RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 CRB1P82279 1406 aa18.43■□□□□ 0.54
PCDHGB1-202ENST00000611598 SALL3Q9BXA9 1300 aa18.42■□□□□ 0.54
PCDHGB1-202ENST00000611598 FAM13BQ9NYF5 915 aa18.42■□□□□ 0.54
PCDHGB1-202ENST00000611598 C3P01024 1663 aa18.42■□□□□ 0.54
PCDHGB1-202ENST00000611598 MBD3O95983 291 aa18.42■□□□□ 0.54
PCDHGB1-202ENST00000611598 CUL4AQ13619 759 aa18.42■□□□□ 0.54
PCDHGB1-202ENST00000611598 GDPD2Q9HCC8 539 aa18.41■□□□□ 0.54
PCDHGB1-202ENST00000611598 ANO2Q9NQ90 1003 aa18.41■□□□□ 0.54
PCDHGB1-202ENST00000611598 UQCRHLA0A096LP55 91 aa18.41■□□□□ 0.54
PCDHGB1-202ENST00000611598 SOX12O15370 315 aa18.41■□□□□ 0.54
PCDHGB1-202ENST00000611598 UQCRHP07919 91 aa18.41■□□□□ 0.54
PCDHGB1-202ENST00000611598 RILPL2Q969X0 211 aa18.4■□□□□ 0.54
PCDHGB1-202ENST00000611598 UPF3BQ9BZI7 483 aaKnown RBP18.4■□□□□ 0.54
PCDHGB1-202ENST00000611598 PNMA6EA0A0J9YXQ4 647 aa18.39■□□□□ 0.54
PCDHGB1-202ENST00000611598 CCDC39Q9UFE4 941 aa18.39■□□□□ 0.54
PCDHGB1-202ENST00000611598 TRIM6-TRIM34B2RNG4 842 aa18.39■□□□□ 0.53
PCDHGB1-202ENST00000611598 GADD45BO75293 160 aaPredicted RBP18.39■□□□□ 0.53
PCDHGB1-202ENST00000611598 GNAI2P04899 355 aa18.39■□□□□ 0.53
PCDHGB1-202ENST00000611598 MX1P20591 662 aa18.39■□□□□ 0.53
PCDHGB1-202ENST00000611598 CHMLP26374 656 aa18.39■□□□□ 0.53
PCDHGB1-202ENST00000611598 UNC5CLQ8IV45 518 aa18.39■□□□□ 0.53
PCDHGB1-202ENST00000611598 TSPYL4Q9UJ04 414 aa18.39■□□□□ 0.53
PCDHGB1-202ENST00000611598 NRXN3Q9Y4C0 1643 aa18.39■□□□□ 0.53
PCDHGB1-202ENST00000611598 CCT4P50991 539 aaKnown RBP18.38■□□□□ 0.53
PCDHGB1-202ENST00000611598 IL25Q9H293 177 aa18.38■□□□□ 0.53
PCDHGB1-202ENST00000611598 MCM2P49736 904 aa18.38■□□□□ 0.53
PCDHGB1-202ENST00000611598 LRRCC1Q9C099 1032 aa18.38■□□□□ 0.53
PCDHGB1-202ENST00000611598 TSPY26PQ9H489 355 aa18.38■□□□□ 0.53
PCDHGB1-202ENST00000611598 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
PCDHGB1-202ENST00000611598 NUTM2FA1L443 756 aa18.37■□□□□ 0.53
PCDHGB1-202ENST00000611598 MCCP23508 829 aa18.37■□□□□ 0.53
PCDHGB1-202ENST00000611598 MCM5P33992 734 aa18.37■□□□□ 0.53
PCDHGB1-202ENST00000611598 MPNDQ8N594 471 aa18.37■□□□□ 0.53
PCDHGB1-202ENST00000611598 TTC21BQ7Z4L5 1316 aa18.36■□□□□ 0.53
PCDHGB1-202ENST00000611598 TUBGCP6Q96RT7 1819 aa18.36■□□□□ 0.53
PCDHGB1-202ENST00000611598 PEAK1Q9H792 1746 aa18.36■□□□□ 0.53
PCDHGB1-202ENST00000611598 MTHFSDQ2M296 383 aaKnown RBP18.36■□□□□ 0.53
PCDHGB1-202ENST00000611598 INTS4Q96HW7 963 aaKnown RBP18.36■□□□□ 0.53
PCDHGB1-202ENST00000611598 MAP3K19Q56UN5 1328 aa18.36■□□□□ 0.53
PCDHGB1-202ENST00000611598 ITSN1Q15811 1721 aa18.36■□□□□ 0.53
PCDHGB1-202ENST00000611598 ZBTB7CA1YPR0 619 aa18.36■□□□□ 0.53
PCDHGB1-202ENST00000611598 NECTIN2Q92692 538 aa18.36■□□□□ 0.53
PCDHGB1-202ENST00000611598 PTMAP06454 111 aaKnown RBP18.35■□□□□ 0.53
PCDHGB1-202ENST00000611598 ANAPC15P60006 121 aa18.35■□□□□ 0.53
PCDHGB1-202ENST00000611598 CSPP1Q1MSJ5 1256 aa18.35■□□□□ 0.53
PCDHGB1-202ENST00000611598 RIMS1Q86UR5 1692 aaKnown RBP18.34■□□□□ 0.53
PCDHGB1-202ENST00000611598 USP48Q86UV5 1035 aa18.34■□□□□ 0.53
PCDHGB1-202ENST00000611598 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.34■□□□□ 0.53
PCDHGB1-202ENST00000611598 MLECQ14165 292 aa18.34■□□□□ 0.53
PCDHGB1-202ENST00000611598 TPRNQ4KMQ1 711 aa18.34■□□□□ 0.53
PCDHGB1-202ENST00000611598 ARID3AQ99856 593 aa18.34■□□□□ 0.53
PCDHGB1-202ENST00000611598 OVOS2A0A0J9YW53 1432 aa18.33■□□□□ 0.53
PCDHGB1-202ENST00000611598 OVOS2Q6IE36 1432 aa18.33■□□□□ 0.53
PCDHGB1-202ENST00000611598 ACEP12821 1306 aa18.33■□□□□ 0.52
PCDHGB1-202ENST00000611598 FKBP5Q13451 457 aaPredicted RBP18.33■□□□□ 0.52
PCDHGB1-202ENST00000611598 RTF1Q92541 710 aaKnown RBP18.33■□□□□ 0.52
PCDHGB1-202ENST00000611598 RGPD1P0DJD0 1748 aa18.32■□□□□ 0.52
PCDHGB1-202ENST00000611598 FLIIQ13045 1269 aa18.32■□□□□ 0.52
PCDHGB1-202ENST00000611598 IL1RAPL2Q9NP60 686 aa18.32■□□□□ 0.52
PCDHGB1-202ENST00000611598 LRRFIP2Q9Y608 721 aaKnown RBP18.32■□□□□ 0.52
PCDHGB1-202ENST00000611598 ATP8B2P98198 1209 aa18.32■□□□□ 0.52
PCDHGB1-202ENST00000611598 SYAP1Q96A49 352 aaPredicted RBP18.32■□□□□ 0.52
PCDHGB1-202ENST00000611598 SPATA31D1Q6ZQQ2 1576 aa18.31■□□□□ 0.52
PCDHGB1-202ENST00000611598 STK31Q9BXU1 1019 aa18.31■□□□□ 0.52
PCDHGB1-202ENST00000611598 SSH2Q76I76 1423 aa18.31■□□□□ 0.52
PCDHGB1-202ENST00000611598 MAP4K4O95819 1239 aaPredicted RBP18.31■□□□□ 0.52
PCDHGB1-202ENST00000611598 SASS6Q6UVJ0 657 aa18.31■□□□□ 0.52
PCDHGB1-202ENST00000611598 ZNF830Q96NB3 372 aaPredicted RBP18.31■□□□□ 0.52
PCDHGB1-202ENST00000611598 SRCIN1Q9C0H9 1055 aa18.31■□□□□ 0.52
PCDHGB1-202ENST00000611598 STAP2Q9UGK3 403 aa18.31■□□□□ 0.52
PCDHGB1-202ENST00000611598 RPAP1Q9BWH6 1393 aaPredicted RBP18.3■□□□□ 0.52
PCDHGB1-202ENST00000611598 LARP6Q9BRS8 491 aaKnown RBP18.3■□□□□ 0.52
PCDHGB1-202ENST00000611598 TCHHQ07283 1943 aa18.3■□□□□ 0.52
PCDHGB1-202ENST00000611598 GNAI3P08754 354 aa18.3■□□□□ 0.52
PCDHGB1-202ENST00000611598 ROBO2Q9HCK4 1378 aa18.29■□□□□ 0.52
PCDHGB1-202ENST00000611598 DYNC1I1O14576 645 aa18.29■□□□□ 0.52
PCDHGB1-202ENST00000611598 NUTM1Q86Y26 1132 aa18.29■□□□□ 0.52
PCDHGB1-202ENST00000611598 IL17RAQ96F46 866 aa18.29■□□□□ 0.52
PCDHGB1-202ENST00000611598 USP25Q9UHP3 1055 aa18.29■□□□□ 0.52
PCDHGB1-202ENST00000611598 WDR33Q9C0J8 1336 aaKnown RBP18.29■□□□□ 0.52
PCDHGB1-202ENST00000611598 KIAA2012Q0VF49 1180 aa18.29■□□□□ 0.52
PCDHGB1-202ENST00000611598 JARID2Q92833 1246 aaPredicted RBP18.29■□□□□ 0.52
PCDHGB1-202ENST00000611598 CNPY2Q9Y2B0 182 aa18.29■□□□□ 0.52
PCDHGB1-202ENST00000611598 TECPR2O15040 1411 aa18.28■□□□□ 0.52
PCDHGB1-202ENST00000611598 MAP7D2Q96T17 732 aa18.28■□□□□ 0.52
PCDHGB1-202ENST00000611598 HSPA4P34932 840 aa18.28■□□□□ 0.52
PCDHGB1-202ENST00000611598 ARHGEF10O15013 1369 aa18.27■□□□□ 0.52
PCDHGB1-202ENST00000611598 DTNBO60941 627 aa18.27■□□□□ 0.52
PCDHGB1-202ENST00000611598 PHF14O94880 888 aa18.27■□□□□ 0.52
PCDHGB1-202ENST00000611598 USP6P35125 1406 aa18.26■□□□□ 0.51
PCDHGB1-202ENST00000611598 C17orf53Q8N3J3 647 aaPredicted RBP18.26■□□□□ 0.51
PCDHGB1-202ENST00000611598 USP44Q9H0E7 712 aa18.26■□□□□ 0.51
PCDHGB1-202ENST00000611598 HCLS1P14317 486 aaPredicted RBP18.26■□□□□ 0.51
PCDHGB1-202ENST00000611598 XRN1Q8IZH2 1706 aaKnown RBP18.25■□□□□ 0.51
PCDHGB1-202ENST00000611598 CCDC30Q5VVM6 783 aa18.25■□□□□ 0.51
PCDHGB1-202ENST00000611598 SIRT1Q96EB6 747 aa18.25■□□□□ 0.51
PCDHGB1-202ENST00000611598 USP31Q70CQ4 1352 aa18.25■□□□□ 0.51
PCDHGB1-202ENST00000611598 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
PCDHGB1-202ENST00000611598 EYA1Q99502 592 aa18.25■□□□□ 0.51
PCDHGB1-202ENST00000611598 TTC12Q9H892 705 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms