RNA–Protein interactions for RNA: ENST00000610539.1

PCDHGC4-202, Transcript of protocadherin gamma subfamily C, 4, humanhuman

TSL 4

Gene PCDHGC4, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-202ENST00000610539 UBR3Q6ZT12 1888 aa18.43■□□□□ 0.54
PCDHGC4-202ENST00000610539 CICQ96RK0 1608 aaPredicted RBP18.42■□□□□ 0.54
PCDHGC4-202ENST00000610539 U2SURPO15042 1029 aaKnown RBP18.42■□□□□ 0.54
PCDHGC4-202ENST00000610539 ZEB1P37275 1124 aaPredicted RBP18.42■□□□□ 0.54
PCDHGC4-202ENST00000610539 RSPH6AQ9H0K4 717 aa18.41■□□□□ 0.54
PCDHGC4-202ENST00000610539 NUDCQ9Y266 331 aa18.41■□□□□ 0.54
PCDHGC4-202ENST00000610539 ATF5Q9Y2D1 282 aaPredicted RBP18.41■□□□□ 0.54
PCDHGC4-202ENST00000610539 RNMTO43148 476 aaKnown RBP18.4■□□□□ 0.54
PCDHGC4-202ENST00000610539 ITPK1Q13572 414 aa18.4■□□□□ 0.54
PCDHGC4-202ENST00000610539 NFATC2IPQ8NCF5 419 aa18.4■□□□□ 0.54
PCDHGC4-202ENST00000610539 FLAD1Q8NFF5 587 aa18.4■□□□□ 0.54
PCDHGC4-202ENST00000610539 SLC4A9Q96Q91 983 aa18.4■□□□□ 0.54
PCDHGC4-202ENST00000610539 COL5A3P25940 1745 aaPredicted RBP18.4■□□□□ 0.54
PCDHGC4-202ENST00000610539 COL23A1Q86Y22 540 aaPredicted RBP18.39■□□□□ 0.53
PCDHGC4-202ENST00000610539 LINC00116Q8NCU8 138 aa18.39■□□□□ 0.53
PCDHGC4-202ENST00000610539 GAS2L2Q8NHY3 880 aa18.39■□□□□ 0.53
PCDHGC4-202ENST00000610539 SLC52A2Q9HAB3 445 aa18.39■□□□□ 0.53
PCDHGC4-202ENST00000610539 LGR6Q9HBX8 967 aa18.39■□□□□ 0.53
PCDHGC4-202ENST00000610539 PPP1R1BQ9UD71 204 aaPredicted RBP18.39■□□□□ 0.53
PCDHGC4-202ENST00000610539 FCHSD2O94868 740 aa18.38■□□□□ 0.53
PCDHGC4-202ENST00000610539 ATP6V1AP38606 617 aa18.38■□□□□ 0.53
PCDHGC4-202ENST00000610539 RALBP1Q15311 655 aa18.38■□□□□ 0.53
PCDHGC4-202ENST00000610539 DDX10Q13206 875 aaKnown RBP18.37■□□□□ 0.53
PCDHGC4-202ENST00000610539 MAP3K5Q99683 1374 aa18.37■□□□□ 0.53
PCDHGC4-202ENST00000610539 SSFA2P28290 1259 aa18.36■□□□□ 0.53
PCDHGC4-202ENST00000610539 PRKAR2BP31323 418 aa18.36■□□□□ 0.53
PCDHGC4-202ENST00000610539 AMIGO3Q86WK7 504 aa18.36■□□□□ 0.53
PCDHGC4-202ENST00000610539 AK7Q96M32 723 aa18.36■□□□□ 0.53
PCDHGC4-202ENST00000610539 SIPA1L3O60292 1781 aaPredicted RBP18.35■□□□□ 0.53
PCDHGC4-202ENST00000610539 CEMIPQ8WUJ3 1361 aa18.35■□□□□ 0.53
PCDHGC4-202ENST00000610539 U2AF1L5P0DN76 240 aaPredicted RBP18.35■□□□□ 0.53
PCDHGC4-202ENST00000610539 U2AF1Q01081 240 aaKnown RBP eCLIP18.35■□□□□ 0.53
PCDHGC4-202ENST00000610539 RC3H1Q5TC82 1133 aaKnown RBP18.35■□□□□ 0.53
PCDHGC4-202ENST00000610539 PHACTR3Q96KR7 559 aa18.35■□□□□ 0.53
PCDHGC4-202ENST00000610539 TJP1Q07157 1748 aa18.35■□□□□ 0.53
PCDHGC4-202ENST00000610539 CNTNAP4Q9C0A0 1308 aa18.34■□□□□ 0.53
PCDHGC4-202ENST00000610539 MYH14Q7Z406 1995 aaKnown RBP18.34■□□□□ 0.53
PCDHGC4-202ENST00000610539 GNAT3A8MTJ3 354 aa18.34■□□□□ 0.53
PCDHGC4-202ENST00000610539 ARXQ96QS3 562 aa18.34■□□□□ 0.53
PCDHGC4-202ENST00000610539 UBR2Q8IWV8 1755 aa18.34■□□□□ 0.53
PCDHGC4-202ENST00000610539 UTRNP46939 3433 aa18.33■□□□□ 0.52
PCDHGC4-202ENST00000610539 IL17REQ8NFR9 667 aa18.33■□□□□ 0.52
PCDHGC4-202ENST00000610539 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
PCDHGC4-202ENST00000610539 KCPQ6ZWJ8 1503 aa18.33■□□□□ 0.52
PCDHGC4-202ENST00000610539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.32■□□□□ 0.52
PCDHGC4-202ENST00000610539 POLD1P28340 1107 aa18.31■□□□□ 0.52
PCDHGC4-202ENST00000610539 SYT17Q9BSW7 474 aa18.31■□□□□ 0.52
PCDHGC4-202ENST00000610539 FHDC1Q9C0D6 1143 aaPredicted RBP18.31■□□□□ 0.52
PCDHGC4-202ENST00000610539 GNPATO15228 680 aa18.3■□□□□ 0.52
PCDHGC4-202ENST00000610539 PTCD1O75127 700 aaKnown RBP18.3■□□□□ 0.52
PCDHGC4-202ENST00000610539 ADRA2BP18089 450 aa18.3■□□□□ 0.52
PCDHGC4-202ENST00000610539 VSIG10Q8N0Z9 540 aa18.29■□□□□ 0.52
PCDHGC4-202ENST00000610539 MYBBP1AQ9BQG0 1328 aaKnown RBP18.28■□□□□ 0.52
PCDHGC4-202ENST00000610539 MSH5O43196 834 aa18.28■□□□□ 0.52
PCDHGC4-202ENST00000610539 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
PCDHGC4-202ENST00000610539 RPS6KA4O75676 772 aa18.28■□□□□ 0.52
PCDHGC4-202ENST00000610539 SLC39A6Q13433 755 aa18.28■□□□□ 0.52
PCDHGC4-202ENST00000610539 PLEKHF1Q96S99 279 aa18.28■□□□□ 0.52
PCDHGC4-202ENST00000610539 RTCBQ9Y3I0 505 aaKnown RBP18.28■□□□□ 0.52
PCDHGC4-202ENST00000610539 PHF14O94880 888 aa18.27■□□□□ 0.52
PCDHGC4-202ENST00000610539 SMIM5Q71RC9 77 aa18.27■□□□□ 0.52
PCDHGC4-202ENST00000610539 CRKLP46109 303 aaKnown RBP18.26■□□□□ 0.51
PCDHGC4-202ENST00000610539 TEFQ10587 303 aa18.26■□□□□ 0.51
PCDHGC4-202ENST00000610539 GOLGB1Q14789 3259 aaKnown RBP18.26■□□□□ 0.51
PCDHGC4-202ENST00000610539 C4AP0C0L4 1744 aa18.26■□□□□ 0.51
PCDHGC4-202ENST00000610539 TRAPPC3LQ5T215 181 aa18.25■□□□□ 0.51
PCDHGC4-202ENST00000610539 ZNF790Q6PG37 636 aa18.25■□□□□ 0.51
PCDHGC4-202ENST00000610539 PRKRIP1Q9H875 184 aaPredicted RBP18.25■□□□□ 0.51
PCDHGC4-202ENST00000610539 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
PCDHGC4-202ENST00000610539 CYP19A1P11511 503 aaPredicted RBP18.24■□□□□ 0.51
PCDHGC4-202ENST00000610539 MSL1Q68DK7 614 aa18.24■□□□□ 0.51
PCDHGC4-202ENST00000610539 INTS5Q6P9B9 1019 aaKnown RBP18.24■□□□□ 0.51
PCDHGC4-202ENST00000610539 DNAJC10Q8IXB1 793 aa18.24■□□□□ 0.51
PCDHGC4-202ENST00000610539 ARHGEF1Q92888 912 aaKnown RBP18.24■□□□□ 0.51
PCDHGC4-202ENST00000610539 PNNQ9H307 717 aaKnown RBP18.24■□□□□ 0.51
PCDHGC4-202ENST00000610539 TTC5Q8N0Z6 440 aa18.22■□□□□ 0.51
PCDHGC4-202ENST00000610539 RTF1Q92541 710 aaKnown RBP18.22■□□□□ 0.51
PCDHGC4-202ENST00000610539 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
PCDHGC4-202ENST00000610539 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
PCDHGC4-202ENST00000610539 CCDC87Q9NVE4 849 aa18.21■□□□□ 0.51
PCDHGC4-202ENST00000610539 NEFMP07197 916 aa18.2■□□□□ 0.5
PCDHGC4-202ENST00000610539 GYS1P13807 737 aa18.2■□□□□ 0.5
PCDHGC4-202ENST00000610539 MCM10Q7L590 875 aa18.2■□□□□ 0.5
PCDHGC4-202ENST00000610539 CD2APQ9Y5K6 639 aa18.2■□□□□ 0.5
PCDHGC4-202ENST00000610539 SOS1Q07889 1333 aaPredicted RBP18.2■□□□□ 0.5
PCDHGC4-202ENST00000610539 BTBD11A6QL63 1104 aa18.19■□□□□ 0.5
PCDHGC4-202ENST00000610539 RFC4P35249 363 aa18.19■□□□□ 0.5
PCDHGC4-202ENST00000610539 NFE2L2Q16236 605 aa18.19■□□□□ 0.5
PCDHGC4-202ENST00000610539 NLGN1Q8N2Q7 840 aa18.19■□□□□ 0.5
PCDHGC4-202ENST00000610539 TEX13AQ9BXU3 409 aaPredicted RBP18.19■□□□□ 0.5
PCDHGC4-202ENST00000610539 DCAF8L1A6NGE4 600 aa18.18■□□□□ 0.5
PCDHGC4-202ENST00000610539 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
PCDHGC4-202ENST00000610539 KIF13BQ9NQT8 1826 aa18.18■□□□□ 0.5
PCDHGC4-202ENST00000610539 USP42Q9H9J4 1324 aaKnown RBP18.18■□□□□ 0.5
PCDHGC4-202ENST00000610539 STARD3NLO95772 234 aa18.17■□□□□ 0.5
PCDHGC4-202ENST00000610539 DCTN1Q14203 1278 aa18.17■□□□□ 0.5
PCDHGC4-202ENST00000610539 NLGN2Q8NFZ4 835 aa18.17■□□□□ 0.5
PCDHGC4-202ENST00000610539 ZBTB1Q9Y2K1 713 aa18.17■□□□□ 0.5
PCDHGC4-202ENST00000610539 ZNF316A6NFI3 1004 aaPredicted RBP18.16■□□□□ 0.5
PCDHGC4-202ENST00000610539 KCNQ3O43525 872 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms