RNA–Protein interactions for RNA: ENST00000602582.5

TRIM11-206, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 682 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-206ENST00000602582 ITGB4P16144 1822 aa19.61■□□□□ 0.73
TRIM11-206ENST00000602582 LY75O60449 1722 aa19.6■□□□□ 0.73
TRIM11-206ENST00000602582 NEFMP07197 916 aa19.6■□□□□ 0.73
TRIM11-206ENST00000602582 HMOX1P09601 288 aa19.6■□□□□ 0.73
TRIM11-206ENST00000602582 RIPK4P57078 832 aa19.6■□□□□ 0.73
TRIM11-206ENST00000602582 R3HDM1Q15032 1099 aaKnown RBP19.6■□□□□ 0.73
TRIM11-206ENST00000602582 CCDC136Q96JN2 1154 aa19.6■□□□□ 0.73
TRIM11-206ENST00000602582 PAPPAQ13219 1627 aa19.6■□□□□ 0.73
TRIM11-206ENST00000602582 PRIM1P49642 420 aaKnown RBP19.59■□□□□ 0.73
TRIM11-206ENST00000602582 NFE2L2Q16236 605 aa19.59■□□□□ 0.73
TRIM11-206ENST00000602582 TXNRD1Q16881 649 aa19.59■□□□□ 0.73
TRIM11-206ENST00000602582 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.59■□□□□ 0.73
TRIM11-206ENST00000602582 LRP5O75197 1615 aa19.58■□□□□ 0.73
TRIM11-206ENST00000602582 KDRP35968 1356 aa19.58■□□□□ 0.73
TRIM11-206ENST00000602582 AEBP1Q8IUX7 1158 aa19.58■□□□□ 0.72
TRIM11-206ENST00000602582 CRBNQ96SW2 442 aa19.58■□□□□ 0.72
TRIM11-206ENST00000602582 SPG7Q9UQ90 795 aa19.58■□□□□ 0.72
TRIM11-206ENST00000602582 SYTL4Q96C24 671 aaPredicted RBP19.57■□□□□ 0.72
TRIM11-206ENST00000602582 ANO8Q9HCE9 1232 aaPredicted RBP19.57■□□□□ 0.72
TRIM11-206ENST00000602582 TSHZ2Q9NRE2 1034 aa19.57■□□□□ 0.72
TRIM11-206ENST00000602582 FANCIQ9NVI1 1328 aa19.56■□□□□ 0.72
TRIM11-206ENST00000602582 NBPF14Q5TI25 921 aa19.56■□□□□ 0.72
TRIM11-206ENST00000602582 PHACTR3Q96KR7 559 aa19.56■□□□□ 0.72
TRIM11-206ENST00000602582 NKX1-1Q15270 411 aaPredicted RBP19.55■□□□□ 0.72
TRIM11-206ENST00000602582 C20orf194Q5TEA3 1177 aa19.55■□□□□ 0.72
TRIM11-206ENST00000602582 BCAR3O75815 825 aa19.54■□□□□ 0.72
TRIM11-206ENST00000602582 CT47B1P0C2W7 299 aaPredicted RBP19.54■□□□□ 0.72
TRIM11-206ENST00000602582 SULT6B1Q6IMI4 303 aa19.54■□□□□ 0.72
TRIM11-206ENST00000602582 CASZ1Q86V15 1759 aa19.54■□□□□ 0.72
TRIM11-206ENST00000602582 PHKG2P15735 406 aa19.53■□□□□ 0.72
TRIM11-206ENST00000602582 RARSP54136 660 aaKnown RBP19.52■□□□□ 0.72
TRIM11-206ENST00000602582 IFNL2Q8IZJ0 200 aa19.52■□□□□ 0.72
TRIM11-206ENST00000602582 LMOD3Q0VAK6 560 aa19.51■□□□□ 0.71
TRIM11-206ENST00000602582 LRRC4BQ9NT99 713 aa19.51■□□□□ 0.71
TRIM11-206ENST00000602582 CALD1Q05682 793 aaKnown RBP19.5■□□□□ 0.71
TRIM11-206ENST00000602582 PLEKHO1Q53GL0 409 aaPredicted RBP19.5■□□□□ 0.71
TRIM11-206ENST00000602582 TSR2Q969E8 191 aaKnown RBP19.5■□□□□ 0.71
TRIM11-206ENST00000602582 TUBGCP6Q96RT7 1819 aa19.49■□□□□ 0.71
TRIM11-206ENST00000602582 AMOTQ4VCS5 1084 aa19.49■□□□□ 0.71
TRIM11-206ENST00000602582 SLC27A3Q5K4L6 730 aa19.49■□□□□ 0.71
TRIM11-206ENST00000602582 MPRIPQ6WCQ1 1025 aa19.49■□□□□ 0.71
TRIM11-206ENST00000602582 QSER1Q2KHR3 1735 aa19.48■□□□□ 0.71
TRIM11-206ENST00000602582 PDE3AQ14432 1141 aa19.48■□□□□ 0.71
TRIM11-206ENST00000602582 ZNF530Q6P9A1 599 aaPredicted RBP19.48■□□□□ 0.71
TRIM11-206ENST00000602582 KDM6AO15550 1401 aaPredicted RBP19.48■□□□□ 0.71
TRIM11-206ENST00000602582 VIRMAQ69YN4 1812 aaKnown RBP19.48■□□□□ 0.71
TRIM11-206ENST00000602582 TAF1LQ8IZX4 1826 aa19.48■□□□□ 0.71
TRIM11-206ENST00000602582 SCN11AQ9UI33 1791 aa19.47■□□□□ 0.71
TRIM11-206ENST00000602582 C5P01031 1676 aa19.47■□□□□ 0.71
TRIM11-206ENST00000602582 EXOSC9Q06265 439 aaKnown RBP19.47■□□□□ 0.71
TRIM11-206ENST00000602582 KCNQ4P56696 695 aa19.46■□□□□ 0.71
TRIM11-206ENST00000602582 SLC15A2Q16348 729 aa19.46■□□□□ 0.71
TRIM11-206ENST00000602582 PIGBQ92521 554 aa19.46■□□□□ 0.71
TRIM11-206ENST00000602582 STK32BQ9NY57 414 aa19.46■□□□□ 0.71
TRIM11-206ENST00000602582 PALLDQ8WX93 1383 aa19.45■□□□□ 0.7
TRIM11-206ENST00000602582 DLG5Q8TDM6 1919 aa19.45■□□□□ 0.7
TRIM11-206ENST00000602582 ZNF827Q17R98 1081 aa19.45■□□□□ 0.7
TRIM11-206ENST00000602582 IFT57Q9NWB7 429 aa19.45■□□□□ 0.7
TRIM11-206ENST00000602582 HSP90AB1P08238 724 aaKnown RBP19.44■□□□□ 0.7
TRIM11-206ENST00000602582 CANXP27824 592 aaKnown RBP19.44■□□□□ 0.7
TRIM11-206ENST00000602582 DCAF5Q96JK2 942 aa19.44■□□□□ 0.7
TRIM11-206ENST00000602582 PDGFDQ9GZP0 370 aaPredicted RBP19.44■□□□□ 0.7
TRIM11-206ENST00000602582 TMOD3Q9NYL9 352 aa19.44■□□□□ 0.7
TRIM11-206ENST00000602582 CCNL1Q9UK58 526 aaPredicted RBP19.44■□□□□ 0.7
TRIM11-206ENST00000602582 ADAMTS7Q9UKP4 1686 aa19.43■□□□□ 0.7
TRIM11-206ENST00000602582 ZNF853P0CG23 659 aa19.43■□□□□ 0.7
TRIM11-206ENST00000602582 GNAI1P63096 354 aa19.43■□□□□ 0.7
TRIM11-206ENST00000602582 AKT1S1Q96B36 256 aa19.43■□□□□ 0.7
TRIM11-206ENST00000602582 THUMPD2Q9BTF0 503 aaKnown RBP19.43■□□□□ 0.7
TRIM11-206ENST00000602582 C1orf141Q5JVX7 400 aa19.42■□□□□ 0.7
TRIM11-206ENST00000602582 ERVV-2B6SEH9 535 aa19.41■□□□□ 0.7
TRIM11-206ENST00000602582 SMARCC1Q92922 1105 aaPredicted RBP19.41■□□□□ 0.7
TRIM11-206ENST00000602582 AKAP4Q5JQC9 854 aa19.4■□□□□ 0.7
TRIM11-206ENST00000602582 BCL2L13Q9BXK5 485 aa19.4■□□□□ 0.7
TRIM11-206ENST00000602582 C4BP0C0L5 1744 aa19.39■□□□□ 0.7
TRIM11-206ENST00000602582 MTHFSDQ2M296 383 aaKnown RBP19.39■□□□□ 0.69
TRIM11-206ENST00000602582 PANK1Q8TE04 598 aa19.39■□□□□ 0.69
TRIM11-206ENST00000602582 FRAT1Q92837 279 aaPredicted RBP19.39■□□□□ 0.69
TRIM11-206ENST00000602582 ASAP1Q9ULH1 1129 aa19.39■□□□□ 0.69
TRIM11-206ENST00000602582 MRC1P22897 1456 aa19.39■□□□□ 0.69
TRIM11-206ENST00000602582 ZNF831Q5JPB2 1677 aa19.39■□□□□ 0.69
TRIM11-206ENST00000602582 SSH1Q8WYL5 1049 aa19.38■□□□□ 0.69
TRIM11-206ENST00000602582 ZNF428Q96B54 188 aa19.38■□□□□ 0.69
TRIM11-206ENST00000602582 CFAP44Q96MT7 982 aa19.38■□□□□ 0.69
TRIM11-206ENST00000602582 MBIPQ9NS73 344 aa19.38■□□□□ 0.69
TRIM11-206ENST00000602582 ATG3Q9NT62 314 aa19.38■□□□□ 0.69
TRIM11-206ENST00000602582 SMC4Q9NTJ3 1288 aa19.38■□□□□ 0.69
TRIM11-206ENST00000602582 LAS1LQ9Y4W2 734 aaKnown RBP19.38■□□□□ 0.69
TRIM11-206ENST00000602582 KDM2BQ8NHM5 1336 aa19.37■□□□□ 0.69
TRIM11-206ENST00000602582 ALDH1L2Q3SY69 923 aa19.37■□□□□ 0.69
TRIM11-206ENST00000602582 LOC102724428A0A0B4J2F2 783 aa19.36■□□□□ 0.69
TRIM11-206ENST00000602582 SIK1P57059 783 aa19.36■□□□□ 0.69
TRIM11-206ENST00000602582 ZKSCAN2Q63HK3 967 aa19.36■□□□□ 0.69
TRIM11-206ENST00000602582 GAS2L2Q8NHY3 880 aa19.36■□□□□ 0.69
TRIM11-206ENST00000602582 SPON1Q9HCB6 807 aa19.36■□□□□ 0.69
TRIM11-206ENST00000602582 UBR3Q6ZT12 1888 aa19.36■□□□□ 0.69
TRIM11-206ENST00000602582 PNPLA7Q6ZV29 1317 aa19.35■□□□□ 0.69
TRIM11-206ENST00000602582 COL5A3P25940 1745 aaPredicted RBP19.35■□□□□ 0.69
TRIM11-206ENST00000602582 COL24A1Q17RW2 1714 aa19.35■□□□□ 0.69
TRIM11-206ENST00000602582 ZBTB7AO95365 584 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms