RNA–Protein interactions for RNA: ENST00000611910.4

SYNRG-216, Transcript of synergin gamma, humanhuman

TSL 1 (best)

Gene SYNRG, Length 1,769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-216ENST00000611910 FAM43AQ8N2R8 423 aa12.56□□□□□ -0.4
SYNRG-216ENST00000611910 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
SYNRG-216ENST00000611910 KCNA6P17658 529 aa12.56□□□□□ -0.4
SYNRG-216ENST00000611910 NUTM2GQ5VZR2 741 aa12.56□□□□□ -0.4
SYNRG-216ENST00000611910 OTUD7AQ8TE49 926 aaPredicted RBP12.56□□□□□ -0.4
SYNRG-216ENST00000611910 FOXD4L1Q9NU39 408 aa12.56□□□□□ -0.4
SYNRG-216ENST00000611910 FAM208AQ9UK61 1670 aaKnown RBP12.55□□□□□ -0.4
SYNRG-216ENST00000611910 FSD2A1L4K1 749 aa12.55□□□□□ -0.4
SYNRG-216ENST00000611910 ERC2O15083 957 aa12.55□□□□□ -0.4
SYNRG-216ENST00000611910 CD2BP2O95400 341 aaKnown RBP12.55□□□□□ -0.4
SYNRG-216ENST00000611910 MRE11P49959 708 aa12.55□□□□□ -0.4
SYNRG-216ENST00000611910 LTV1Q96GA3 475 aaPredicted RBP12.55□□□□□ -0.4
SYNRG-216ENST00000611910 LRRCC1Q9C099 1032 aa12.55□□□□□ -0.4
SYNRG-216ENST00000611910 PDE1AP54750 535 aa12.54□□□□□ -0.4
SYNRG-216ENST00000611910 NUCB2P80303 420 aa12.54□□□□□ -0.4
SYNRG-216ENST00000611910 ATP8B2P98198 1209 aa12.54□□□□□ -0.4
SYNRG-216ENST00000611910 MARF1Q9Y4F3 1742 aaKnown RBP12.54□□□□□ -0.4
SYNRG-216ENST00000611910 PHF8Q9UPP1 1060 aa12.53□□□□□ -0.4
SYNRG-216ENST00000611910 PXDNLA1KZ92 1463 aa12.53□□□□□ -0.4
SYNRG-216ENST00000611910 MCCP23508 829 aa12.53□□□□□ -0.4
SYNRG-216ENST00000611910 IL17REQ8NFR9 667 aa12.53□□□□□ -0.4
SYNRG-216ENST00000611910 ARXQ96QS3 562 aa12.53□□□□□ -0.4
SYNRG-216ENST00000611910 SRCIN1Q9C0H9 1055 aa12.53□□□□□ -0.4
SYNRG-216ENST00000611910 CWC22Q9HCG8 908 aaKnown RBP12.53□□□□□ -0.4
SYNRG-216ENST00000611910 XRCC6P12956 609 aaKnown RBP eCLIP12.52□□□□□ -0.41
SYNRG-216ENST00000611910 NECTIN2Q92692 538 aa12.52□□□□□ -0.41
SYNRG-216ENST00000611910 EXOC6BQ9Y2D4 811 aa12.52□□□□□ -0.41
SYNRG-216ENST00000611910 LTN1O94822 1766 aa12.52□□□□□ -0.41
SYNRG-216ENST00000611910 N4BP2Q86UW6 1770 aaPredicted RBP12.52□□□□□ -0.41
SYNRG-216ENST00000611910 NWD1Q149M9 1564 aa12.51□□□□□ -0.41
SYNRG-216ENST00000611910 UBTFL1P0CB47 393 aaPredicted RBP12.51□□□□□ -0.41
SYNRG-216ENST00000611910 HDGFL1Q5TGJ6 251 aa12.51□□□□□ -0.41
SYNRG-216ENST00000611910 CLEC17AQ6ZS10 378 aa12.51□□□□□ -0.41
SYNRG-216ENST00000611910 KCNH5Q8NCM2 988 aa12.51□□□□□ -0.41
SYNRG-216ENST00000611910 IP6K1Q92551 441 aa12.51□□□□□ -0.41
SYNRG-216ENST00000611910 MX1P20591 662 aa12.51□□□□□ -0.41
SYNRG-216ENST00000611910 ANKLE2Q86XL3 938 aa12.51□□□□□ -0.41
SYNRG-216ENST00000611910 CHD2O14647 1828 aaKnown RBP12.5□□□□□ -0.41
SYNRG-216ENST00000611910 SSFA2P28290 1259 aa12.5□□□□□ -0.41
SYNRG-216ENST00000611910 PSME1Q06323 249 aa12.5□□□□□ -0.41
SYNRG-216ENST00000611910 GRPEL1Q9HAV7 217 aa12.5□□□□□ -0.41
SYNRG-216ENST00000611910 HOXB7P09629 217 aa12.49□□□□□ -0.41
SYNRG-216ENST00000611910 MCM2P49736 904 aa12.49□□□□□ -0.41
SYNRG-216ENST00000611910 LRRFIP2Q9Y608 721 aaKnown RBP12.49□□□□□ -0.41
SYNRG-216ENST00000611910 IBTKQ9P2D0 1353 aaPredicted RBP12.49□□□□□ -0.41
SYNRG-216ENST00000611910 PNMA6EA0A0J9YXQ4 647 aa12.48□□□□□ -0.41
SYNRG-216ENST00000611910 TRIM6-TRIM34B2RNG4 842 aa12.48□□□□□ -0.41
SYNRG-216ENST00000611910 RAB11FIP3O75154 756 aa12.48□□□□□ -0.41
SYNRG-216ENST00000611910 USHBP1Q8N6Y0 703 aa12.48□□□□□ -0.41
SYNRG-216ENST00000611910 AOX1Q06278 1338 aa12.48□□□□□ -0.41
SYNRG-216ENST00000611910 BAG4O95429 457 aaKnown RBP12.48□□□□□ -0.41
SYNRG-216ENST00000611910 RILPL2Q969X0 211 aa12.48□□□□□ -0.41
SYNRG-216ENST00000611910 ESYT1Q9BSJ8 1104 aa12.48□□□□□ -0.41
SYNRG-216ENST00000611910 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
SYNRG-216ENST00000611910 SALL3Q9BXA9 1300 aa12.48□□□□□ -0.41
SYNRG-216ENST00000611910 TEFQ10587 303 aa12.47□□□□□ -0.41
SYNRG-216ENST00000611910 PLEKHO1Q53GL0 409 aaPredicted RBP12.47□□□□□ -0.41
SYNRG-216ENST00000611910 USP44Q9H0E7 712 aa12.47□□□□□ -0.41
SYNRG-216ENST00000611910 ZBTB7CA1YPR0 619 aa12.46□□□□□ -0.41
SYNRG-216ENST00000611910 EIF2S2P20042 333 aaKnown RBP12.46□□□□□ -0.41
SYNRG-216ENST00000611910 ANAPC15P60006 121 aa12.46□□□□□ -0.41
SYNRG-216ENST00000611910 ESCO1Q5FWF5 840 aa12.46□□□□□ -0.41
SYNRG-216ENST00000611910 AKAP4Q5JQC9 854 aa12.46□□□□□ -0.41
SYNRG-216ENST00000611910 DDX49Q9Y6V7 483 aaKnown RBP12.46□□□□□ -0.41
SYNRG-216ENST00000611910 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.41
SYNRG-216ENST00000611910 AK9Q5TCS8 1911 aa12.46□□□□□ -0.41
SYNRG-216ENST00000611910 SETD1BQ9UPS6 1966 aaKnown RBP12.46□□□□□ -0.41
SYNRG-216ENST00000611910 EPB41L2O43491 1005 aaKnown RBP12.46□□□□□ -0.42
SYNRG-216ENST00000611910 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.42
SYNRG-216ENST00000611910 KLHL40Q2TBA0 621 aa12.46□□□□□ -0.42
SYNRG-216ENST00000611910 AMOTQ4VCS5 1084 aa12.46□□□□□ -0.42
SYNRG-216ENST00000611910 HSP90AB4PQ58FF6 505 aa12.46□□□□□ -0.42
SYNRG-216ENST00000611910 NBPF6Q5VWK0 638 aa12.46□□□□□ -0.42
SYNRG-216ENST00000611910 SSH3Q8TE77 659 aa12.46□□□□□ -0.42
SYNRG-216ENST00000611910 NBPF4Q96M43 638 aa12.46□□□□□ -0.42
SYNRG-216ENST00000611910 TUBGCP6Q96RT7 1819 aa12.46□□□□□ -0.42
SYNRG-216ENST00000611910 PHAXQ9H814 394 aaKnown RBP12.46□□□□□ -0.42
SYNRG-216ENST00000611910 ADGRL3Q9HAR2 1447 aa12.46□□□□□ -0.42
SYNRG-216ENST00000611910 CHMLP26374 656 aa12.45□□□□□ -0.42
SYNRG-216ENST00000611910 NEK4P51957 841 aa12.45□□□□□ -0.42
SYNRG-216ENST00000611910 MCTP1Q6DN14 999 aa12.45□□□□□ -0.42
SYNRG-216ENST00000611910 HDAC5Q9UQL6 1122 aa12.45□□□□□ -0.42
SYNRG-216ENST00000611910 NFAT5O94916 1531 aa12.44□□□□□ -0.42
SYNRG-216ENST00000611910 BTBD11A6QL63 1104 aa12.44□□□□□ -0.42
SYNRG-216ENST00000611910 SURF6O75683 361 aaKnown RBP12.44□□□□□ -0.42
SYNRG-216ENST00000611910 C1orf141Q5JVX7 400 aa12.44□□□□□ -0.42
SYNRG-216ENST00000611910 ZNF530Q6P9A1 599 aaPredicted RBP12.44□□□□□ -0.42
SYNRG-216ENST00000611910 PPP1R42Q7Z4L9 355 aa12.44□□□□□ -0.42
SYNRG-216ENST00000611910 DNAAF4Q8WXU2 420 aa12.44□□□□□ -0.42
SYNRG-216ENST00000611910 ANO2Q9NQ90 1003 aa12.44□□□□□ -0.42
SYNRG-216ENST00000611910 KDM3BQ7LBC6 1761 aa12.44□□□□□ -0.42
SYNRG-216ENST00000611910 CYP2E1P05181 493 aaPredicted RBP12.43□□□□□ -0.42
SYNRG-216ENST00000611910 POLA2Q14181 598 aa12.43□□□□□ -0.42
SYNRG-216ENST00000611910 TSHZ3Q63HK5 1081 aa12.43□□□□□ -0.42
SYNRG-216ENST00000611910 ANP32BQ92688 251 aaKnown RBP12.43□□□□□ -0.42
SYNRG-216ENST00000611910 KIF1BPQ96EK5 621 aa12.43□□□□□ -0.42
SYNRG-216ENST00000611910 PANK2Q9BZ23 570 aa12.43□□□□□ -0.42
SYNRG-216ENST00000611910 LGR6Q9HBX8 967 aa12.43□□□□□ -0.42
SYNRG-216ENST00000611910 LMO7Q8WWI1 1683 aa12.43□□□□□ -0.42
SYNRG-216ENST00000611910 PHRF1Q9P1Y6 1649 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms