RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 DDB1Q16531 1140 aa21.39■■□□□ 1.01
PMF1-206ENST00000606952 ZNF428Q96B54 188 aa21.39■■□□□ 1.01
PMF1-206ENST00000606952 EXOSC9Q06265 439 aaKnown RBP21.38■■□□□ 1.01
PMF1-206ENST00000606952 ZNF772Q68DY9 489 aaPredicted RBP21.37■■□□□ 1.01
PMF1-206ENST00000606952 TSPYL4Q9UJ04 414 aa21.37■■□□□ 1.01
PMF1-206ENST00000606952 LAS1LQ9Y4W2 734 aaKnown RBP21.37■■□□□ 1.01
PMF1-206ENST00000606952 BCL9O00512 1426 aa21.37■■□□□ 1.01
PMF1-206ENST00000606952 HEG1Q9ULI3 1381 aa21.36■■□□□ 1.01
PMF1-206ENST00000606952 FAM98CQ17RN3 349 aaKnown RBP21.36■■□□□ 1.01
PMF1-206ENST00000606952 DDX54Q8TDD1 881 aaKnown RBP21.36■■□□□ 1.01
PMF1-206ENST00000606952 VAMP4O75379 141 aa21.33■■□□□ 1.01
PMF1-206ENST00000606952 QTRT2Q9H974 415 aaKnown RBP21.33■■□□□ 1.01
PMF1-206ENST00000606952 CACNA1FO60840 1977 aa21.33■■□□□ 1.01
PMF1-206ENST00000606952 BTBD11A6QL63 1104 aa21.32■■□□□ 1
PMF1-206ENST00000606952 RARSP54136 660 aaKnown RBP21.32■■□□□ 1
PMF1-206ENST00000606952 BRPF1P55201 1214 aaPredicted RBP21.32■■□□□ 1
PMF1-206ENST00000606952 MARCH10Q8NA82 808 aaPredicted RBP21.32■■□□□ 1
PMF1-206ENST00000606952 HOXB7P09629 217 aa21.31■■□□□ 1
PMF1-206ENST00000606952 TWISTNBQ3B726 338 aaPredicted RBP21.31■■□□□ 1
PMF1-206ENST00000606952 ALDH1L2Q3SY69 923 aa21.31■■□□□ 1
PMF1-206ENST00000606952 C8orf58Q8NAV2 365 aa21.31■■□□□ 1
PMF1-206ENST00000606952 MIS18AQ9NYP9 233 aa21.31■■□□□ 1
PMF1-206ENST00000606952 SUPT16HQ9Y5B9 1047 aaKnown RBP21.31■■□□□ 1
PMF1-206ENST00000606952 LAMB4A4D0S4 1761 aa21.31■■□□□ 1
PMF1-206ENST00000606952 KCPQ6ZWJ8 1503 aa21.3■■□□□ 1
PMF1-206ENST00000606952 BRWD3Q6RI45 1802 aa21.3■■□□□ 1
PMF1-206ENST00000606952 CABP4P57796 275 aa21.3■■□□□ 1
PMF1-206ENST00000606952 EIF4A1P60842 406 aaKnown RBP21.3■■□□□ 1
PMF1-206ENST00000606952 TSPYL6Q8N831 410 aa21.3■■□□□ 1
PMF1-206ENST00000606952 NFATC2IPQ8NCF5 419 aa21.3■■□□□ 1
PMF1-206ENST00000606952 NHSQ6T4R5 1651 aa21.3■■□□□ 1
PMF1-206ENST00000606952 CICQ96RK0 1608 aaPredicted RBP21.29■■□□□ 1
PMF1-206ENST00000606952 C5P01031 1676 aa21.28■■□□□ 1
PMF1-206ENST00000606952 SBF2Q86WG5 1849 aa21.28■■□□□ 1
PMF1-206ENST00000606952 RBM6P78332 1123 aaKnown RBP21.28■■□□□ 1
PMF1-206ENST00000606952 ZNF790Q6PG37 636 aa21.28■■□□□ 1
PMF1-206ENST00000606952 RGS17Q9UGC6 210 aaPredicted RBP21.28■■□□□ 1
PMF1-206ENST00000606952 RRP1P56182 461 aaKnown RBP21.27■■□□□ 1
PMF1-206ENST00000606952 ZNF831Q5JPB2 1677 aa21.25■□□□□ 0.99
PMF1-206ENST00000606952 KCNQ3O43525 872 aa21.25■□□□□ 0.99
PMF1-206ENST00000606952 KRT24Q2M2I5 525 aa21.25■□□□□ 0.99
PMF1-206ENST00000606952 SEPT12Q8IYM1 358 aa21.25■□□□□ 0.99
PMF1-206ENST00000606952 TMOD3Q9NYL9 352 aa21.25■□□□□ 0.99
PMF1-206ENST00000606952 SSH1Q8WYL5 1049 aa21.24■□□□□ 0.99
PMF1-206ENST00000606952 BCAR3O75815 825 aa21.23■□□□□ 0.99
PMF1-206ENST00000606952 PIGBQ92521 554 aa21.23■□□□□ 0.99
PMF1-206ENST00000606952 CHMP4AQ9BY43 222 aa21.23■□□□□ 0.99
PMF1-206ENST00000606952 GIGYF1O75420 1035 aaPredicted RBP21.22■□□□□ 0.99
PMF1-206ENST00000606952 A0A0G2JS52 829 aa21.21■□□□□ 0.99
PMF1-206ENST00000606952 MYT1Q01538 1121 aa21.21■□□□□ 0.99
PMF1-206ENST00000606952 SLC39A6Q13433 755 aa21.21■□□□□ 0.99
PMF1-206ENST00000606952 POTEAQ6S8J7 498 aa21.21■□□□□ 0.99
PMF1-206ENST00000606952 TTC5Q8N0Z6 440 aa21.21■□□□□ 0.99
PMF1-206ENST00000606952 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.21■□□□□ 0.99
PMF1-206ENST00000606952 KIF16BQ96L93 1317 aa21.21■□□□□ 0.99
PMF1-206ENST00000606952 ELL2O00472 640 aaPredicted RBP21.2■□□□□ 0.98
PMF1-206ENST00000606952 MRPL50Q8N5N7 158 aaKnown RBP21.2■□□□□ 0.98
PMF1-206ENST00000606952 ZNF496Q96IT1 587 aaPredicted RBP21.2■□□□□ 0.98
PMF1-206ENST00000606952 FMNL2Q96PY5 1086 aa21.2■□□□□ 0.98
PMF1-206ENST00000606952 SMC4Q9NTJ3 1288 aa21.2■□□□□ 0.98
PMF1-206ENST00000606952 BTAF1O14981 1849 aa21.2■□□□□ 0.98
PMF1-206ENST00000606952 RXRBP28702 533 aa21.19■□□□□ 0.98
PMF1-206ENST00000606952 KAT6BQ8WYB5 2073 aa21.19■□□□□ 0.98
PMF1-206ENST00000606952 TJP1Q07157 1748 aa21.18■□□□□ 0.98
PMF1-206ENST00000606952 PRIM1P49642 420 aaKnown RBP21.18■□□□□ 0.98
PMF1-206ENST00000606952 CCDC30Q5VVM6 783 aa21.18■□□□□ 0.98
PMF1-206ENST00000606952 ATG3Q9NT62 314 aa21.18■□□□□ 0.98
PMF1-206ENST00000606952 RGS12O14924 1447 aa21.18■□□□□ 0.98
PMF1-206ENST00000606952 VSIG10Q8N0Z9 540 aa21.17■□□□□ 0.98
PMF1-206ENST00000606952 ARHGAP45Q92619 1136 aa21.17■□□□□ 0.98
PMF1-206ENST00000606952 N4BP2Q86UW6 1770 aaPredicted RBP21.16■□□□□ 0.98
PMF1-206ENST00000606952 SNRPA1P09661 255 aaKnown RBP21.16■□□□□ 0.98
PMF1-206ENST00000606952 BCL2L13Q9BXK5 485 aa21.16■□□□□ 0.98
PMF1-206ENST00000606952 LY75O60449 1722 aa21.15■□□□□ 0.98
PMF1-206ENST00000606952 PDE3AQ14432 1141 aa21.15■□□□□ 0.98
PMF1-206ENST00000606952 HDGFL1Q5TGJ6 251 aa21.15■□□□□ 0.98
PMF1-206ENST00000606952 ERBB4Q15303 1308 aa21.14■□□□□ 0.97
PMF1-206ENST00000606952 NEFLP07196 543 aa21.14■□□□□ 0.97
PMF1-206ENST00000606952 ERICH6BQ5W0A0 696 aa21.14■□□□□ 0.97
PMF1-206ENST00000606952 ASAP1Q9ULH1 1129 aa21.14■□□□□ 0.97
PMF1-206ENST00000606952 RREB1Q92766 1687 aa21.14■□□□□ 0.97
PMF1-206ENST00000606952 ZKSCAN2Q63HK3 967 aa21.13■□□□□ 0.97
PMF1-206ENST00000606952 KRT27Q7Z3Y8 459 aa21.13■□□□□ 0.97
PMF1-206ENST00000606952 PTPRCP08575 1304 aa21.12■□□□□ 0.97
PMF1-206ENST00000606952 IPO8O15397 1037 aaKnown RBP21.12■□□□□ 0.97
PMF1-206ENST00000606952 SMARCC1Q92922 1105 aaPredicted RBP21.12■□□□□ 0.97
PMF1-206ENST00000606952 ACSBG1Q96GR2 724 aa21.12■□□□□ 0.97
PMF1-206ENST00000606952 STK31Q9BXU1 1019 aa21.12■□□□□ 0.97
PMF1-206ENST00000606952 COL5A3P25940 1745 aaPredicted RBP21.12■□□□□ 0.97
PMF1-206ENST00000606952 PLIN1O60240 522 aa21.11■□□□□ 0.97
PMF1-206ENST00000606952 ATF7IPQ6VMQ6 1270 aa21.11■□□□□ 0.97
PMF1-206ENST00000606952 FAM196AQ6ZSG2 479 aa21.11■□□□□ 0.97
PMF1-206ENST00000606952 PRAMEF22A3QJZ6 481 aa21.1■□□□□ 0.97
PMF1-206ENST00000606952 KCNQ2O43526 872 aa21.1■□□□□ 0.97
PMF1-206ENST00000606952 MS4A1P11836 297 aa21.1■□□□□ 0.97
PMF1-206ENST00000606952 SYTL4Q96C24 671 aaPredicted RBP21.1■□□□□ 0.97
PMF1-206ENST00000606952 TEX13AQ9BXU3 409 aaPredicted RBP21.1■□□□□ 0.97
PMF1-206ENST00000606952 NOB1Q9ULX3 412 aaKnown RBP21.1■□□□□ 0.97
PMF1-206ENST00000606952 PALLDQ8WX93 1383 aa21.1■□□□□ 0.97
PMF1-206ENST00000606952 SLC4A2P04920 1241 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms