RNA–Protein interactions for RNA: ENST00000609293.1

LINC01990-201, Transcript of long intergenic non-protein coding RNA 1990, humanhuman

TSL 1 (best) BASIC

Gene LINC01990, Length 1,487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01990-201ENST00000609293 SETD5Q9C0A6 1442 aa11.69□□□□□ -0.54
LINC01990-201ENST00000609293 IQGAP3Q86VI3 1631 aa11.69□□□□□ -0.54
LINC01990-201ENST00000609293 FAM50AQ14320 339 aaKnown RBP11.69□□□□□ -0.54
LINC01990-201ENST00000609293 Q3C1V9 767 aa11.69□□□□□ -0.54
LINC01990-201ENST00000609293 FAM160A2Q8N612 972 aaPredicted RBP11.69□□□□□ -0.54
LINC01990-201ENST00000609293 NLRP7Q8WX94 980 aa11.69□□□□□ -0.54
LINC01990-201ENST00000609293 AMOTL2Q9Y2J4 779 aa11.69□□□□□ -0.54
LINC01990-201ENST00000609293 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
LINC01990-201ENST00000609293 NRXN3Q9Y4C0 1643 aa11.68□□□□□ -0.54
LINC01990-201ENST00000609293 MST1RQ04912 1400 aa11.68□□□□□ -0.54
LINC01990-201ENST00000609293 TULP1O00294 542 aaPredicted RBP11.68□□□□□ -0.54
LINC01990-201ENST00000609293 MSS51Q4VC12 460 aa11.68□□□□□ -0.54
LINC01990-201ENST00000609293 CYP4X1Q8N118 509 aa11.68□□□□□ -0.54
LINC01990-201ENST00000609293 SRCAPQ6ZRS2 3230 aa11.67□□□□□ -0.54
LINC01990-201ENST00000609293 NALCNQ8IZF0 1738 aa11.67□□□□□ -0.54
LINC01990-201ENST00000609293 RBM6P78332 1123 aaKnown RBP11.67□□□□□ -0.54
LINC01990-201ENST00000609293 LRRC59Q96AG4 307 aaKnown RBP11.67□□□□□ -0.54
LINC01990-201ENST00000609293 C8orf37Q96NL8 207 aa11.67□□□□□ -0.54
LINC01990-201ENST00000609293 AAASQ9NRG9 546 aa11.67□□□□□ -0.54
LINC01990-201ENST00000609293 PHOX2BQ99453 314 aa11.66□□□□□ -0.54
LINC01990-201ENST00000609293 QTRT2Q9H974 415 aaKnown RBP11.66□□□□□ -0.54
LINC01990-201ENST00000609293 SPHKAPQ2M3C7 1700 aa11.66□□□□□ -0.54
LINC01990-201ENST00000609293 SETBP1Q9Y6X0 1596 aa11.66□□□□□ -0.54
LINC01990-201ENST00000609293 CRIPAKQ8N1N5 446 aa11.65□□□□□ -0.54
LINC01990-201ENST00000609293 PNPLA6Q8IY17 1366 aa11.65□□□□□ -0.55
LINC01990-201ENST00000609293 TOR4AQ9NXH8 423 aa11.64□□□□□ -0.55
LINC01990-201ENST00000609293 ST8SIA5O15466 376 aa11.63□□□□□ -0.55
LINC01990-201ENST00000609293 NGLY1Q96IV0 654 aa11.63□□□□□ -0.55
LINC01990-201ENST00000609293 ADGRL3Q9HAR2 1447 aa11.63□□□□□ -0.55
LINC01990-201ENST00000609293 ATAD2Q6PL18 1390 aa11.63□□□□□ -0.55
LINC01990-201ENST00000609293 POTECB2RU33 542 aa11.63□□□□□ -0.55
LINC01990-201ENST00000609293 HAP1P54257 671 aaPredicted RBP11.63□□□□□ -0.55
LINC01990-201ENST00000609293 CTC1Q2NKJ3 1217 aa11.63□□□□□ -0.55
LINC01990-201ENST00000609293 LAMC1P11047 1609 aa11.62□□□□□ -0.55
LINC01990-201ENST00000609293 AVPP01185 164 aa11.62□□□□□ -0.55
LINC01990-201ENST00000609293 DDX17Q92841 729 aaKnown RBP11.62□□□□□ -0.55
LINC01990-201ENST00000609293 PRDM9Q9NQV7 894 aa11.62□□□□□ -0.55
LINC01990-201ENST00000609293 EP400Q96L91 3159 aa11.61□□□□□ -0.55
LINC01990-201ENST00000609293 ADAMTS2O95450 1211 aa11.61□□□□□ -0.55
LINC01990-201ENST00000609293 MAP2K5Q13163 448 aa11.61□□□□□ -0.55
LINC01990-201ENST00000609293 KIF1BO60333 1816 aa11.61□□□□□ -0.55
LINC01990-201ENST00000609293 MARF1Q9Y4F3 1742 aaKnown RBP11.6□□□□□ -0.55
LINC01990-201ENST00000609293 TTC24A2A3L6 582 aaPredicted RBP11.6□□□□□ -0.55
LINC01990-201ENST00000609293 AXIN1O15169 862 aa11.6□□□□□ -0.55
LINC01990-201ENST00000609293 ZNF326Q5BKZ1 582 aaKnown RBP11.6□□□□□ -0.55
LINC01990-201ENST00000609293 RNF19BQ6ZMZ0 732 aa11.6□□□□□ -0.55
LINC01990-201ENST00000609293 NUP155O75694 1391 aa11.6□□□□□ -0.55
LINC01990-201ENST00000609293 CD46P15529 392 aa11.59□□□□□ -0.55
LINC01990-201ENST00000609293 USP46P62068 366 aa11.59□□□□□ -0.55
LINC01990-201ENST00000609293 METP08581 1390 aa11.59□□□□□ -0.55
LINC01990-201ENST00000609293 KDM4AO75164 1064 aa11.58□□□□□ -0.56
LINC01990-201ENST00000609293 USP21Q9UK80 565 aa11.58□□□□□ -0.56
LINC01990-201ENST00000609293 ROCK1Q13464 1354 aa11.58□□□□□ -0.56
LINC01990-201ENST00000609293 C1orf167Q5SNV9 1468 aa11.58□□□□□ -0.56
LINC01990-201ENST00000609293 COL22A1Q8NFW1 1626 aaPredicted RBP11.58□□□□□ -0.56
LINC01990-201ENST00000609293 MMP16P51512 607 aa11.57□□□□□ -0.56
LINC01990-201ENST00000609293 TRPC5Q9UL62 973 aaPredicted RBP11.57□□□□□ -0.56
LINC01990-201ENST00000609293 NEXMIFQ5QGS0 1516 aa11.57□□□□□ -0.56
LINC01990-201ENST00000609293 PTCH1Q13635 1447 aa11.57□□□□□ -0.56
LINC01990-201ENST00000609293 WNT7AO00755 349 aa11.57□□□□□ -0.56
LINC01990-201ENST00000609293 SMCPP49901 116 aaPredicted RBP11.57□□□□□ -0.56
LINC01990-201ENST00000609293 USB1Q9BQ65 265 aaKnown RBP11.57□□□□□ -0.56
LINC01990-201ENST00000609293 CLTCL1P53675 1640 aa11.56□□□□□ -0.56
LINC01990-201ENST00000609293 IRF6O14896 467 aa11.56□□□□□ -0.56
LINC01990-201ENST00000609293 TRIM32Q13049 653 aa11.55□□□□□ -0.56
LINC01990-201ENST00000609293 TREML4Q6UXN2 200 aa11.55□□□□□ -0.56
LINC01990-201ENST00000609293 SNIP1Q8TAD8 396 aaKnown RBP11.55□□□□□ -0.56
LINC01990-201ENST00000609293 ATRNO75882 1429 aa11.55□□□□□ -0.56
LINC01990-201ENST00000609293 SOS2Q07890 1332 aaPredicted RBP11.55□□□□□ -0.56
LINC01990-201ENST00000609293 MINK1Q8N4C8 1332 aaPredicted RBP11.55□□□□□ -0.56
LINC01990-201ENST00000609293 LCE2AQ5TA79 106 aaPredicted RBP11.54□□□□□ -0.56
LINC01990-201ENST00000609293 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.53□□□□□ -0.56
LINC01990-201ENST00000609293 FNBP4Q8N3X1 1017 aaPredicted RBP11.53□□□□□ -0.56
LINC01990-201ENST00000609293 REPIN1Q9BWE0 567 aaKnown RBP11.53□□□□□ -0.56
LINC01990-201ENST00000609293 C11orf95C9JLR9 678 aaPredicted RBP11.52□□□□□ -0.56
LINC01990-201ENST00000609293 DXOO77932 396 aaKnown RBP11.52□□□□□ -0.56
LINC01990-201ENST00000609293 CCDC125Q86Z20 511 aa11.52□□□□□ -0.56
LINC01990-201ENST00000609293 ORAI2Q96SN7 254 aa11.52□□□□□ -0.56
LINC01990-201ENST00000609293 MDM2Q00987 491 aaPredicted RBP11.51□□□□□ -0.57
LINC01990-201ENST00000609293 STK17AQ9UEE5 414 aa11.51□□□□□ -0.57
LINC01990-201ENST00000609293 BRWD3Q6RI45 1802 aa11.51□□□□□ -0.57
LINC01990-201ENST00000609293 MYOM2P54296 1465 aa11.51□□□□□ -0.57
LINC01990-201ENST00000609293 ITGAEP38570 1179 aa11.51□□□□□ -0.57
LINC01990-201ENST00000609293 ROBO2Q9HCK4 1378 aa11.5□□□□□ -0.57
LINC01990-201ENST00000609293 PPLO60437 1756 aa11.5□□□□□ -0.57
LINC01990-201ENST00000609293 CDC42BPGQ6DT37 1551 aa11.5□□□□□ -0.57
LINC01990-201ENST00000609293 DACH1Q9UI36 760 aa11.5□□□□□ -0.57
LINC01990-201ENST00000609293 HFM1A2PYH4 1435 aa11.49□□□□□ -0.57
LINC01990-201ENST00000609293 BCL9LQ86UU0 1499 aa11.49□□□□□ -0.57
LINC01990-201ENST00000609293 CCDC24Q8N4L8 307 aa11.49□□□□□ -0.57
LINC01990-201ENST00000609293 GMPR2Q9P2T1 348 aaKnown RBP11.49□□□□□ -0.57
LINC01990-201ENST00000609293 KDM2AQ9Y2K7 1162 aa11.49□□□□□ -0.57
LINC01990-201ENST00000609293 NPHP3Q7Z494 1330 aa11.49□□□□□ -0.57
LINC01990-201ENST00000609293 PRAG1Q86YV5 1406 aa11.49□□□□□ -0.57
LINC01990-201ENST00000609293 CLCN1P35523 988 aa11.48□□□□□ -0.57
LINC01990-201ENST00000609293 MRGPRX2Q96LB1 330 aa11.48□□□□□ -0.57
LINC01990-201ENST00000609293 PXDNQ92626 1479 aa11.48□□□□□ -0.57
LINC01990-201ENST00000609293 HOXA2O43364 376 aa11.47□□□□□ -0.57
LINC01990-201ENST00000609293 SMPD1P17405 629 aa11.47□□□□□ -0.57
LINC01990-201ENST00000609293 KRI1Q8N9T8 703 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms