RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 IL17REQ8NFR9 667 aa16.19■□□□□ 0.18
LINC00963-212ENST00000608669 GNAT3A8MTJ3 354 aa16.18■□□□□ 0.18
LINC00963-212ENST00000608669 TXNRD1Q16881 649 aa16.18■□□□□ 0.18
LINC00963-212ENST00000608669 ANO8Q9HCE9 1232 aaPredicted RBP16.18■□□□□ 0.18
LINC00963-212ENST00000608669 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
LINC00963-212ENST00000608669 PLEKHG2Q9H7P9 1386 aa16.17■□□□□ 0.18
LINC00963-212ENST00000608669 HSP90AB1P08238 724 aaKnown RBP16.17■□□□□ 0.18
LINC00963-212ENST00000608669 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
LINC00963-212ENST00000608669 C5P01031 1676 aa16.17■□□□□ 0.18
LINC00963-212ENST00000608669 TUBGCP6Q96RT7 1819 aa16.17■□□□□ 0.18
LINC00963-212ENST00000608669 NFE2L2Q16236 605 aa16.16■□□□□ 0.18
LINC00963-212ENST00000608669 ATG3Q9NT62 314 aa16.16■□□□□ 0.18
LINC00963-212ENST00000608669 TAF1LQ8IZX4 1826 aa16.15■□□□□ 0.18
LINC00963-212ENST00000608669 NEFMP07197 916 aa16.15■□□□□ 0.18
LINC00963-212ENST00000608669 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
LINC00963-212ENST00000608669 RUNDC1Q96C34 613 aa16.15■□□□□ 0.18
LINC00963-212ENST00000608669 SLC52A2Q9HAB3 445 aa16.15■□□□□ 0.18
LINC00963-212ENST00000608669 MIS18AQ9NYP9 233 aa16.15■□□□□ 0.18
LINC00963-212ENST00000608669 SALL2Q9Y467 1007 aaPredicted RBP16.15■□□□□ 0.18
LINC00963-212ENST00000608669 TJP1Q07157 1748 aa16.14■□□□□ 0.17
LINC00963-212ENST00000608669 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
LINC00963-212ENST00000608669 APAF1O14727 1248 aa16.14■□□□□ 0.17
LINC00963-212ENST00000608669 KCNQ3O43525 872 aa16.14■□□□□ 0.17
LINC00963-212ENST00000608669 PTCD1O75127 700 aaKnown RBP16.14■□□□□ 0.17
LINC00963-212ENST00000608669 TMPOP42166 694 aaKnown RBP16.14■□□□□ 0.17
LINC00963-212ENST00000608669 RIPK4P57078 832 aa16.14■□□□□ 0.17
LINC00963-212ENST00000608669 RBM42Q9BTD8 480 aaKnown RBP16.14■□□□□ 0.17
LINC00963-212ENST00000608669 CCNL1Q9UK58 526 aaPredicted RBP16.14■□□□□ 0.17
LINC00963-212ENST00000608669 PLSCR1O15162 318 aa16.13■□□□□ 0.17
LINC00963-212ENST00000608669 R3HDM1Q15032 1099 aaKnown RBP16.13■□□□□ 0.17
LINC00963-212ENST00000608669 ZNF827Q17R98 1081 aa16.13■□□□□ 0.17
LINC00963-212ENST00000608669 RTF1Q92541 710 aaKnown RBP16.13■□□□□ 0.17
LINC00963-212ENST00000608669 SLC4A9Q96Q91 983 aa16.13■□□□□ 0.17
LINC00963-212ENST00000608669 KCPQ6ZWJ8 1503 aa16.13■□□□□ 0.17
LINC00963-212ENST00000608669 UBR2Q8IWV8 1755 aa16.13■□□□□ 0.17
LINC00963-212ENST00000608669 TEFQ10587 303 aa16.12■□□□□ 0.17
LINC00963-212ENST00000608669 CEMIPQ8WUJ3 1361 aa16.12■□□□□ 0.17
LINC00963-212ENST00000608669 ITPK1Q13572 414 aa16.11■□□□□ 0.17
LINC00963-212ENST00000608669 PDGFDQ9GZP0 370 aaPredicted RBP16.11■□□□□ 0.17
LINC00963-212ENST00000608669 C4BP0C0L5 1744 aa16.11■□□□□ 0.17
LINC00963-212ENST00000608669 KDM3BQ7LBC6 1761 aa16.1■□□□□ 0.17
LINC00963-212ENST00000608669 LINC00116Q8NCU8 138 aa16.1■□□□□ 0.17
LINC00963-212ENST00000608669 TRIM35Q9UPQ4 493 aa16.1■□□□□ 0.17
LINC00963-212ENST00000608669 COL5A3P25940 1745 aaPredicted RBP16.1■□□□□ 0.17
LINC00963-212ENST00000608669 LOC102724428A0A0B4J2F2 783 aa16.09■□□□□ 0.17
LINC00963-212ENST00000608669 SIK1P57059 783 aa16.09■□□□□ 0.17
LINC00963-212ENST00000608669 AMIGO3Q86WK7 504 aa16.09■□□□□ 0.17
LINC00963-212ENST00000608669 PNNQ9H307 717 aaKnown RBP16.09■□□□□ 0.17
LINC00963-212ENST00000608669 ATP6V1AP38606 617 aa16.08■□□□□ 0.16
LINC00963-212ENST00000608669 LAS1LQ9Y4W2 734 aaKnown RBP16.08■□□□□ 0.16
LINC00963-212ENST00000608669 PRAMEF22A3QJZ6 481 aa16.07■□□□□ 0.16
LINC00963-212ENST00000608669 BTBD11A6QL63 1104 aa16.07■□□□□ 0.16
LINC00963-212ENST00000608669 SMARCC1Q92922 1105 aaPredicted RBP16.07■□□□□ 0.16
LINC00963-212ENST00000608669 PHF14O94880 888 aa16.05■□□□□ 0.16
LINC00963-212ENST00000608669 DNAJC10Q8IXB1 793 aa16.05■□□□□ 0.16
LINC00963-212ENST00000608669 TTC5Q8N0Z6 440 aa16.05■□□□□ 0.16
LINC00963-212ENST00000608669 ZNF496Q96IT1 587 aaPredicted RBP16.05■□□□□ 0.16
LINC00963-212ENST00000608669 CASZ1Q86V15 1759 aa16.05■□□□□ 0.16
LINC00963-212ENST00000608669 MYH14Q7Z406 1995 aaKnown RBP16.04■□□□□ 0.16
LINC00963-212ENST00000608669 UBR3Q6ZT12 1888 aa16.04■□□□□ 0.16
LINC00963-212ENST00000608669 PIP4K2AP48426 406 aaPredicted RBP16.04■□□□□ 0.16
LINC00963-212ENST00000608669 ZNF790Q6PG37 636 aa16.04■□□□□ 0.16
LINC00963-212ENST00000608669 STK32BQ9NY57 414 aa16.04■□□□□ 0.16
LINC00963-212ENST00000608669 CCER2I3L3R5 266 aa16.03■□□□□ 0.16
LINC00963-212ENST00000608669 SLC15A2Q16348 729 aa16.03■□□□□ 0.16
LINC00963-212ENST00000608669 KRT24Q2M2I5 525 aa16.03■□□□□ 0.16
LINC00963-212ENST00000608669 SLC27A3Q5K4L6 730 aa16.03■□□□□ 0.16
LINC00963-212ENST00000608669 AKT1S1Q96B36 256 aa16.03■□□□□ 0.16
LINC00963-212ENST00000608669 HTATSF1O43719 755 aaKnown RBP16.02■□□□□ 0.16
LINC00963-212ENST00000608669 NBPF14Q5TI25 921 aa16.02■□□□□ 0.16
LINC00963-212ENST00000608669 TSPYL4Q9UJ04 414 aa16.02■□□□□ 0.16
LINC00963-212ENST00000608669 ZNF831Q5JPB2 1677 aa16.02■□□□□ 0.15
LINC00963-212ENST00000608669 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
LINC00963-212ENST00000608669 GNPATO15228 680 aa16.01■□□□□ 0.15
LINC00963-212ENST00000608669 TAF7Q15545 349 aaPredicted RBP16.01■□□□□ 0.15
LINC00963-212ENST00000608669 TFCP2L1Q9NZI6 479 aa16.01■□□□□ 0.15
LINC00963-212ENST00000608669 C4AP0C0L4 1744 aa16.01■□□□□ 0.15
LINC00963-212ENST00000608669 HEG1Q9ULI3 1381 aa16■□□□□ 0.15
LINC00963-212ENST00000608669 LAMB4A4D0S4 1761 aa16■□□□□ 0.15
LINC00963-212ENST00000608669 PNPLA7Q6ZV29 1317 aa16■□□□□ 0.15
LINC00963-212ENST00000608669 MSH5O43196 834 aa16■□□□□ 0.15
LINC00963-212ENST00000608669 ZBTB7AO95365 584 aa16■□□□□ 0.15
LINC00963-212ENST00000608669 LMOD3Q0VAK6 560 aa16■□□□□ 0.15
LINC00963-212ENST00000608669 AK7Q96M32 723 aa16■□□□□ 0.15
LINC00963-212ENST00000608669 QSER1Q2KHR3 1735 aa15.99■□□□□ 0.15
LINC00963-212ENST00000608669 CRKLP46109 303 aaKnown RBP15.99■□□□□ 0.15
LINC00963-212ENST00000608669 MSL1Q68DK7 614 aa15.99■□□□□ 0.15
LINC00963-212ENST00000608669 TSR2Q969E8 191 aaKnown RBP15.99■□□□□ 0.15
LINC00963-212ENST00000608669 NECTIN2Q92692 538 aa15.98■□□□□ 0.15
LINC00963-212ENST00000608669 FMNL2Q96PY5 1086 aa15.98■□□□□ 0.15
LINC00963-212ENST00000608669 ZBTB1Q9Y2K1 713 aa15.98■□□□□ 0.15
LINC00963-212ENST00000608669 ZNF330Q9Y3S2 320 aaPredicted RBP15.98■□□□□ 0.15
LINC00963-212ENST00000608669 COL23A1Q86Y22 540 aaPredicted RBP15.97■□□□□ 0.15
LINC00963-212ENST00000608669 WWC1Q8IX03 1113 aa15.97■□□□□ 0.15
LINC00963-212ENST00000608669 CYP19A1P11511 503 aaPredicted RBP15.96■□□□□ 0.15
LINC00963-212ENST00000608669 CANXP27824 592 aaKnown RBP15.96■□□□□ 0.15
LINC00963-212ENST00000608669 EIF4A1P60842 406 aaKnown RBP15.96■□□□□ 0.15
LINC00963-212ENST00000608669 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
LINC00963-212ENST00000608669 MBIPQ9NS73 344 aa15.96■□□□□ 0.15
LINC00963-212ENST00000608669 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms