RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 MCM4P33991 863 aa13.25□□□□□ -0.29
PCDHGC3-202ENST00000611950 NFE2L2Q16236 605 aa13.24□□□□□ -0.29
PCDHGC3-202ENST00000611950 KRT24Q2M2I5 525 aa13.24□□□□□ -0.29
PCDHGC3-202ENST00000611950 NUDT16Q96DE0 195 aaKnown RBP13.24□□□□□ -0.29
PCDHGC3-202ENST00000611950 KIF16BQ96L93 1317 aa13.24□□□□□ -0.29
PCDHGC3-202ENST00000611950 SMC5Q8IY18 1101 aa13.24□□□□□ -0.29
PCDHGC3-202ENST00000611950 NGLY1Q96IV0 654 aa13.24□□□□□ -0.29
PCDHGC3-202ENST00000611950 ARID3AQ99856 593 aa13.24□□□□□ -0.29
PCDHGC3-202ENST00000611950 CDK12Q9NYV4 1490 aaPredicted RBP13.24□□□□□ -0.29
PCDHGC3-202ENST00000611950 IPO8O15397 1037 aaKnown RBP13.23□□□□□ -0.29
PCDHGC3-202ENST00000611950 CHD1LQ86WJ1 897 aa13.23□□□□□ -0.29
PCDHGC3-202ENST00000611950 CD2BP2O95400 341 aaKnown RBP13.23□□□□□ -0.29
PCDHGC3-202ENST00000611950 RBM6P78332 1123 aaKnown RBP13.23□□□□□ -0.29
PCDHGC3-202ENST00000611950 ALDH1L2Q3SY69 923 aa13.23□□□□□ -0.29
PCDHGC3-202ENST00000611950 ADGRL3Q9HAR2 1447 aa13.23□□□□□ -0.29
PCDHGC3-202ENST00000611950 NALCNQ8IZF0 1738 aa13.22□□□□□ -0.29
PCDHGC3-202ENST00000611950 RGS12O14924 1447 aa13.22□□□□□ -0.29
PCDHGC3-202ENST00000611950 PRR36Q9H6K5 1346 aa13.22□□□□□ -0.29
PCDHGC3-202ENST00000611950 APPP05067 770 aa13.22□□□□□ -0.29
PCDHGC3-202ENST00000611950 TPM2P07951 284 aa13.22□□□□□ -0.29
PCDHGC3-202ENST00000611950 HSP90AB1P08238 724 aaKnown RBP13.22□□□□□ -0.29
PCDHGC3-202ENST00000611950 C8orf58Q8NAV2 365 aa13.21□□□□□ -0.29
PCDHGC3-202ENST00000611950 ANP32BQ92688 251 aaKnown RBP13.21□□□□□ -0.29
PCDHGC3-202ENST00000611950 MBIPQ9NS73 344 aa13.21□□□□□ -0.29
PCDHGC3-202ENST00000611950 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
PCDHGC3-202ENST00000611950 TECPR2O15040 1411 aa13.21□□□□□ -0.29
PCDHGC3-202ENST00000611950 AATKQ6ZMQ8 1374 aa13.21□□□□□ -0.29
PCDHGC3-202ENST00000611950 TRAK2O60296 914 aa13.21□□□□□ -0.29
PCDHGC3-202ENST00000611950 NUCB1Q02818 461 aa13.21□□□□□ -0.29
PCDHGC3-202ENST00000611950 MON2Q7Z3U7 1717 aa13.21□□□□□ -0.29
PCDHGC3-202ENST00000611950 VAMP4O75379 141 aa13.21□□□□□ -0.3
PCDHGC3-202ENST00000611950 PHF14O94880 888 aa13.21□□□□□ -0.3
PCDHGC3-202ENST00000611950 XRCC6P12956 609 aaKnown RBP eCLIP13.21□□□□□ -0.3
PCDHGC3-202ENST00000611950 PTMSP20962 102 aa13.21□□□□□ -0.3
PCDHGC3-202ENST00000611950 DMTNQ08495 405 aa13.21□□□□□ -0.3
PCDHGC3-202ENST00000611950 CHMP5Q9NZZ3 219 aa13.21□□□□□ -0.3
PCDHGC3-202ENST00000611950 KNDC1Q76NI1 1749 aa13.2□□□□□ -0.3
PCDHGC3-202ENST00000611950 AXDND1Q5T1B0 1012 aaPredicted RBP13.2□□□□□ -0.3
PCDHGC3-202ENST00000611950 COG3Q96JB2 828 aa13.2□□□□□ -0.3
PCDHGC3-202ENST00000611950 PSMD1Q99460 953 aa13.2□□□□□ -0.3
PCDHGC3-202ENST00000611950 GOLGA6L3A6NEY3 463 aa13.2□□□□□ -0.3
PCDHGC3-202ENST00000611950 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
PCDHGC3-202ENST00000611950 ZNF853P0CG23 659 aa13.19□□□□□ -0.3
PCDHGC3-202ENST00000611950 TWISTNBQ3B726 338 aaPredicted RBP13.19□□□□□ -0.3
PCDHGC3-202ENST00000611950 AEBP1Q8IUX7 1158 aa13.19□□□□□ -0.3
PCDHGC3-202ENST00000611950 SIRT2Q8IXJ6 389 aa13.19□□□□□ -0.3
PCDHGC3-202ENST00000611950 ZBTB7BO15156 539 aaPredicted RBP13.19□□□□□ -0.3
PCDHGC3-202ENST00000611950 BRPF1P55201 1214 aaPredicted RBP13.19□□□□□ -0.3
PCDHGC3-202ENST00000611950 C16orf71Q8IYS4 520 aaPredicted RBP13.19□□□□□ -0.3
PCDHGC3-202ENST00000611950 MRPL50Q8N5N7 158 aaKnown RBP13.19□□□□□ -0.3
PCDHGC3-202ENST00000611950 ORAI2Q96SN7 254 aa13.19□□□□□ -0.3
PCDHGC3-202ENST00000611950 PRDM16Q9HAZ2 1276 aa13.19□□□□□ -0.3
PCDHGC3-202ENST00000611950 IFT57Q9NWB7 429 aa13.18□□□□□ -0.3
PCDHGC3-202ENST00000611950 C1orf167Q5SNV9 1468 aa13.18□□□□□ -0.3
PCDHGC3-202ENST00000611950 SIRT1Q96EB6 747 aa13.18□□□□□ -0.3
PCDHGC3-202ENST00000611950 AKAP12Q02952 1782 aa13.18□□□□□ -0.3
PCDHGC3-202ENST00000611950 DLG5Q8TDM6 1919 aa13.18□□□□□ -0.3
PCDHGC3-202ENST00000611950 GNAI1P63096 354 aa13.17□□□□□ -0.3
PCDHGC3-202ENST00000611950 TBC1D9Q6ZT07 1266 aa13.17□□□□□ -0.3
PCDHGC3-202ENST00000611950 ZNF428Q96B54 188 aa13.17□□□□□ -0.3
PCDHGC3-202ENST00000611950 MIS18AQ9NYP9 233 aa13.17□□□□□ -0.3
PCDHGC3-202ENST00000611950 USP21Q9UK80 565 aa13.17□□□□□ -0.3
PCDHGC3-202ENST00000611950 EP400Q96L91 3159 aa13.17□□□□□ -0.3
PCDHGC3-202ENST00000611950 OTUD7AQ8TE49 926 aaPredicted RBP13.17□□□□□ -0.3
PCDHGC3-202ENST00000611950 PTCH1Q13635 1447 aa13.16□□□□□ -0.3
PCDHGC3-202ENST00000611950 ITSN1Q15811 1721 aa13.16□□□□□ -0.3
PCDHGC3-202ENST00000611950 SMARCA5O60264 1052 aaPredicted RBP13.16□□□□□ -0.3
PCDHGC3-202ENST00000611950 MCM10Q7L590 875 aa13.16□□□□□ -0.3
PCDHGC3-202ENST00000611950 TNPO1Q92973 898 aaKnown RBP13.16□□□□□ -0.3
PCDHGC3-202ENST00000611950 L1TD1Q5T7N2 865 aaKnown RBP13.15□□□□□ -0.3
PCDHGC3-202ENST00000611950 DNTTIP2Q5QJE6 756 aaKnown RBP13.15□□□□□ -0.3
PCDHGC3-202ENST00000611950 MAP7D2Q96T17 732 aa13.15□□□□□ -0.3
PCDHGC3-202ENST00000611950 ARHGAP45Q92619 1136 aa13.14□□□□□ -0.31
PCDHGC3-202ENST00000611950 ZNF692Q9BU19 519 aaPredicted RBP13.14□□□□□ -0.31
PCDHGC3-202ENST00000611950 TRPC5Q9UL62 973 aaPredicted RBP13.14□□□□□ -0.31
PCDHGC3-202ENST00000611950 OS9Q13438 667 aaPredicted RBP13.14□□□□□ -0.31
PCDHGC3-202ENST00000611950 ABCC4O15439 1325 aa13.14□□□□□ -0.31
PCDHGC3-202ENST00000611950 EIF4A2Q14240 407 aaKnown RBP13.13□□□□□ -0.31
PCDHGC3-202ENST00000611950 SULT6B1Q6IMI4 303 aa13.13□□□□□ -0.31
PCDHGC3-202ENST00000611950 KIF2CQ99661 725 aa13.13□□□□□ -0.31
PCDHGC3-202ENST00000611950 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
PCDHGC3-202ENST00000611950 AK9Q5TCS8 1911 aa13.13□□□□□ -0.31
PCDHGC3-202ENST00000611950 NRKQ7Z2Y5 1582 aa13.13□□□□□ -0.31
PCDHGC3-202ENST00000611950 KIF20AO95235 890 aa13.13□□□□□ -0.31
PCDHGC3-202ENST00000611950 CERS3Q8IU89 383 aa13.13□□□□□ -0.31
PCDHGC3-202ENST00000611950 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
PCDHGC3-202ENST00000611950 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 SSFA2P28290 1259 aa13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 BMP2KLQ5H9B9 411 aa13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 GAS2L2Q8NHY3 880 aa13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 NECTIN2Q92692 538 aa13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 ACEP12821 1306 aa13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 XPCQ01831 940 aaPredicted RBP13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 ESCO1Q5FWF5 840 aa13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 SLC4A10Q6U841 1118 aa13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 OVOS2A0A0J9YW53 1432 aa13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 OVOS2Q6IE36 1432 aa13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 FOXD4L5Q5VV16 416 aaPredicted RBP13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms