RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 ITPK1Q13572 414 aa24.9■■□□□ 1.58
CCDC12-213ENST00000605875 GNPATO15228 680 aa24.89■■□□□ 1.58
CCDC12-213ENST00000605875 ATG3Q9NT62 314 aa24.89■■□□□ 1.58
CCDC12-213ENST00000605875 IGSF1Q8N6C5 1336 aa24.86■■□□□ 1.57
CCDC12-213ENST00000605875 PLEKHG2Q9H7P9 1386 aa24.86■■□□□ 1.57
CCDC12-213ENST00000605875 ATP10DQ9P241 1426 aa24.85■■□□□ 1.57
CCDC12-213ENST00000605875 ERVV-2B6SEH9 535 aa24.84■■□□□ 1.57
CCDC12-213ENST00000605875 WWC3Q9ULE0 1092 aa24.84■■□□□ 1.57
CCDC12-213ENST00000605875 PLEKHO1Q53GL0 409 aaPredicted RBP24.83■■□□□ 1.57
CCDC12-213ENST00000605875 HSP90AB1P08238 724 aaKnown RBP24.82■■□□□ 1.56
CCDC12-213ENST00000605875 DCAF5Q96JK2 942 aa24.82■■□□□ 1.56
CCDC12-213ENST00000605875 RBM42Q9BTD8 480 aaKnown RBP24.82■■□□□ 1.56
CCDC12-213ENST00000605875 KDRP35968 1356 aa24.81■■□□□ 1.56
CCDC12-213ENST00000605875 KNSTRNQ9Y448 316 aa24.81■■□□□ 1.56
CCDC12-213ENST00000605875 TRAPPC3LQ5T215 181 aa24.8■■□□□ 1.56
CCDC12-213ENST00000605875 SLC4A9Q96Q91 983 aa24.8■■□□□ 1.56
CCDC12-213ENST00000605875 GPBP1L1Q9HC44 474 aaPredicted RBP24.8■■□□□ 1.56
CCDC12-213ENST00000605875 RTCBQ9Y3I0 505 aaKnown RBP24.8■■□□□ 1.56
CCDC12-213ENST00000605875 MMP10P09238 476 aa24.79■■□□□ 1.56
CCDC12-213ENST00000605875 AMOTQ4VCS5 1084 aa24.79■■□□□ 1.56
CCDC12-213ENST00000605875 ZNF530Q6P9A1 599 aaPredicted RBP24.79■■□□□ 1.56
CCDC12-213ENST00000605875 MORC1Q86VD1 984 aa24.79■■□□□ 1.56
CCDC12-213ENST00000605875 ZNF831Q5JPB2 1677 aa24.78■■□□□ 1.56
CCDC12-213ENST00000605875 ADCY9O60503 1353 aa24.78■■□□□ 1.56
CCDC12-213ENST00000605875 CABP4P57796 275 aa24.77■■□□□ 1.56
CCDC12-213ENST00000605875 RC3H1Q5TC82 1133 aaKnown RBP24.77■■□□□ 1.56
CCDC12-213ENST00000605875 NLGN1Q8N2Q7 840 aa24.76■■□□□ 1.55
CCDC12-213ENST00000605875 ZNF526Q8TF50 670 aaPredicted RBP24.76■■□□□ 1.55
CCDC12-213ENST00000605875 KDM6AO15550 1401 aaPredicted RBP24.76■■□□□ 1.55
CCDC12-213ENST00000605875 AMER1Q5JTC6 1135 aaPredicted RBP24.75■■□□□ 1.55
CCDC12-213ENST00000605875 ARHGEF1Q92888 912 aaKnown RBP24.75■■□□□ 1.55
CCDC12-213ENST00000605875 COL5A3P25940 1745 aaPredicted RBP24.75■■□□□ 1.55
CCDC12-213ENST00000605875 ADRA2BP18089 450 aa24.74■■□□□ 1.55
CCDC12-213ENST00000605875 MTHFSP49914 203 aa24.74■■□□□ 1.55
CCDC12-213ENST00000605875 C1orf141Q5JVX7 400 aa24.74■■□□□ 1.55
CCDC12-213ENST00000605875 AEBP1Q8IUX7 1158 aa24.74■■□□□ 1.55
CCDC12-213ENST00000605875 CNTNAP4Q9C0A0 1308 aa24.74■■□□□ 1.55
CCDC12-213ENST00000605875 KIF13BQ9NQT8 1826 aa24.73■■□□□ 1.55
CCDC12-213ENST00000605875 RPS6KA4O75676 772 aa24.73■■□□□ 1.55
CCDC12-213ENST00000605875 CICQ96RK0 1608 aaPredicted RBP24.72■■□□□ 1.55
CCDC12-213ENST00000605875 RFC4P35249 363 aa24.72■■□□□ 1.55
CCDC12-213ENST00000605875 TGFB2P61812 414 aa24.71■■□□□ 1.55
CCDC12-213ENST00000605875 SULT6B1Q6IMI4 303 aa24.71■■□□□ 1.55
CCDC12-213ENST00000605875 N4BP2Q86UW6 1770 aaPredicted RBP24.71■■□□□ 1.55
CCDC12-213ENST00000605875 PXDNLA1KZ92 1463 aa24.7■■□□□ 1.55
CCDC12-213ENST00000605875 PTCD1O75127 700 aaKnown RBP24.7■■□□□ 1.54
CCDC12-213ENST00000605875 GYS1P13807 737 aa24.7■■□□□ 1.54
CCDC12-213ENST00000605875 MYH14Q7Z406 1995 aaKnown RBP24.7■■□□□ 1.54
CCDC12-213ENST00000605875 KIAA1551Q9HCM1 1747 aa24.69■■□□□ 1.54
CCDC12-213ENST00000605875 NFATC2IPQ8NCF5 419 aa24.69■■□□□ 1.54
CCDC12-213ENST00000605875 CCDC87Q9NVE4 849 aa24.69■■□□□ 1.54
CCDC12-213ENST00000605875 A0A0G2JLW4 131 aa24.68■■□□□ 1.54
CCDC12-213ENST00000605875 PARP3Q9Y6F1 533 aa24.68■■□□□ 1.54
CCDC12-213ENST00000605875 C10orf71Q711Q0 1435 aa24.68■■□□□ 1.54
CCDC12-213ENST00000605875 C4AP0C0L4 1744 aa24.67■■□□□ 1.54
CCDC12-213ENST00000605875 IL13P35225 146 aa24.67■■□□□ 1.54
CCDC12-213ENST00000605875 BCS1LQ9Y276 419 aa24.67■■□□□ 1.54
CCDC12-213ENST00000605875 PER1O15534 1290 aaPredicted RBP24.66■■□□□ 1.54
CCDC12-213ENST00000605875 CRKLP46109 303 aaKnown RBP24.66■■□□□ 1.54
CCDC12-213ENST00000605875 CC2D1BQ5T0F9 858 aaKnown RBP24.66■■□□□ 1.54
CCDC12-213ENST00000605875 DPEP1P16444 411 aa24.64■■□□□ 1.54
CCDC12-213ENST00000605875 SCN11AQ9UI33 1791 aa24.63■■□□□ 1.53
CCDC12-213ENST00000605875 HSPA6P17066 643 aa24.62■■□□□ 1.53
CCDC12-213ENST00000605875 CNGB1Q14028 1251 aaPredicted RBP24.62■■□□□ 1.53
CCDC12-213ENST00000605875 ARHGAP27Q6ZUM4 889 aa24.62■■□□□ 1.53
CCDC12-213ENST00000605875 SRP68Q9UHB9 627 aaKnown RBP24.62■■□□□ 1.53
CCDC12-213ENST00000605875 TJP1Q07157 1748 aa24.61■■□□□ 1.53
CCDC12-213ENST00000605875 FCHSD2O94868 740 aa24.61■■□□□ 1.53
CCDC12-213ENST00000605875 AKAP4Q5JQC9 854 aa24.61■■□□□ 1.53
CCDC12-213ENST00000605875 NPC1L1Q9UHC9 1359 aa24.6■■□□□ 1.53
CCDC12-213ENST00000605875 KIF3CO14782 793 aa24.6■■□□□ 1.53
CCDC12-213ENST00000605875 FKBP8Q14318 412 aa24.59■■□□□ 1.53
CCDC12-213ENST00000605875 BRCA1P38398 1863 aaKnown RBP24.59■■□□□ 1.53
CCDC12-213ENST00000605875 USP42Q9H9J4 1324 aaKnown RBP24.59■■□□□ 1.53
CCDC12-213ENST00000605875 INTS5Q6P9B9 1019 aaKnown RBP24.58■■□□□ 1.53
CCDC12-213ENST00000605875 SLC52A2Q9HAB3 445 aa24.58■■□□□ 1.53
CCDC12-213ENST00000605875 LGR6Q9HBX8 967 aa24.58■■□□□ 1.53
CCDC12-213ENST00000605875 KCNA3P22001 575 aa24.57■■□□□ 1.52
CCDC12-213ENST00000605875 HMOX1P09601 288 aa24.56■■□□□ 1.52
CCDC12-213ENST00000605875 PIM2Q9P1W9 311 aa24.56■■□□□ 1.52
CCDC12-213ENST00000605875 COL3A1P02461 1466 aaPredicted RBP24.56■■□□□ 1.52
CCDC12-213ENST00000605875 RNMTO43148 476 aaKnown RBP24.55■■□□□ 1.52
CCDC12-213ENST00000605875 DDR1Q08345 913 aa24.55■■□□□ 1.52
CCDC12-213ENST00000605875 DNAJC10Q8IXB1 793 aa24.55■■□□□ 1.52
CCDC12-213ENST00000605875 VIRMAQ69YN4 1812 aaKnown RBP24.54■■□□□ 1.52
CCDC12-213ENST00000605875 CEP350Q5VT06 3117 aa24.54■■□□□ 1.52
CCDC12-213ENST00000605875 ARFGEF1Q9Y6D6 1849 aa24.54■■□□□ 1.52
CCDC12-213ENST00000605875 ZPR1O75312 459 aa24.53■■□□□ 1.52
CCDC12-213ENST00000605875 SLC39A6Q13433 755 aa24.53■■□□□ 1.52
CCDC12-213ENST00000605875 ADAMTS7Q9UKP4 1686 aa24.53■■□□□ 1.52
CCDC12-213ENST00000605875 POLRMTO00411 1230 aaKnown RBP24.51■■□□□ 1.51
CCDC12-213ENST00000605875 TM4SF1P30408 202 aa24.51■■□□□ 1.51
CCDC12-213ENST00000605875 MTHFSDQ2M296 383 aaKnown RBP24.51■■□□□ 1.51
CCDC12-213ENST00000605875 DALRD3Q5D0E6 543 aaKnown RBP24.51■■□□□ 1.51
CCDC12-213ENST00000605875 USPL1Q5W0Q7 1092 aa24.51■■□□□ 1.51
CCDC12-213ENST00000605875 MRC1P22897 1456 aa24.51■■□□□ 1.51
CCDC12-213ENST00000605875 DIAPH1O60610 1272 aaKnown RBP24.5■■□□□ 1.51
CCDC12-213ENST00000605875 CYP19A1P11511 503 aaPredicted RBP24.5■■□□□ 1.51
CCDC12-213ENST00000605875 C9orf131Q5VYM1 1079 aa24.5■■□□□ 1.51
CCDC12-213ENST00000605875 SOS1Q07889 1333 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms