RNA–Protein interactions for RNA: ENST00000602728.1

SPCS1-205, Transcript of signal peptidase complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS1, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-205ENST00000602728 CGNL1Q0VF96 1302 aa13.73□□□□□ -0.21
SPCS1-205ENST00000602728 PLSCR1O15162 318 aa13.73□□□□□ -0.21
SPCS1-205ENST00000602728 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
SPCS1-205ENST00000602728 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
SPCS1-205ENST00000602728 PCDHB13Q9Y5F0 798 aa13.73□□□□□ -0.21
SPCS1-205ENST00000602728 KIF24Q5T7B8 1368 aa13.72□□□□□ -0.21
SPCS1-205ENST00000602728 PPM1GO15355 546 aaPredicted RBP13.72□□□□□ -0.21
SPCS1-205ENST00000602728 TNNT2P45379 298 aaPredicted RBP13.72□□□□□ -0.21
SPCS1-205ENST00000602728 TXNRD1Q16881 649 aa13.72□□□□□ -0.21
SPCS1-205ENST00000602728 POTEJP0CG39 1038 aa13.71□□□□□ -0.21
SPCS1-205ENST00000602728 NBPF14Q5TI25 921 aa13.71□□□□□ -0.21
SPCS1-205ENST00000602728 PANK3Q9H999 370 aa13.7□□□□□ -0.22
SPCS1-205ENST00000602728 COL24A1Q17RW2 1714 aa13.7□□□□□ -0.22
SPCS1-205ENST00000602728 KIF7Q2M1P5 1343 aa13.69□□□□□ -0.22
SPCS1-205ENST00000602728 ZCRB1Q8TBF4 217 aaKnown RBP13.69□□□□□ -0.22
SPCS1-205ENST00000602728 SYTL4Q96C24 671 aaPredicted RBP13.69□□□□□ -0.22
SPCS1-205ENST00000602728 SGIP1Q9BQI5 828 aa13.69□□□□□ -0.22
SPCS1-205ENST00000602728 TTLL13PA6NNM8 815 aa13.68□□□□□ -0.22
SPCS1-205ENST00000602728 KCNQ4P56696 695 aa13.68□□□□□ -0.22
SPCS1-205ENST00000602728 ZNF827Q17R98 1081 aa13.68□□□□□ -0.22
SPCS1-205ENST00000602728 PLSCR2Q9NRY7 297 aa13.68□□□□□ -0.22
SPCS1-205ENST00000602728 RAPGEF4Q8WZA2 1011 aa13.67□□□□□ -0.22
SPCS1-205ENST00000602728 LRRC4BQ9NT99 713 aa13.67□□□□□ -0.22
SPCS1-205ENST00000602728 POLKQ9UBT6 870 aa13.67□□□□□ -0.22
SPCS1-205ENST00000602728 UBR3Q6ZT12 1888 aa13.66□□□□□ -0.22
SPCS1-205ENST00000602728 ZBTB7AO95365 584 aa13.66□□□□□ -0.22
SPCS1-205ENST00000602728 TATP17735 454 aaPredicted RBP13.66□□□□□ -0.22
SPCS1-205ENST00000602728 PRIM1P49642 420 aaKnown RBP13.66□□□□□ -0.22
SPCS1-205ENST00000602728 C4BP0C0L5 1744 aa13.66□□□□□ -0.22
SPCS1-205ENST00000602728 WASHC2AQ641Q2 1341 aa13.65□□□□□ -0.22
SPCS1-205ENST00000602728 PCDH11XQ9BZA7 1347 aa13.65□□□□□ -0.22
SPCS1-205ENST00000602728 PCDH11YQ9BZA8 1340 aa13.65□□□□□ -0.22
SPCS1-205ENST00000602728 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
SPCS1-205ENST00000602728 STK32BQ9NY57 414 aa13.65□□□□□ -0.22
SPCS1-205ENST00000602728 SCN11AQ9UI33 1791 aa13.64□□□□□ -0.23
SPCS1-205ENST00000602728 CYP27B1O15528 508 aa13.64□□□□□ -0.23
SPCS1-205ENST00000602728 EIF4A2Q14240 407 aaKnown RBP13.64□□□□□ -0.23
SPCS1-205ENST00000602728 SLC15A2Q16348 729 aa13.64□□□□□ -0.23
SPCS1-205ENST00000602728 DCAF8Q5TAQ9 597 aa13.64□□□□□ -0.23
SPCS1-205ENST00000602728 IFNL1Q8IU54 200 aa13.64□□□□□ -0.23
SPCS1-205ENST00000602728 EYA1Q99502 592 aa13.64□□□□□ -0.23
SPCS1-205ENST00000602728 MAMSTRQ6ZN01 415 aa13.63□□□□□ -0.23
SPCS1-205ENST00000602728 COL5A3P25940 1745 aaPredicted RBP13.63□□□□□ -0.23
SPCS1-205ENST00000602728 SPON1Q9HCB6 807 aa13.62□□□□□ -0.23
SPCS1-205ENST00000602728 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
SPCS1-205ENST00000602728 IGSF1Q8N6C5 1336 aa13.61□□□□□ -0.23
SPCS1-205ENST00000602728 PALLDQ8WX93 1383 aa13.6□□□□□ -0.23
SPCS1-205ENST00000602728 MORC1Q86VD1 984 aa13.6□□□□□ -0.23
SPCS1-205ENST00000602728 PPP1R1BQ9UD71 204 aaPredicted RBP13.6□□□□□ -0.23
SPCS1-205ENST00000602728 TJP1Q07157 1748 aa13.59□□□□□ -0.23
SPCS1-205ENST00000602728 PTGER2P43116 358 aa13.59□□□□□ -0.23
SPCS1-205ENST00000602728 AMER1Q5JTC6 1135 aaPredicted RBP13.59□□□□□ -0.23
SPCS1-205ENST00000602728 AEBP1Q8IUX7 1158 aa13.59□□□□□ -0.23
SPCS1-205ENST00000602728 COL3A1P02461 1466 aaPredicted RBP13.59□□□□□ -0.23
SPCS1-205ENST00000602728 PNPLA7Q6ZV29 1317 aa13.59□□□□□ -0.23
SPCS1-205ENST00000602728 C4AP0C0L4 1744 aa13.59□□□□□ -0.23
SPCS1-205ENST00000602728 KDM6AO15550 1401 aaPredicted RBP13.58□□□□□ -0.24
SPCS1-205ENST00000602728 SEC24BO95487 1268 aa13.58□□□□□ -0.24
SPCS1-205ENST00000602728 VASPP50552 380 aaPredicted RBP13.58□□□□□ -0.24
SPCS1-205ENST00000602728 CNGB1Q14028 1251 aaPredicted RBP13.58□□□□□ -0.24
SPCS1-205ENST00000602728 CCNL1Q9UK58 526 aaPredicted RBP13.58□□□□□ -0.24
SPCS1-205ENST00000602728 KNSTRNQ9Y448 316 aa13.58□□□□□ -0.24
SPCS1-205ENST00000602728 ZNF831Q5JPB2 1677 aa13.57□□□□□ -0.24
SPCS1-205ENST00000602728 PYGBP11216 843 aa13.57□□□□□ -0.24
SPCS1-205ENST00000602728 SLC27A3Q5K4L6 730 aa13.57□□□□□ -0.24
SPCS1-205ENST00000602728 MPRIPQ6WCQ1 1025 aa13.57□□□□□ -0.24
SPCS1-205ENST00000602728 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
SPCS1-205ENST00000602728 SCUBE2Q9NQ36 999 aa13.57□□□□□ -0.24
SPCS1-205ENST00000602728 COLQQ9Y215 455 aaPredicted RBP13.57□□□□□ -0.24
SPCS1-205ENST00000602728 MTFR1LQ9H019 292 aa13.56□□□□□ -0.24
SPCS1-205ENST00000602728 CICQ96RK0 1608 aaPredicted RBP13.55□□□□□ -0.24
SPCS1-205ENST00000602728 PHKG2P15735 406 aa13.55□□□□□ -0.24
SPCS1-205ENST00000602728 CC2D1BQ5T0F9 858 aaKnown RBP13.55□□□□□ -0.24
SPCS1-205ENST00000602728 TMEM106CQ9BVX2 250 aa13.55□□□□□ -0.24
SPCS1-205ENST00000602728 SPG7Q9UQ90 795 aa13.55□□□□□ -0.24
SPCS1-205ENST00000602728 ADAMTS7Q9UKP4 1686 aa13.55□□□□□ -0.24
SPCS1-205ENST00000602728 PIGBQ92521 554 aa13.54□□□□□ -0.24
SPCS1-205ENST00000602728 SIPA1L3O60292 1781 aaPredicted RBP13.53□□□□□ -0.24
SPCS1-205ENST00000602728 CHD4Q14839 1912 aa13.53□□□□□ -0.24
SPCS1-205ENST00000602728 MYH14Q7Z406 1995 aaKnown RBP13.53□□□□□ -0.24
SPCS1-205ENST00000602728 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
SPCS1-205ENST00000602728 AMIGO3Q86WK7 504 aa13.53□□□□□ -0.24
SPCS1-205ENST00000602728 TFCP2L1Q9NZI6 479 aa13.53□□□□□ -0.24
SPCS1-205ENST00000602728 KDRP35968 1356 aa13.53□□□□□ -0.24
SPCS1-205ENST00000602728 PER1O15534 1290 aaPredicted RBP13.52□□□□□ -0.25
SPCS1-205ENST00000602728 IER5LQ5T953 404 aa13.52□□□□□ -0.25
SPCS1-205ENST00000602728 ZNF530Q6P9A1 599 aaPredicted RBP13.52□□□□□ -0.25
SPCS1-205ENST00000602728 SMIM5Q71RC9 77 aa13.52□□□□□ -0.25
SPCS1-205ENST00000602728 FHDC1Q9C0D6 1143 aaPredicted RBP13.52□□□□□ -0.25
SPCS1-205ENST00000602728 PLEKHG2Q9H7P9 1386 aa13.52□□□□□ -0.25
SPCS1-205ENST00000602728 UBR2Q8IWV8 1755 aa13.52□□□□□ -0.25
SPCS1-205ENST00000602728 MRC1P22897 1456 aa13.51□□□□□ -0.25
SPCS1-205ENST00000602728 IL13P35225 146 aa13.51□□□□□ -0.25
SPCS1-205ENST00000602728 MSL1Q68DK7 614 aa13.51□□□□□ -0.25
SPCS1-205ENST00000602728 SULT6B1Q6IMI4 303 aa13.51□□□□□ -0.25
SPCS1-205ENST00000602728 IFNL2Q8IZJ0 200 aa13.51□□□□□ -0.25
SPCS1-205ENST00000602728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.25
SPCS1-205ENST00000602728 TMOD3Q9NYL9 352 aa13.51□□□□□ -0.25
SPCS1-205ENST00000602728 MTHFSP49914 203 aa13.5□□□□□ -0.25
SPCS1-205ENST00000602728 COL23A1Q86Y22 540 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms