RNA–Protein interactions for RNA: ENST00000607102.1

CNN2-212, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-212ENST00000607102 SOS1Q07889 1333 aaPredicted RBP20.84■□□□□ 0.93
CNN2-212ENST00000607102 RCAN3Q9UKA8 241 aa20.84■□□□□ 0.93
CNN2-212ENST00000607102 SIPA1L3O60292 1781 aaPredicted RBP20.83■□□□□ 0.93
CNN2-212ENST00000607102 BTBD11A6QL63 1104 aa20.83■□□□□ 0.93
CNN2-212ENST00000607102 ONECUT3O60422 494 aaPredicted RBP20.82■□□□□ 0.92
CNN2-212ENST00000607102 RBM6P78332 1123 aaKnown RBP20.82■□□□□ 0.92
CNN2-212ENST00000607102 EXOSC9Q06265 439 aaKnown RBP20.81■□□□□ 0.92
CNN2-212ENST00000607102 KDM3BQ7LBC6 1761 aa20.8■□□□□ 0.92
CNN2-212ENST00000607102 TMOD3Q9NYL9 352 aa20.8■□□□□ 0.92
CNN2-212ENST00000607102 TTC5Q8N0Z6 440 aa20.79■□□□□ 0.92
CNN2-212ENST00000607102 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.78■□□□□ 0.92
CNN2-212ENST00000607102 NFATC2IPQ8NCF5 419 aa20.78■□□□□ 0.92
CNN2-212ENST00000607102 HOXB7P09629 217 aa20.77■□□□□ 0.92
CNN2-212ENST00000607102 TWISTNBQ3B726 338 aaPredicted RBP20.77■□□□□ 0.92
CNN2-212ENST00000607102 SEPT12Q8IYM1 358 aa20.77■□□□□ 0.92
CNN2-212ENST00000607102 MARCH10Q8NA82 808 aaPredicted RBP20.76■□□□□ 0.91
CNN2-212ENST00000607102 MIS18AQ9NYP9 233 aa20.76■□□□□ 0.91
CNN2-212ENST00000607102 TOGARAM1Q9Y4F4 1720 aa20.75■□□□□ 0.91
CNN2-212ENST00000607102 NEFLP07196 543 aa20.75■□□□□ 0.91
CNN2-212ENST00000607102 RXRBP28702 533 aa20.75■□□□□ 0.91
CNN2-212ENST00000607102 ALDH1L2Q3SY69 923 aa20.75■□□□□ 0.91
CNN2-212ENST00000607102 ZNF790Q6PG37 636 aa20.75■□□□□ 0.91
CNN2-212ENST00000607102 BCL9O00512 1426 aa20.75■□□□□ 0.91
CNN2-212ENST00000607102 DOT1LQ8TEK3 1739 aa20.75■□□□□ 0.91
CNN2-212ENST00000607102 EIF4A1P60842 406 aaKnown RBP20.73■□□□□ 0.91
CNN2-212ENST00000607102 ITGB4P16144 1822 aa20.72■□□□□ 0.91
CNN2-212ENST00000607102 RARSP54136 660 aaKnown RBP20.72■□□□□ 0.91
CNN2-212ENST00000607102 C8orf58Q8NAV2 365 aa20.72■□□□□ 0.91
CNN2-212ENST00000607102 FMNL2Q96PY5 1086 aa20.72■□□□□ 0.91
CNN2-212ENST00000607102 SUPT16HQ9Y5B9 1047 aaKnown RBP20.72■□□□□ 0.91
CNN2-212ENST00000607102 PAPPAQ13219 1627 aa20.71■□□□□ 0.91
CNN2-212ENST00000607102 VAMP4O75379 141 aa20.71■□□□□ 0.91
CNN2-212ENST00000607102 SYTL4Q96C24 671 aaPredicted RBP20.71■□□□□ 0.91
CNN2-212ENST00000607102 CCDC30Q5VVM6 783 aa20.7■□□□□ 0.9
CNN2-212ENST00000607102 SMC4Q9NTJ3 1288 aa20.7■□□□□ 0.9
CNN2-212ENST00000607102 KIF16BQ96L93 1317 aa20.7■□□□□ 0.9
CNN2-212ENST00000607102 ELL2O00472 640 aaPredicted RBP20.69■□□□□ 0.9
CNN2-212ENST00000607102 CANXP27824 592 aaKnown RBP20.69■□□□□ 0.9
CNN2-212ENST00000607102 KRT27Q7Z3Y8 459 aa20.69■□□□□ 0.9
CNN2-212ENST00000607102 TSPYL6Q8N831 410 aa20.69■□□□□ 0.9
CNN2-212ENST00000607102 STK31Q9BXU1 1019 aa20.69■□□□□ 0.9
CNN2-212ENST00000607102 KAT6BQ8WYB5 2073 aa20.68■□□□□ 0.9
CNN2-212ENST00000607102 PRIM1P49642 420 aaKnown RBP20.68■□□□□ 0.9
CNN2-212ENST00000607102 RRP1P56182 461 aaKnown RBP20.68■□□□□ 0.9
CNN2-212ENST00000607102 PIGBQ92521 554 aa20.68■□□□□ 0.9
CNN2-212ENST00000607102 RNF123Q5XPI4 1314 aa20.68■□□□□ 0.9
CNN2-212ENST00000607102 UBR2Q8IWV8 1755 aa20.67■□□□□ 0.9
CNN2-212ENST00000607102 IPO8O15397 1037 aaKnown RBP20.67■□□□□ 0.9
CNN2-212ENST00000607102 SNRPA1P09661 255 aaKnown RBP20.67■□□□□ 0.9
CNN2-212ENST00000607102 MS4A1P11836 297 aa20.67■□□□□ 0.9
CNN2-212ENST00000607102 SLC39A6Q13433 755 aa20.67■□□□□ 0.9
CNN2-212ENST00000607102 SMARCC1Q92922 1105 aaPredicted RBP20.67■□□□□ 0.9
CNN2-212ENST00000607102 HEG1Q9ULI3 1381 aa20.67■□□□□ 0.9
CNN2-212ENST00000607102 BRPF1P55201 1214 aaPredicted RBP20.66■□□□□ 0.9
CNN2-212ENST00000607102 HDGFL1Q5TGJ6 251 aa20.66■□□□□ 0.9
CNN2-212ENST00000607102 FAM196AQ6ZSG2 479 aa20.66■□□□□ 0.9
CNN2-212ENST00000607102 NHSQ6T4R5 1651 aa20.65■□□□□ 0.9
CNN2-212ENST00000607102 KCNQ3O43525 872 aa20.65■□□□□ 0.9
CNN2-212ENST00000607102 GIGYF1O75420 1035 aaPredicted RBP20.65■□□□□ 0.9
CNN2-212ENST00000607102 ILDR1Q86SU0 546 aaPredicted RBP20.65■□□□□ 0.9
CNN2-212ENST00000607102 VSIG10Q8N0Z9 540 aa20.65■□□□□ 0.9
CNN2-212ENST00000607102 SSH1Q8WYL5 1049 aa20.65■□□□□ 0.9
CNN2-212ENST00000607102 ACSBG1Q96GR2 724 aa20.65■□□□□ 0.9
CNN2-212ENST00000607102 TEX13AQ9BXU3 409 aaPredicted RBP20.65■□□□□ 0.9
CNN2-212ENST00000607102 KRT24Q2M2I5 525 aa20.64■□□□□ 0.89
CNN2-212ENST00000607102 ZNF496Q96IT1 587 aaPredicted RBP20.64■□□□□ 0.89
CNN2-212ENST00000607102 CACNA1FO60840 1977 aa20.64■□□□□ 0.89
CNN2-212ENST00000607102 RGS17Q9UGC6 210 aaPredicted RBP20.63■□□□□ 0.89
CNN2-212ENST00000607102 KCPQ6ZWJ8 1503 aa20.63■□□□□ 0.89
CNN2-212ENST00000607102 BRWD3Q6RI45 1802 aa20.62■□□□□ 0.89
CNN2-212ENST00000607102 LAMB4A4D0S4 1761 aa20.62■□□□□ 0.89
CNN2-212ENST00000607102 BCAR3O75815 825 aa20.62■□□□□ 0.89
CNN2-212ENST00000607102 ATG3Q9NT62 314 aa20.62■□□□□ 0.89
CNN2-212ENST00000607102 ERBB4Q15303 1308 aa20.61■□□□□ 0.89
CNN2-212ENST00000607102 ZKSCAN2Q63HK3 967 aa20.61■□□□□ 0.89
CNN2-212ENST00000607102 BCL2L13Q9BXK5 485 aa20.61■□□□□ 0.89
CNN2-212ENST00000607102 ASAP1Q9ULH1 1129 aa20.61■□□□□ 0.89
CNN2-212ENST00000607102 RGS12O14924 1447 aa20.61■□□□□ 0.89
CNN2-212ENST00000607102 PTCD1O75127 700 aaKnown RBP20.6■□□□□ 0.89
CNN2-212ENST00000607102 EIF2S2P20042 333 aaKnown RBP20.6■□□□□ 0.89
CNN2-212ENST00000607102 HMGB2P26583 209 aaKnown RBP20.6■□□□□ 0.89
CNN2-212ENST00000607102 POTEAQ6S8J7 498 aa20.6■□□□□ 0.89
CNN2-212ENST00000607102 MRPL50Q8N5N7 158 aaKnown RBP20.6■□□□□ 0.89
CNN2-212ENST00000607102 ARHGAP45Q92619 1136 aa20.6■□□□□ 0.89
CNN2-212ENST00000607102 FRAT1Q92837 279 aaPredicted RBP20.6■□□□□ 0.89
CNN2-212ENST00000607102 DBF4Q9UBU7 674 aaPredicted RBP20.6■□□□□ 0.89
CNN2-212ENST00000607102 PTPRCP08575 1304 aa20.59■□□□□ 0.89
CNN2-212ENST00000607102 RBM42Q9BTD8 480 aaKnown RBP20.59■□□□□ 0.89
CNN2-212ENST00000607102 SBF2Q86WG5 1849 aa20.59■□□□□ 0.89
CNN2-212ENST00000607102 STARD3NLO95772 234 aa20.58■□□□□ 0.89
CNN2-212ENST00000607102 PDE3AQ14432 1141 aa20.58■□□□□ 0.89
CNN2-212ENST00000607102 API5Q9BZZ5 524 aaKnown RBP20.58■□□□□ 0.89
CNN2-212ENST00000607102 BCL11BQ9C0K0 894 aaPredicted RBP20.58■□□□□ 0.89
CNN2-212ENST00000607102 PALLDQ8WX93 1383 aa20.58■□□□□ 0.88
CNN2-212ENST00000607102 C5P01031 1676 aa20.58■□□□□ 0.88
CNN2-212ENST00000607102 SLC4A2P04920 1241 aa20.57■□□□□ 0.88
CNN2-212ENST00000607102 ERICH6BQ5W0A0 696 aa20.57■□□□□ 0.88
CNN2-212ENST00000607102 FTSJ3Q8IY81 847 aaKnown RBP20.57■□□□□ 0.88
CNN2-212ENST00000607102 BTAF1O14981 1849 aa20.56■□□□□ 0.88
CNN2-212ENST00000607102 ATF7IPQ6VMQ6 1270 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms