RNA–Protein interactions for RNA: ENST00000610852.1

PDE4DIP-238, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-238	ENST00000610852	NFATC2IP	Q8NCF5	419 aa		11.39	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	LAS1L	Q9Y4W2	734 aa	Known RBP	11.39	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	FANCI	Q9NVI1	1328 aa		11.38	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	TOGARAM1	Q9Y4F4	1720 aa		11.38	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	BCL9	O00512	1426 aa		11.38	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	RGS12	O14924	1447 aa		11.38	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	BTBD11	A6QL63	1104 aa		11.37	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	KRT27	Q7Z3Y8	459 aa		11.37	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	TSR2	Q969E8	191 aa	Known RBP	11.37	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	MBIP	Q9NS73	344 aa		11.37	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	TMOD3	Q9NYL9	352 aa		11.37	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	MIS18A	Q9NYP9	233 aa		11.37	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	TSPYL4	Q9UJ04	414 aa		11.37	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	SIPA1L3	O60292	1781 aa	Predicted RBP	11.36	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	DOT1L	Q8TEK3	1739 aa		11.36	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	PRIM1	P49642	420 aa	Known RBP	11.36	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	FAM182B	Q5T319	152 aa		11.36	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	VIRMA	Q69YN4	1812 aa	Known RBP	11.35	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	CENPB	P07199	599 aa	Predicted RBP	11.35	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	PIGB	Q92521	554 aa		11.35	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	ACSBG1	Q96GR2	724 aa		11.35	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	BRWD3	Q6RI45	1802 aa		11.35	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	KDM3B	Q7LBC6	1761 aa		11.34	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	EXOSC9	Q06265	439 aa	Known RBP	11.34	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	ZNF790	Q6PG37	636 aa		11.34	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	FAM196A	Q6ZSG2	479 aa		11.34	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	SYTL4	Q96C24	671 aa	Predicted RBP	11.34	□□□□□ -0.59
PDE4DIP-238	ENST00000610852	KCNQ3	O43525	872 aa		11.33	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	KCNQ2	O43526	872 aa		11.33	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	EIF4A1	P60842	406 aa	Known RBP	11.33	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	SLC39A6	Q13433	755 aa		11.33	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	PAPPA	Q13219	1627 aa		11.32	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	HEG1	Q9ULI3	1381 aa		11.32	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	TTC5	Q8N0Z6	440 aa		11.32	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	C8orf58	Q8NAV2	365 aa		11.32	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	ATG3	Q9NT62	314 aa		11.32	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	NHS	Q6T4R5	1651 aa		11.32	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	ITGB4	P16144	1822 aa		11.32	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	CT47B1	P0C2W7	299 aa	Predicted RBP	11.31	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	KRT24	Q2M2I5	525 aa		11.31	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	TWISTNB	Q3B726	338 aa	Predicted RBP	11.31	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	TSPYL6	Q8N831	410 aa		11.31	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	ASAP1	Q9ULH1	1129 aa		11.31	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	SOS1	Q07889	1333 aa	Predicted RBP	11.31	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	KCP	Q6ZWJ8	1503 aa		11.3	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	ELL2	O00472	640 aa	Predicted RBP	11.3	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	VAMP4	O75379	141 aa		11.3	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	PTF1A	Q7RTS3	328 aa		11.3	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	ZNF496	Q96IT1	587 aa	Predicted RBP	11.3	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	FMNL2	Q96PY5	1086 aa		11.3	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.3	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	UBR2	Q8IWV8	1755 aa		11.29	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	GIGYF1	O75420	1035 aa	Predicted RBP	11.29	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	HOXB7	P09629	217 aa		11.29	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	SMARCC1	Q92922	1105 aa	Predicted RBP	11.29	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	ZNF428	Q96B54	188 aa		11.29	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	PTCD1	O75127	700 aa	Known RBP	11.28	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	RCAN3	Q9UKA8	241 aa		11.28	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	SBF2	Q86WG5	1849 aa		11.28	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	PALLD	Q8WX93	1383 aa		11.28	□□□□□ -0.6
PDE4DIP-238	ENST00000610852	TRIM37	O94972	964 aa		11.27	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	SNRPA1	P09661	255 aa	Known RBP	11.27	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	VSIG10	Q8N0Z9	540 aa		11.27	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	RBM42	Q9BTD8	480 aa	Known RBP	11.27	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	BTAF1	O14981	1849 aa		11.26	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	PRAMEF22	A3QJZ6	481 aa		11.26	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	RARS	P54136	660 aa	Known RBP	11.26	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	ALDH1L2	Q3SY69	923 aa		11.26	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	SLC4A9	Q96Q91	983 aa		11.26	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	CHMP4A	Q9BY43	222 aa		11.26	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	LOC102724428	A0A0B4J2F2	783 aa		11.25	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	SIK1	P57059	783 aa		11.25	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	HDGFL1	Q5TGJ6	251 aa		11.25	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	CCDC30	Q5VVM6	783 aa		11.25	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	SSH1	Q8WYL5	1049 aa		11.25	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.25	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	EP400	Q96L91	3159 aa		11.24	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	EIF2S2	P20042	333 aa	Known RBP	11.24	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	USP16	Q9Y5T5	823 aa		11.24	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	CIC	Q96RK0	1608 aa	Predicted RBP	11.24	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	C5	P01031	1676 aa		11.24	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	ZNF831	Q5JPB2	1677 aa		11.24	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	TCERG1	O14776	1098 aa	Known RBP	11.23	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	BCAR3	O75815	825 aa		11.23	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	APBA3	O96018	575 aa		11.23	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	ATP6V1A	P38606	617 aa		11.23	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	BRPF1	P55201	1214 aa	Predicted RBP	11.23	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	DNAJC10	Q8IXB1	793 aa		11.23	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	NECTIN2	Q92692	538 aa		11.23	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	SMC4	Q9NTJ3	1288 aa		11.23	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	LAMB4	A4D0S4	1761 aa		11.22	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	PLSCR1	O15162	318 aa		11.22	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	STARD3NL	O95772	234 aa		11.22	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	CYP19A1	P11511	503 aa	Predicted RBP	11.22	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	TJP1	Q07157	1748 aa		11.22	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	ITPK1	Q13572	414 aa		11.22	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	MRPL50	Q8N5N7	158 aa	Known RBP	11.22	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	BCL2L13	Q9BXK5	485 aa		11.22	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	STK31	Q9BXU1	1019 aa		11.22	□□□□□ -0.61
PDE4DIP-238	ENST00000610852	TNS1	Q9HBL0	1735 aa	Known RBP	11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms