RNA–Protein interactions for RNA: ENST00000610723.4

TPGS2-220, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 3 BASIC

Gene TPGS2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-220ENST00000610723 SGIP1Q9BQI5 828 aa22.11■■□□□ 1.13
TPGS2-220ENST00000610723 QSER1Q2KHR3 1735 aa22.11■■□□□ 1.13
TPGS2-220ENST00000610723 LINC00116Q8NCU8 138 aa22.1■■□□□ 1.13
TPGS2-220ENST00000610723 ITPK1Q13572 414 aa22.09■■□□□ 1.13
TPGS2-220ENST00000610723 LGR6Q9HBX8 967 aa22.09■■□□□ 1.13
TPGS2-220ENST00000610723 ARXQ96QS3 562 aa22.08■■□□□ 1.13
TPGS2-220ENST00000610723 NUDCQ9Y266 331 aa22.08■■□□□ 1.13
TPGS2-220ENST00000610723 C4BP0C0L5 1744 aa22.08■■□□□ 1.13
TPGS2-220ENST00000610723 TAF1LQ8IZX4 1826 aa22.08■■□□□ 1.12
TPGS2-220ENST00000610723 PHF14O94880 888 aa22.07■■□□□ 1.12
TPGS2-220ENST00000610723 POLD1P28340 1107 aa22.07■■□□□ 1.12
TPGS2-220ENST00000610723 SMIM5Q71RC9 77 aa22.07■■□□□ 1.12
TPGS2-220ENST00000610723 RNMTO43148 476 aaKnown RBP22.06■■□□□ 1.12
TPGS2-220ENST00000610723 FLAD1Q8NFF5 587 aa22.06■■□□□ 1.12
TPGS2-220ENST00000610723 FHDC1Q9C0D6 1143 aaPredicted RBP22.06■■□□□ 1.12
TPGS2-220ENST00000610723 DDX10Q13206 875 aaKnown RBP22.06■■□□□ 1.12
TPGS2-220ENST00000610723 SLC4A9Q96Q91 983 aa22.06■■□□□ 1.12
TPGS2-220ENST00000610723 PTCD1O75127 700 aaKnown RBP22.05■■□□□ 1.12
TPGS2-220ENST00000610723 MSL1Q68DK7 614 aa22.05■■□□□ 1.12
TPGS2-220ENST00000610723 AMIGO3Q86WK7 504 aa22.05■■□□□ 1.12
TPGS2-220ENST00000610723 SLC52A2Q9HAB3 445 aa22.05■■□□□ 1.12
TPGS2-220ENST00000610723 U2AF1L5P0DN76 240 aaPredicted RBP22.04■■□□□ 1.12
TPGS2-220ENST00000610723 PRKAR2BP31323 418 aa22.04■■□□□ 1.12
TPGS2-220ENST00000610723 U2AF1Q01081 240 aaKnown RBP eCLIP22.04■■□□□ 1.12
TPGS2-220ENST00000610723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.03■■□□□ 1.12
TPGS2-220ENST00000610723 GNPATO15228 680 aa22.03■■□□□ 1.12
TPGS2-220ENST00000610723 KLHL34Q8N239 644 aa22.03■■□□□ 1.12
TPGS2-220ENST00000610723 SYT17Q9BSW7 474 aa22.03■■□□□ 1.12
TPGS2-220ENST00000610723 SCN11AQ9UI33 1791 aa22.03■■□□□ 1.12
TPGS2-220ENST00000610723 GAS2L2Q8NHY3 880 aa22.02■■□□□ 1.12
TPGS2-220ENST00000610723 RSPH6AQ9H0K4 717 aa22.02■■□□□ 1.12
TPGS2-220ENST00000610723 DCAF8L1A6NGE4 600 aa22.01■■□□□ 1.11
TPGS2-220ENST00000610723 SSFA2P28290 1259 aa22■■□□□ 1.11
TPGS2-220ENST00000610723 PHACTR3Q96KR7 559 aa22■■□□□ 1.11
TPGS2-220ENST00000610723 MAP3K5Q99683 1374 aa21.99■■□□□ 1.11
TPGS2-220ENST00000610723 GNAT3A8MTJ3 354 aa21.99■■□□□ 1.11
TPGS2-220ENST00000610723 SLC39A6Q13433 755 aa21.99■■□□□ 1.11
TPGS2-220ENST00000610723 RTCBQ9Y3I0 505 aaKnown RBP21.97■■□□□ 1.11
TPGS2-220ENST00000610723 UBR3Q6ZT12 1888 aa21.97■■□□□ 1.11
TPGS2-220ENST00000610723 FCHSD2O94868 740 aa21.97■■□□□ 1.11
TPGS2-220ENST00000610723 MRC1P22897 1456 aa21.97■■□□□ 1.11
TPGS2-220ENST00000610723 RC3H1Q5TC82 1133 aaKnown RBP21.96■■□□□ 1.11
TPGS2-220ENST00000610723 IL17REQ8NFR9 667 aa21.96■■□□□ 1.11
TPGS2-220ENST00000610723 COL24A1Q17RW2 1714 aa21.96■■□□□ 1.11
TPGS2-220ENST00000610723 CNTNAP4Q9C0A0 1308 aa21.95■■□□□ 1.11
TPGS2-220ENST00000610723 ZNF831Q5JPB2 1677 aa21.95■■□□□ 1.1
TPGS2-220ENST00000610723 TEFQ10587 303 aa21.95■■□□□ 1.1
TPGS2-220ENST00000610723 TRAPPC3LQ5T215 181 aa21.95■■□□□ 1.1
TPGS2-220ENST00000610723 RALBP1Q15311 655 aa21.94■■□□□ 1.1
TPGS2-220ENST00000610723 ADAMTS7Q9UKP4 1686 aa21.94■■□□□ 1.1
TPGS2-220ENST00000610723 CRKLP46109 303 aaKnown RBP21.93■■□□□ 1.1
TPGS2-220ENST00000610723 VIRMAQ69YN4 1812 aaKnown RBP21.92■■□□□ 1.1
TPGS2-220ENST00000610723 RPS6KA4O75676 772 aa21.92■■□□□ 1.1
TPGS2-220ENST00000610723 DNAJC10Q8IXB1 793 aa21.92■■□□□ 1.1
TPGS2-220ENST00000610723 COL5A3P25940 1745 aaPredicted RBP21.92■■□□□ 1.1
TPGS2-220ENST00000610723 TTC5Q8N0Z6 440 aa21.91■■□□□ 1.1
TPGS2-220ENST00000610723 ARHGEF1Q92888 912 aaKnown RBP21.91■■□□□ 1.1
TPGS2-220ENST00000610723 TJP1Q07157 1748 aa21.9■■□□□ 1.1
TPGS2-220ENST00000610723 NEFMP07197 916 aa21.89■■□□□ 1.1
TPGS2-220ENST00000610723 ADRA2BP18089 450 aa21.89■■□□□ 1.1
TPGS2-220ENST00000610723 RFC4P35249 363 aa21.89■■□□□ 1.1
TPGS2-220ENST00000610723 NLGN2Q8NFZ4 835 aa21.89■■□□□ 1.1
TPGS2-220ENST00000610723 RTF1Q92541 710 aaKnown RBP21.89■■□□□ 1.1
TPGS2-220ENST00000610723 KCPQ6ZWJ8 1503 aa21.89■■□□□ 1.09
TPGS2-220ENST00000610723 INTS5Q6P9B9 1019 aaKnown RBP21.88■■□□□ 1.09
TPGS2-220ENST00000610723 MCM10Q7L590 875 aa21.88■■□□□ 1.09
TPGS2-220ENST00000610723 CEMIPQ8WUJ3 1361 aa21.87■■□□□ 1.09
TPGS2-220ENST00000610723 ZNF790Q6PG37 636 aa21.87■■□□□ 1.09
TPGS2-220ENST00000610723 PELP1Q8IZL8 1130 aaKnown RBP21.87■■□□□ 1.09
TPGS2-220ENST00000610723 CCDC87Q9NVE4 849 aa21.87■■□□□ 1.09
TPGS2-220ENST00000610723 BTBD11A6QL63 1104 aa21.86■■□□□ 1.09
TPGS2-220ENST00000610723 CYP19A1P11511 503 aaPredicted RBP21.86■■□□□ 1.09
TPGS2-220ENST00000610723 DCTN1Q14203 1278 aa21.86■■□□□ 1.09
TPGS2-220ENST00000610723 GPR162Q16538 588 aa21.86■■□□□ 1.09
TPGS2-220ENST00000610723 VSIG10Q8N0Z9 540 aa21.86■■□□□ 1.09
TPGS2-220ENST00000610723 MYBBP1AQ9BQG0 1328 aaKnown RBP21.85■■□□□ 1.09
TPGS2-220ENST00000610723 CICQ96RK0 1608 aaPredicted RBP21.85■■□□□ 1.09
TPGS2-220ENST00000610723 MYH14Q7Z406 1995 aaKnown RBP21.85■■□□□ 1.09
TPGS2-220ENST00000610723 MMP10P09238 476 aa21.84■■□□□ 1.09
TPGS2-220ENST00000610723 NLGN1Q8N2Q7 840 aa21.84■■□□□ 1.09
TPGS2-220ENST00000610723 ZNF496Q96IT1 587 aaPredicted RBP21.84■■□□□ 1.09
TPGS2-220ENST00000610723 GYS1P13807 737 aa21.83■■□□□ 1.09
TPGS2-220ENST00000610723 PLEKHF1Q96S99 279 aa21.83■■□□□ 1.09
TPGS2-220ENST00000610723 PNNQ9H307 717 aaKnown RBP21.83■■□□□ 1.09
TPGS2-220ENST00000610723 SRP68Q9UHB9 627 aaKnown RBP21.83■■□□□ 1.09
TPGS2-220ENST00000610723 CD2APQ9Y5K6 639 aa21.83■■□□□ 1.09
TPGS2-220ENST00000610723 KCNQ3O43525 872 aa21.82■■□□□ 1.08
TPGS2-220ENST00000610723 HTATSF1O43719 755 aaKnown RBP21.82■■□□□ 1.08
TPGS2-220ENST00000610723 YY1P25490 414 aa21.82■■□□□ 1.08
TPGS2-220ENST00000610723 MAPK8IP3Q9UPT6 1336 aa21.82■■□□□ 1.08
TPGS2-220ENST00000610723 FMNL2Q96PY5 1086 aa21.81■■□□□ 1.08
TPGS2-220ENST00000610723 ZBTB1Q9Y2K1 713 aa21.81■■□□□ 1.08
TPGS2-220ENST00000610723 SIPA1L3O60292 1781 aaPredicted RBP21.81■■□□□ 1.08
TPGS2-220ENST00000610723 HEG1Q9ULI3 1381 aa21.81■■□□□ 1.08
TPGS2-220ENST00000610723 UBR2Q8IWV8 1755 aa21.81■■□□□ 1.08
TPGS2-220ENST00000610723 STARD3NLO95772 234 aa21.8■■□□□ 1.08
TPGS2-220ENST00000610723 CANXP27824 592 aaKnown RBP21.8■■□□□ 1.08
TPGS2-220ENST00000610723 SOS1Q07889 1333 aaPredicted RBP21.8■■□□□ 1.08
TPGS2-220ENST00000610723 USP42Q9H9J4 1324 aaKnown RBP21.79■■□□□ 1.08
TPGS2-220ENST00000610723 ZPR1O75312 459 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms