RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 SRCAPQ6ZRS2 3230 aa17.11■□□□□ 0.33
CD9-212ENST00000610354 ZNF316A6NFI3 1004 aaPredicted RBP17.1■□□□□ 0.33
CD9-212ENST00000610354 C5P01031 1676 aa17.1■□□□□ 0.33
CD9-212ENST00000610354 U2AF1L5P0DN76 240 aaPredicted RBP17.09■□□□□ 0.33
CD9-212ENST00000610354 PRKAR2BP31323 418 aa17.09■□□□□ 0.33
CD9-212ENST00000610354 U2AF1Q01081 240 aaKnown RBP eCLIP17.09■□□□□ 0.33
CD9-212ENST00000610354 SMARCC1Q92922 1105 aaPredicted RBP17.09■□□□□ 0.33
CD9-212ENST00000610354 NUDCQ9Y266 331 aa17.09■□□□□ 0.33
CD9-212ENST00000610354 QSER1Q2KHR3 1735 aa17.08■□□□□ 0.33
CD9-212ENST00000610354 RNMTO43148 476 aaKnown RBP17.08■□□□□ 0.32
CD9-212ENST00000610354 NFATC2IPQ8NCF5 419 aa17.08■□□□□ 0.32
CD9-212ENST00000610354 CABP4P57796 275 aa17.07■□□□□ 0.32
CD9-212ENST00000610354 SLC4A9Q96Q91 983 aa17.07■□□□□ 0.32
CD9-212ENST00000610354 LOC102724428A0A0B4J2F2 783 aa17.06■□□□□ 0.32
CD9-212ENST00000610354 FCHSD2O94868 740 aa17.06■□□□□ 0.32
CD9-212ENST00000610354 SIK1P57059 783 aa17.06■□□□□ 0.32
CD9-212ENST00000610354 PRKRIP1Q9H875 184 aaPredicted RBP17.06■□□□□ 0.32
CD9-212ENST00000610354 MRC1P22897 1456 aa17.06■□□□□ 0.32
CD9-212ENST00000610354 PNPLA7Q6ZV29 1317 aa17.06■□□□□ 0.32
CD9-212ENST00000610354 MYBBP1AQ9BQG0 1328 aaKnown RBP17.06■□□□□ 0.32
CD9-212ENST00000610354 ITPK1Q13572 414 aa17.05■□□□□ 0.32
CD9-212ENST00000610354 IL17REQ8NFR9 667 aa17.05■□□□□ 0.32
CD9-212ENST00000610354 LINC00116Q8NCU8 138 aa17.04■□□□□ 0.32
CD9-212ENST00000610354 GAS2L2Q8NHY3 880 aa17.04■□□□□ 0.32
CD9-212ENST00000610354 SLC52A2Q9HAB3 445 aa17.04■□□□□ 0.32
CD9-212ENST00000610354 C4BP0C0L5 1744 aa17.04■□□□□ 0.32
CD9-212ENST00000610354 MAP3K5Q99683 1374 aa17.03■□□□□ 0.32
CD9-212ENST00000610354 ZBTB7AO95365 584 aa17.03■□□□□ 0.32
CD9-212ENST00000610354 AMIGO3Q86WK7 504 aa17.03■□□□□ 0.32
CD9-212ENST00000610354 SIPA1L3O60292 1781 aaPredicted RBP17.03■□□□□ 0.32
CD9-212ENST00000610354 ZNF831Q5JPB2 1677 aa17.03■□□□□ 0.32
CD9-212ENST00000610354 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
CD9-212ENST00000610354 GNAT3A8MTJ3 354 aa17.02■□□□□ 0.32
CD9-212ENST00000610354 SMIM5Q71RC9 77 aa17.02■□□□□ 0.32
CD9-212ENST00000610354 PLEKHF1Q96S99 279 aa17.02■□□□□ 0.32
CD9-212ENST00000610354 DLG5Q8TDM6 1919 aa17.02■□□□□ 0.31
CD9-212ENST00000610354 ATP6V1AP38606 617 aa17.01■□□□□ 0.31
CD9-212ENST00000610354 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
CD9-212ENST00000610354 TFCP2L1Q9NZI6 479 aa17.01■□□□□ 0.31
CD9-212ENST00000610354 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
CD9-212ENST00000610354 MYH14Q7Z406 1995 aaKnown RBP17.01■□□□□ 0.31
CD9-212ENST00000610354 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
CD9-212ENST00000610354 PTGER2P43116 358 aa17■□□□□ 0.31
CD9-212ENST00000610354 SLC39A6Q13433 755 aa17■□□□□ 0.31
CD9-212ENST00000610354 COL23A1Q86Y22 540 aaPredicted RBP17■□□□□ 0.31
CD9-212ENST00000610354 SPON1Q9HCB6 807 aa17■□□□□ 0.31
CD9-212ENST00000610354 TJP1Q07157 1748 aa17■□□□□ 0.31
CD9-212ENST00000610354 COL24A1Q17RW2 1714 aa17■□□□□ 0.31
CD9-212ENST00000610354 CEMIPQ8WUJ3 1361 aa17■□□□□ 0.31
CD9-212ENST00000610354 SGIP1Q9BQI5 828 aa16.99■□□□□ 0.31
CD9-212ENST00000610354 PTCD1O75127 700 aaKnown RBP16.98■□□□□ 0.31
CD9-212ENST00000610354 KCPQ6ZWJ8 1503 aa16.98■□□□□ 0.31
CD9-212ENST00000610354 UBR2Q8IWV8 1755 aa16.98■□□□□ 0.31
CD9-212ENST00000610354 KCNA4P22459 653 aa16.97■□□□□ 0.31
CD9-212ENST00000610354 MTFR1LQ9H019 292 aa16.97■□□□□ 0.31
CD9-212ENST00000610354 CICQ96RK0 1608 aaPredicted RBP16.97■□□□□ 0.31
CD9-212ENST00000610354 DCTN1Q14203 1278 aa16.96■□□□□ 0.31
CD9-212ENST00000610354 MCM10Q7L590 875 aa16.96■□□□□ 0.31
CD9-212ENST00000610354 CCDC184Q52MB2 194 aa16.96■□□□□ 0.3
CD9-212ENST00000610354 AK7Q96M32 723 aa16.96■□□□□ 0.3
CD9-212ENST00000610354 SLC16A10Q8TF71 515 aa16.95■□□□□ 0.3
CD9-212ENST00000610354 KCNQ3O43525 872 aa16.94■□□□□ 0.3
CD9-212ENST00000610354 TEFQ10587 303 aa16.94■□□□□ 0.3
CD9-212ENST00000610354 NFE2L2Q16236 605 aa16.94■□□□□ 0.3
CD9-212ENST00000610354 DNAJC10Q8IXB1 793 aa16.94■□□□□ 0.3
CD9-212ENST00000610354 CNTNAP4Q9C0A0 1308 aa16.93■□□□□ 0.3
CD9-212ENST00000610354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.93■□□□□ 0.3
CD9-212ENST00000610354 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
CD9-212ENST00000610354 PHF14O94880 888 aa16.93■□□□□ 0.3
CD9-212ENST00000610354 RC3H1Q5TC82 1133 aaKnown RBP16.93■□□□□ 0.3
CD9-212ENST00000610354 ADAMTS8Q9UP79 889 aa16.93■□□□□ 0.3
CD9-212ENST00000610354 GNPATO15228 680 aa16.92■□□□□ 0.3
CD9-212ENST00000610354 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
CD9-212ENST00000610354 SSFA2P28290 1259 aa16.91■□□□□ 0.3
CD9-212ENST00000610354 CRKLP46109 303 aaKnown RBP16.91■□□□□ 0.3
CD9-212ENST00000610354 INTS5Q6P9B9 1019 aaKnown RBP16.91■□□□□ 0.3
CD9-212ENST00000610354 ZNF790Q6PG37 636 aa16.91■□□□□ 0.3
CD9-212ENST00000610354 CCDC146Q8IYE0 955 aa16.91■□□□□ 0.3
CD9-212ENST00000610354 FLAD1Q8NFF5 587 aa16.91■□□□□ 0.3
CD9-212ENST00000610354 RTF1Q92541 710 aaKnown RBP16.91■□□□□ 0.3
CD9-212ENST00000610354 ZNF496Q96IT1 587 aaPredicted RBP16.91■□□□□ 0.3
CD9-212ENST00000610354 RPS6KA4O75676 772 aa16.9■□□□□ 0.3
CD9-212ENST00000610354 CYP19A1P11511 503 aaPredicted RBP16.9■□□□□ 0.3
CD9-212ENST00000610354 MSL1Q68DK7 614 aa16.9■□□□□ 0.3
CD9-212ENST00000610354 THUMPD2Q9BTF0 503 aaKnown RBP16.9■□□□□ 0.3
CD9-212ENST00000610354 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
CD9-212ENST00000610354 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
CD9-212ENST00000610354 PPP1R1BQ9UD71 204 aaPredicted RBP16.89■□□□□ 0.29
CD9-212ENST00000610354 MAPK8IP3Q9UPT6 1336 aa16.88■□□□□ 0.29
CD9-212ENST00000610354 NEFMP07197 916 aa16.88■□□□□ 0.29
CD9-212ENST00000610354 TMPOP42166 694 aaKnown RBP16.88■□□□□ 0.29
CD9-212ENST00000610354 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
CD9-212ENST00000610354 VSIG10Q8N0Z9 540 aa16.88■□□□□ 0.29
CD9-212ENST00000610354 ARHGEF1Q92888 912 aaKnown RBP16.88■□□□□ 0.29
CD9-212ENST00000610354 ARXQ96QS3 562 aa16.88■□□□□ 0.29
CD9-212ENST00000610354 RTCBQ9Y3I0 505 aaKnown RBP16.88■□□□□ 0.29
CD9-212ENST00000610354 C4AP0C0L4 1744 aa16.88■□□□□ 0.29
CD9-212ENST00000610354 HEG1Q9ULI3 1381 aa16.87■□□□□ 0.29
CD9-212ENST00000610354 TTC5Q8N0Z6 440 aa16.87■□□□□ 0.29
CD9-212ENST00000610354 MIS18AQ9NYP9 233 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms