RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 RTL1A6NKG5 1358 aa13.34□□□□□ -0.27
CDH4-202ENST00000611855 NUTM2FA1L443 756 aa13.34□□□□□ -0.27
CDH4-202ENST00000611855 ABCC3O15438 1527 aa13.34□□□□□ -0.27
CDH4-202ENST00000611855 RIMS2Q9UQ26 1411 aa13.34□□□□□ -0.27
CDH4-202ENST00000611855 USP48Q86UV5 1035 aa13.34□□□□□ -0.27
CDH4-202ENST00000611855 RPAP2Q8IXW5 612 aaPredicted RBP13.34□□□□□ -0.27
CDH4-202ENST00000611855 PRIMPOLQ96LW4 560 aa13.34□□□□□ -0.27
CDH4-202ENST00000611855 ADCY5O95622 1261 aa13.34□□□□□ -0.27
CDH4-202ENST00000611855 BRD1O95696 1058 aa13.34□□□□□ -0.27
CDH4-202ENST00000611855 MBD3O95983 291 aa13.34□□□□□ -0.27
CDH4-202ENST00000611855 HCLS1P14317 486 aaPredicted RBP13.34□□□□□ -0.27
CDH4-202ENST00000611855 SPC24Q8NBT2 197 aa13.34□□□□□ -0.27
CDH4-202ENST00000611855 PIBF1Q8WXW3 757 aa13.33□□□□□ -0.28
CDH4-202ENST00000611855 MAP2P11137 1827 aaKnown RBP13.33□□□□□ -0.28
CDH4-202ENST00000611855 NEXMIFQ5QGS0 1516 aa13.33□□□□□ -0.28
CDH4-202ENST00000611855 LETM1O95202 739 aaPredicted RBP13.33□□□□□ -0.28
CDH4-202ENST00000611855 KIF20AO95235 890 aa13.33□□□□□ -0.28
CDH4-202ENST00000611855 UNC5CLQ8IV45 518 aa13.33□□□□□ -0.28
CDH4-202ENST00000611855 CHAF1AQ13111 956 aaPredicted RBP13.32□□□□□ -0.28
CDH4-202ENST00000611855 IL25Q9H293 177 aa13.32□□□□□ -0.28
CDH4-202ENST00000611855 CNPY2Q9Y2B0 182 aa13.32□□□□□ -0.28
CDH4-202ENST00000611855 TCHHQ07283 1943 aa13.32□□□□□ -0.28
CDH4-202ENST00000611855 PTPRMP28827 1452 aa13.32□□□□□ -0.28
CDH4-202ENST00000611855 CDK11BP21127 795 aaKnown RBP13.32□□□□□ -0.28
CDH4-202ENST00000611855 SYAP1Q96A49 352 aaPredicted RBP13.32□□□□□ -0.28
CDH4-202ENST00000611855 SIGLEC1Q9BZZ2 1709 aa13.32□□□□□ -0.28
CDH4-202ENST00000611855 ARAP3Q8WWN8 1544 aa13.31□□□□□ -0.28
CDH4-202ENST00000611855 PLCD3Q8N3E9 789 aa13.31□□□□□ -0.28
CDH4-202ENST00000611855 ESYT1Q9BSJ8 1104 aa13.31□□□□□ -0.28
CDH4-202ENST00000611855 IL1RAPL2Q9NP60 686 aa13.31□□□□□ -0.28
CDH4-202ENST00000611855 RIOK3O14730 519 aaKnown RBP13.31□□□□□ -0.28
CDH4-202ENST00000611855 FOXO3O43524 673 aa13.31□□□□□ -0.28
CDH4-202ENST00000611855 LMOD3Q0VAK6 560 aa13.31□□□□□ -0.28
CDH4-202ENST00000611855 ZFYVE9O95405 1425 aa13.31□□□□□ -0.28
CDH4-202ENST00000611855 POGZQ7Z3K3 1410 aa13.31□□□□□ -0.28
CDH4-202ENST00000611855 ARHGEF40Q8TER5 1519 aa13.31□□□□□ -0.28
CDH4-202ENST00000611855 FIBPO43427 364 aa13.31□□□□□ -0.28
CDH4-202ENST00000611855 CHMP3Q9Y3E7 222 aa13.31□□□□□ -0.28
CDH4-202ENST00000611855 LMTK2Q8IWU2 1503 aa13.3□□□□□ -0.28
CDH4-202ENST00000611855 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
CDH4-202ENST00000611855 CPA1P15085 419 aa13.3□□□□□ -0.28
CDH4-202ENST00000611855 COG3Q96JB2 828 aa13.3□□□□□ -0.28
CDH4-202ENST00000611855 NAP1L2Q9ULW6 460 aaPredicted RBP13.3□□□□□ -0.28
CDH4-202ENST00000611855 RGS12O14924 1447 aa13.29□□□□□ -0.28
CDH4-202ENST00000611855 DDX54Q8TDD1 881 aaKnown RBP13.29□□□□□ -0.28
CDH4-202ENST00000611855 PNMA6EA0A0J9YXQ4 647 aa13.29□□□□□ -0.28
CDH4-202ENST00000611855 HMMRO75330 724 aa13.29□□□□□ -0.28
CDH4-202ENST00000611855 FRMPD1Q5SYB0 1578 aa13.29□□□□□ -0.28
CDH4-202ENST00000611855 DLG5Q8TDM6 1919 aa13.29□□□□□ -0.28
CDH4-202ENST00000611855 SRCIN1Q9C0H9 1055 aa13.29□□□□□ -0.28
CDH4-202ENST00000611855 MCCP23508 829 aa13.28□□□□□ -0.28
CDH4-202ENST00000611855 GIMAP6Q6P9H5 292 aa13.28□□□□□ -0.28
CDH4-202ENST00000611855 NUTM1Q86Y26 1132 aa13.28□□□□□ -0.28
CDH4-202ENST00000611855 MX1P20591 662 aa13.28□□□□□ -0.28
CDH4-202ENST00000611855 RIMBP3CA6NJZ7 1639 aa13.28□□□□□ -0.28
CDH4-202ENST00000611855 RIMBP3BA6NNM3 1639 aa13.28□□□□□ -0.28
CDH4-202ENST00000611855 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
CDH4-202ENST00000611855 CHMLP26374 656 aa13.28□□□□□ -0.28
CDH4-202ENST00000611855 MYO5BQ9ULV0 1848 aa13.27□□□□□ -0.28
CDH4-202ENST00000611855 TXNDC2Q86VQ3 553 aa13.27□□□□□ -0.28
CDH4-202ENST00000611855 PYCARDQ9ULZ3 195 aa13.27□□□□□ -0.28
CDH4-202ENST00000611855 ANKRD26Q9UPS8 1709 aa13.26□□□□□ -0.29
CDH4-202ENST00000611855 PHF14O94880 888 aa13.26□□□□□ -0.29
CDH4-202ENST00000611855 LRRCC1Q9C099 1032 aa13.26□□□□□ -0.29
CDH4-202ENST00000611855 FKBP5Q13451 457 aaPredicted RBP13.26□□□□□ -0.29
CDH4-202ENST00000611855 CUL4AQ13619 759 aa13.26□□□□□ -0.29
CDH4-202ENST00000611855 EIF4A2Q14240 407 aaKnown RBP13.26□□□□□ -0.29
CDH4-202ENST00000611855 DIAPH3Q9NSV4 1193 aa13.26□□□□□ -0.29
CDH4-202ENST00000611855 TMEM51Q9NW97 253 aa13.26□□□□□ -0.29
CDH4-202ENST00000611855 HSP90AB2PQ58FF8 381 aa13.26□□□□□ -0.29
CDH4-202ENST00000611855 TSPYL4Q9UJ04 414 aa13.26□□□□□ -0.29
CDH4-202ENST00000611855 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
CDH4-202ENST00000611855 CHL1O00533 1208 aa13.25□□□□□ -0.29
CDH4-202ENST00000611855 NAA30Q147X3 362 aaPredicted RBP13.25□□□□□ -0.29
CDH4-202ENST00000611855 GNAI2P04899 355 aa13.25□□□□□ -0.29
CDH4-202ENST00000611855 MLECQ14165 292 aa13.25□□□□□ -0.29
CDH4-202ENST00000611855 PIK3C2BO00750 1634 aa13.25□□□□□ -0.29
CDH4-202ENST00000611855 HECW2Q9P2P5 1572 aa13.25□□□□□ -0.29
CDH4-202ENST00000611855 KCNJ4P48050 445 aa13.24□□□□□ -0.29
CDH4-202ENST00000611855 AP5Z1O43299 807 aa13.24□□□□□ -0.29
CDH4-202ENST00000611855 GTF2F1P35269 517 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDH4-202ENST00000611855 TRERF1Q96PN7 1200 aa13.24□□□□□ -0.29
CDH4-202ENST00000611855 SLC52A1Q9NWF4 448 aa13.24□□□□□ -0.29
CDH4-202ENST00000611855 LRRFIP2Q9Y608 721 aaKnown RBP13.24□□□□□ -0.29
CDH4-202ENST00000611855 WDR33Q9C0J8 1336 aaKnown RBP13.24□□□□□ -0.29
CDH4-202ENST00000611855 ERICH4A6NGS2 130 aa13.24□□□□□ -0.29
CDH4-202ENST00000611855 TRHP20396 242 aaPredicted RBP13.23□□□□□ -0.29
CDH4-202ENST00000611855 MCM2P49736 904 aa13.23□□□□□ -0.29
CDH4-202ENST00000611855 ZNF592Q92610 1267 aa13.23□□□□□ -0.29
CDH4-202ENST00000611855 C16orf45Q96MC5 204 aaPredicted RBP13.23□□□□□ -0.29
CDH4-202ENST00000611855 SPG7Q9UQ90 795 aa13.23□□□□□ -0.29
CDH4-202ENST00000611855 REREQ9P2R6 1566 aa13.23□□□□□ -0.29
CDH4-202ENST00000611855 CCDC183Q5T5S1 534 aa13.23□□□□□ -0.29
CDH4-202ENST00000611855 NUDT16Q96DE0 195 aaKnown RBP13.23□□□□□ -0.29
CDH4-202ENST00000611855 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.22□□□□□ -0.29
CDH4-202ENST00000611855 DRC7Q8IY82 874 aa13.22□□□□□ -0.29
CDH4-202ENST00000611855 RASEFQ8IZ41 740 aa13.22□□□□□ -0.29
CDH4-202ENST00000611855 OSBPL3Q9H4L5 887 aa13.22□□□□□ -0.29
CDH4-202ENST00000611855 PTPRCP08575 1304 aa13.22□□□□□ -0.29
CDH4-202ENST00000611855 CDC42BPGQ6DT37 1551 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms