT6 1046 aa12.82□□□□□ -0.36
CDC42EP3-206ENST00000611976 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
CDC42EP3-206ENST00000611976 ZBTB7BO15156 539 aaPredicted RBP12.82□□□□□ -0.36
CDC42EP3-206ENST00000611976 ABCC1P33527 1531 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms