RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 ITPK1Q13572 414 aa24.43■■□□□ 1.5
CCDC12-212ENST00000605358 AMOTQ4VCS5 1084 aa24.43■■□□□ 1.5
CCDC12-212ENST00000605358 PLEKHO1Q53GL0 409 aaPredicted RBP24.43■■□□□ 1.5
CCDC12-212ENST00000605358 RC3H1Q5TC82 1133 aaKnown RBP24.41■■□□□ 1.5
CCDC12-212ENST00000605358 POLR3GLQ9BT43 218 aa24.41■■□□□ 1.5
CCDC12-212ENST00000605358 ADRA2BP18089 450 aa24.4■■□□□ 1.5
CCDC12-212ENST00000605358 TNNT2P45379 298 aaPredicted RBP24.4■■□□□ 1.5
CCDC12-212ENST00000605358 PANK3Q9H999 370 aa24.4■■□□□ 1.5
CCDC12-212ENST00000605358 RTCBQ9Y3I0 505 aaKnown RBP24.4■■□□□ 1.5
CCDC12-212ENST00000605358 ATP10DQ9P241 1426 aa24.39■■□□□ 1.5
CCDC12-212ENST00000605358 TRAPPC3LQ5T215 181 aa24.39■■□□□ 1.49
CCDC12-212ENST00000605358 NLGN1Q8N2Q7 840 aa24.39■■□□□ 1.49
CCDC12-212ENST00000605358 KDRP35968 1356 aa24.39■■□□□ 1.49
CCDC12-212ENST00000605358 ADCY9O60503 1353 aa24.38■■□□□ 1.49
CCDC12-212ENST00000605358 GPBP1L1Q9HC44 474 aaPredicted RBP24.37■■□□□ 1.49
CCDC12-212ENST00000605358 TGFB2P61812 414 aa24.36■■□□□ 1.49
CCDC12-212ENST00000605358 SMIM5Q71RC9 77 aa24.36■■□□□ 1.49
CCDC12-212ENST00000605358 PCGF6Q9BYE7 350 aa24.36■■□□□ 1.49
CCDC12-212ENST00000605358 CNTNAP4Q9C0A0 1308 aa24.35■■□□□ 1.49
CCDC12-212ENST00000605358 HSPA5P11021 654 aaKnown RBP24.35■■□□□ 1.49
CCDC12-212ENST00000605358 KIF13BQ9NQT8 1826 aa24.34■■□□□ 1.49
CCDC12-212ENST00000605358 MMP10P09238 476 aa24.34■■□□□ 1.49
CCDC12-212ENST00000605358 CABP4P57796 275 aa24.34■■□□□ 1.49
CCDC12-212ENST00000605358 RPS6KA4O75676 772 aa24.33■■□□□ 1.49
CCDC12-212ENST00000605358 ZNF530Q6P9A1 599 aaPredicted RBP24.33■■□□□ 1.49
CCDC12-212ENST00000605358 MORC1Q86VD1 984 aa24.33■■□□□ 1.49
CCDC12-212ENST00000605358 RBM42Q9BTD8 480 aaKnown RBP24.33■■□□□ 1.49
CCDC12-212ENST00000605358 MTHFSP49914 203 aa24.32■■□□□ 1.48
CCDC12-212ENST00000605358 C1orf141Q5JVX7 400 aa24.32■■□□□ 1.48
CCDC12-212ENST00000605358 SLC4A9Q96Q91 983 aa24.32■■□□□ 1.48
CCDC12-212ENST00000605358 COL5A3P25940 1745 aaPredicted RBP24.31■■□□□ 1.48
CCDC12-212ENST00000605358 ARHGEF1Q92888 912 aaKnown RBP24.31■■□□□ 1.48
CCDC12-212ENST00000605358 RFC4P35249 363 aa24.3■■□□□ 1.48
CCDC12-212ENST00000605358 KNSTRNQ9Y448 316 aa24.3■■□□□ 1.48
CCDC12-212ENST00000605358 CICQ96RK0 1608 aaPredicted RBP24.3■■□□□ 1.48
CCDC12-212ENST00000605358 KDM6AO15550 1401 aaPredicted RBP24.29■■□□□ 1.48
CCDC12-212ENST00000605358 CCDC87Q9NVE4 849 aa24.28■■□□□ 1.48
CCDC12-212ENST00000605358 GYS1P13807 737 aa24.27■■□□□ 1.48
CCDC12-212ENST00000605358 C10orf71Q711Q0 1435 aa24.27■■□□□ 1.48
CCDC12-212ENST00000605358 PXDNLA1KZ92 1463 aa24.26■■□□□ 1.47
CCDC12-212ENST00000605358 PARP3Q9Y6F1 533 aa24.26■■□□□ 1.47
CCDC12-212ENST00000605358 CEP350Q5VT06 3117 aa24.25■■□□□ 1.47
CCDC12-212ENST00000605358 SULT6B1Q6IMI4 303 aa24.25■■□□□ 1.47
CCDC12-212ENST00000605358 NFATC2IPQ8NCF5 419 aa24.25■■□□□ 1.47
CCDC12-212ENST00000605358 MYH14Q7Z406 1995 aaKnown RBP24.25■■□□□ 1.47
CCDC12-212ENST00000605358 IL13P35225 146 aa24.24■■□□□ 1.47
CCDC12-212ENST00000605358 AEBP1Q8IUX7 1158 aa24.24■■□□□ 1.47
CCDC12-212ENST00000605358 C4AP0C0L4 1744 aa24.24■■□□□ 1.47
CCDC12-212ENST00000605358 KIAA1551Q9HCM1 1747 aa24.24■■□□□ 1.47
CCDC12-212ENST00000605358 PTCD1O75127 700 aaKnown RBP24.22■■□□□ 1.47
CCDC12-212ENST00000605358 HSPA6P17066 643 aa24.22■■□□□ 1.47
CCDC12-212ENST00000605358 AKAP4Q5JQC9 854 aa24.22■■□□□ 1.47
CCDC12-212ENST00000605358 A0A0G2JLW4 131 aa24.21■■□□□ 1.47
CCDC12-212ENST00000605358 CRKLP46109 303 aaKnown RBP24.21■■□□□ 1.47
CCDC12-212ENST00000605358 WWC3Q9ULE0 1092 aa24.21■■□□□ 1.47
CCDC12-212ENST00000605358 BCS1LQ9Y276 419 aa24.21■■□□□ 1.47
CCDC12-212ENST00000605358 SCN11AQ9UI33 1791 aa24.21■■□□□ 1.47
CCDC12-212ENST00000605358 ZNF526Q8TF50 670 aaPredicted RBP24.2■■□□□ 1.46
CCDC12-212ENST00000605358 N4BP2Q86UW6 1770 aaPredicted RBP24.2■■□□□ 1.46
CCDC12-212ENST00000605358 AMER1Q5JTC6 1135 aaPredicted RBP24.19■■□□□ 1.46
CCDC12-212ENST00000605358 DPEP1P16444 411 aa24.18■■□□□ 1.46
CCDC12-212ENST00000605358 BRCA1P38398 1863 aaKnown RBP24.17■■□□□ 1.46
CCDC12-212ENST00000605358 USP42Q9H9J4 1324 aaKnown RBP24.17■■□□□ 1.46
CCDC12-212ENST00000605358 KIF3CO14782 793 aa24.17■■□□□ 1.46
CCDC12-212ENST00000605358 CCER1Q8TC90 406 aaPredicted RBP24.17■■□□□ 1.46
CCDC12-212ENST00000605358 SLC52A2Q9HAB3 445 aa24.17■■□□□ 1.46
CCDC12-212ENST00000605358 FCHSD2O94868 740 aa24.16■■□□□ 1.46
CCDC12-212ENST00000605358 PIM2Q9P1W9 311 aa24.16■■□□□ 1.46
CCDC12-212ENST00000605358 ARHGAP27Q6ZUM4 889 aa24.15■■□□□ 1.46
CCDC12-212ENST00000605358 TJP1Q07157 1748 aa24.15■■□□□ 1.46
CCDC12-212ENST00000605358 ARFGEF1Q9Y6D6 1849 aa24.14■■□□□ 1.46
CCDC12-212ENST00000605358 KCNA3P22001 575 aa24.14■■□□□ 1.45
CCDC12-212ENST00000605358 INTS5Q6P9B9 1019 aaKnown RBP24.14■■□□□ 1.45
CCDC12-212ENST00000605358 ZPR1O75312 459 aa24.12■■□□□ 1.45
CCDC12-212ENST00000605358 TOMM70O94826 608 aa24.12■■□□□ 1.45
CCDC12-212ENST00000605358 TM4SF1P30408 202 aa24.12■■□□□ 1.45
CCDC12-212ENST00000605358 FKBP8Q14318 412 aa24.12■■□□□ 1.45
CCDC12-212ENST00000605358 VSIG10Q8N0Z9 540 aa24.12■■□□□ 1.45
CCDC12-212ENST00000605358 MRC1P22897 1456 aa24.12■■□□□ 1.45
CCDC12-212ENST00000605358 RNMTO43148 476 aaKnown RBP24.11■■□□□ 1.45
CCDC12-212ENST00000605358 DALRD3Q5D0E6 543 aaKnown RBP24.11■■□□□ 1.45
CCDC12-212ENST00000605358 SRP68Q9UHB9 627 aaKnown RBP24.11■■□□□ 1.45
CCDC12-212ENST00000605358 LGR6Q9HBX8 967 aa24.1■■□□□ 1.45
CCDC12-212ENST00000605358 KIF7Q2M1P5 1343 aa24.1■■□□□ 1.45
CCDC12-212ENST00000605358 ADAMTS7Q9UKP4 1686 aa24.09■■□□□ 1.45
CCDC12-212ENST00000605358 PER1O15534 1290 aaPredicted RBP24.09■■□□□ 1.45
CCDC12-212ENST00000605358 DDR1Q08345 913 aa24.09■■□□□ 1.45
CCDC12-212ENST00000605358 SOS1Q07889 1333 aaPredicted RBP24.09■■□□□ 1.45
CCDC12-212ENST00000605358 POLRMTO00411 1230 aaKnown RBP24.08■■□□□ 1.45
CCDC12-212ENST00000605358 DIAPH1O60610 1272 aaKnown RBP24.08■■□□□ 1.45
CCDC12-212ENST00000605358 CYP19A1P11511 503 aaPredicted RBP24.08■■□□□ 1.45
CCDC12-212ENST00000605358 DNAJC10Q8IXB1 793 aa24.08■■□□□ 1.45
CCDC12-212ENST00000605358 APLP1P51693 650 aa24.07■■□□□ 1.44
CCDC12-212ENST00000605358 IFFO2Q5TF58 517 aa24.07■■□□□ 1.44
CCDC12-212ENST00000605358 NARFQ9UHQ1 456 aa24.07■■□□□ 1.44
CCDC12-212ENST00000605358 VIRMAQ69YN4 1812 aaKnown RBP24.06■■□□□ 1.44
CCDC12-212ENST00000605358 NPC1L1Q9UHC9 1359 aa24.05■■□□□ 1.44
CCDC12-212ENST00000605358 HMOX1P09601 288 aa24.05■■□□□ 1.44
CCDC12-212ENST00000605358 MTHFSDQ2M296 383 aaKnown RBP24.05■■□□□ 1.44
CCDC12-212ENST00000605358 C9orf131Q5VYM1 1079 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms