RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 MTFR1LQ9H019 292 aa22.07■■□□□ 1.12
LINC00240-203ENST00000606878 PPP1R1BQ9UD71 204 aaPredicted RBP22.07■■□□□ 1.12
LINC00240-203ENST00000606878 TOGARAM1Q9Y4F4 1720 aa22.06■■□□□ 1.12
LINC00240-203ENST00000606878 ITGB4P16144 1822 aa22.06■■□□□ 1.12
LINC00240-203ENST00000606878 NEFMP07197 916 aa22.06■■□□□ 1.12
LINC00240-203ENST00000606878 FLAD1Q8NFF5 587 aa22.05■■□□□ 1.12
LINC00240-203ENST00000606878 PNNQ9H307 717 aaKnown RBP22.05■■□□□ 1.12
LINC00240-203ENST00000606878 PNPLA7Q6ZV29 1317 aa22.05■■□□□ 1.12
LINC00240-203ENST00000606878 MYBBP1AQ9BQG0 1328 aaKnown RBP22.05■■□□□ 1.12
LINC00240-203ENST00000606878 LY75O60449 1722 aa22.04■■□□□ 1.12
LINC00240-203ENST00000606878 MSH5O43196 834 aa22.04■■□□□ 1.12
LINC00240-203ENST00000606878 AK7Q96M32 723 aa22.04■■□□□ 1.12
LINC00240-203ENST00000606878 PTCD1O75127 700 aaKnown RBP22.03■■□□□ 1.12
LINC00240-203ENST00000606878 ITPK1Q13572 414 aa22.03■■□□□ 1.12
LINC00240-203ENST00000606878 IL17REQ8NFR9 667 aa22.03■■□□□ 1.12
LINC00240-203ENST00000606878 COL23A1Q86Y22 540 aaPredicted RBP22.02■■□□□ 1.12
LINC00240-203ENST00000606878 LINC00116Q8NCU8 138 aa22.02■■□□□ 1.12
LINC00240-203ENST00000606878 PAPPAQ13219 1627 aa22.02■■□□□ 1.11
LINC00240-203ENST00000606878 MAP3K5Q99683 1374 aa22.01■■□□□ 1.11
LINC00240-203ENST00000606878 TEFQ10587 303 aa22.01■■□□□ 1.11
LINC00240-203ENST00000606878 SLC4A9Q96Q91 983 aa22.01■■□□□ 1.11
LINC00240-203ENST00000606878 PRKRIP1Q9H875 184 aaPredicted RBP22.01■■□□□ 1.11
LINC00240-203ENST00000606878 LRP5O75197 1615 aa22■■□□□ 1.11
LINC00240-203ENST00000606878 PTGER2P43116 358 aa22■■□□□ 1.11
LINC00240-203ENST00000606878 RTF1Q92541 710 aaKnown RBP22■■□□□ 1.11
LINC00240-203ENST00000606878 HTATSF1O43719 755 aaKnown RBP21.98■■□□□ 1.11
LINC00240-203ENST00000606878 SLC39A6Q13433 755 aa21.98■■□□□ 1.11
LINC00240-203ENST00000606878 RC3H1Q5TC82 1133 aaKnown RBP21.98■■□□□ 1.11
LINC00240-203ENST00000606878 POLD1P28340 1107 aa21.97■■□□□ 1.11
LINC00240-203ENST00000606878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.96■■□□□ 1.11
LINC00240-203ENST00000606878 GNPATO15228 680 aa21.96■■□□□ 1.11
LINC00240-203ENST00000606878 PHF14O94880 888 aa21.95■■□□□ 1.1
LINC00240-203ENST00000606878 SSFA2P28290 1259 aa21.95■■□□□ 1.1
LINC00240-203ENST00000606878 TTC5Q8N0Z6 440 aa21.95■■□□□ 1.1
LINC00240-203ENST00000606878 PLEKHF1Q96S99 279 aa21.95■■□□□ 1.1
LINC00240-203ENST00000606878 SGIP1Q9BQI5 828 aa21.95■■□□□ 1.1
LINC00240-203ENST00000606878 RTCBQ9Y3I0 505 aaKnown RBP21.95■■□□□ 1.1
LINC00240-203ENST00000606878 CASZ1Q86V15 1759 aa21.94■■□□□ 1.1
LINC00240-203ENST00000606878 TRAPPC3LQ5T215 181 aa21.94■■□□□ 1.1
LINC00240-203ENST00000606878 ARXQ96QS3 562 aa21.94■■□□□ 1.1
LINC00240-203ENST00000606878 MAPK8IP3Q9UPT6 1336 aa21.94■■□□□ 1.1
LINC00240-203ENST00000606878 SCN11AQ9UI33 1791 aa21.92■■□□□ 1.1
LINC00240-203ENST00000606878 CNTNAP4Q9C0A0 1308 aa21.92■■□□□ 1.1
LINC00240-203ENST00000606878 RPS6KA4O75676 772 aa21.92■■□□□ 1.1
LINC00240-203ENST00000606878 WDR43Q15061 677 aaKnown RBP eCLIP21.92■■□□□ 1.1
LINC00240-203ENST00000606878 SMIM5Q71RC9 77 aa21.92■■□□□ 1.1
LINC00240-203ENST00000606878 MCM10Q7L590 875 aa21.92■■□□□ 1.1
LINC00240-203ENST00000606878 AMIGO3Q86WK7 504 aa21.92■■□□□ 1.1
LINC00240-203ENST00000606878 CEMIPQ8WUJ3 1361 aa21.91■■□□□ 1.1
LINC00240-203ENST00000606878 BTBD11A6QL63 1104 aa21.91■■□□□ 1.1
LINC00240-203ENST00000606878 NFE2L2Q16236 605 aa21.91■■□□□ 1.1
LINC00240-203ENST00000606878 ZNF790Q6PG37 636 aa21.91■■□□□ 1.1
LINC00240-203ENST00000606878 DNAJC10Q8IXB1 793 aa21.91■■□□□ 1.1
LINC00240-203ENST00000606878 VSIG10Q8N0Z9 540 aa21.91■■□□□ 1.1
LINC00240-203ENST00000606878 DCTN1Q14203 1278 aa21.9■■□□□ 1.1
LINC00240-203ENST00000606878 C5P01031 1676 aa21.9■■□□□ 1.1
LINC00240-203ENST00000606878 MRC1P22897 1456 aa21.9■■□□□ 1.1
LINC00240-203ENST00000606878 C4BP0C0L5 1744 aa21.89■■□□□ 1.1
LINC00240-203ENST00000606878 ADRA2BP18089 450 aa21.89■■□□□ 1.09
LINC00240-203ENST00000606878 CRKLP46109 303 aaKnown RBP21.89■■□□□ 1.09
LINC00240-203ENST00000606878 TAF7Q15545 349 aaPredicted RBP21.88■■□□□ 1.09
LINC00240-203ENST00000606878 MSL1Q68DK7 614 aa21.88■■□□□ 1.09
LINC00240-203ENST00000606878 TEX13AQ9BXU3 409 aaPredicted RBP21.88■■□□□ 1.09
LINC00240-203ENST00000606878 TAF1LQ8IZX4 1826 aa21.87■■□□□ 1.09
LINC00240-203ENST00000606878 STARD3NLO95772 234 aa21.87■■□□□ 1.09
LINC00240-203ENST00000606878 RFC4P35249 363 aa21.87■■□□□ 1.09
LINC00240-203ENST00000606878 INTS5Q6P9B9 1019 aaKnown RBP21.87■■□□□ 1.09
LINC00240-203ENST00000606878 ARHGEF1Q92888 912 aaKnown RBP21.87■■□□□ 1.09
LINC00240-203ENST00000606878 ZNF496Q96IT1 587 aaPredicted RBP21.87■■□□□ 1.09
LINC00240-203ENST00000606878 FMNL2Q96PY5 1086 aa21.87■■□□□ 1.09
LINC00240-203ENST00000606878 SYT17Q9BSW7 474 aa21.87■■□□□ 1.09
LINC00240-203ENST00000606878 FHDC1Q9C0D6 1143 aaPredicted RBP21.87■■□□□ 1.09
LINC00240-203ENST00000606878 ADAMTS8Q9UP79 889 aa21.87■■□□□ 1.09
LINC00240-203ENST00000606878 DCAF8L1A6NGE4 600 aa21.86■■□□□ 1.09
LINC00240-203ENST00000606878 CYP19A1P11511 503 aaPredicted RBP21.86■■□□□ 1.09
LINC00240-203ENST00000606878 CCDC87Q9NVE4 849 aa21.86■■□□□ 1.09
LINC00240-203ENST00000606878 QSER1Q2KHR3 1735 aa21.86■■□□□ 1.09
LINC00240-203ENST00000606878 ADAMTS7Q9UKP4 1686 aa21.85■■□□□ 1.09
LINC00240-203ENST00000606878 ANP32CO43423 234 aa21.85■■□□□ 1.09
LINC00240-203ENST00000606878 RIPK4P57078 832 aa21.85■■□□□ 1.09
LINC00240-203ENST00000606878 KCNQ3O43525 872 aa21.84■■□□□ 1.09
LINC00240-203ENST00000606878 NLGN1Q8N2Q7 840 aa21.84■■□□□ 1.09
LINC00240-203ENST00000606878 RUNDC1Q96C34 613 aa21.84■■□□□ 1.09
LINC00240-203ENST00000606878 ZNF831Q5JPB2 1677 aa21.83■■□□□ 1.09
LINC00240-203ENST00000606878 CCDC146Q8IYE0 955 aa21.83■■□□□ 1.09
LINC00240-203ENST00000606878 KLHL34Q8N239 644 aa21.83■■□□□ 1.09
LINC00240-203ENST00000606878 PNISRQ8TF01 805 aaKnown RBP21.83■■□□□ 1.09
LINC00240-203ENST00000606878 TMPOP42166 694 aaKnown RBP21.82■■□□□ 1.08
LINC00240-203ENST00000606878 HEG1Q9ULI3 1381 aa21.82■■□□□ 1.08
LINC00240-203ENST00000606878 LMOD3Q0VAK6 560 aa21.8■■□□□ 1.08
LINC00240-203ENST00000606878 MIS18AQ9NYP9 233 aa21.8■■□□□ 1.08
LINC00240-203ENST00000606878 TUBGCP6Q96RT7 1819 aa21.8■■□□□ 1.08
LINC00240-203ENST00000606878 SNRPA1P09661 255 aaKnown RBP21.79■■□□□ 1.08
LINC00240-203ENST00000606878 CANXP27824 592 aaKnown RBP21.79■■□□□ 1.08
LINC00240-203ENST00000606878 NEUROD2Q15784 382 aa21.79■■□□□ 1.08
LINC00240-203ENST00000606878 THUMPD2Q9BTF0 503 aaKnown RBP21.79■■□□□ 1.08
LINC00240-203ENST00000606878 KCPQ6ZWJ8 1503 aa21.79■■□□□ 1.08
LINC00240-203ENST00000606878 UBR3Q6ZT12 1888 aa21.78■■□□□ 1.08
LINC00240-203ENST00000606878 ZPR1O75312 459 aa21.78■■□□□ 1.08
LINC00240-203ENST00000606878 RRP7AQ9Y3A4 280 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms