RNA–Protein interactions for RNA: ENST00000602169.1

CALM3-213, Transcript of calmodulin 3, humanhuman

TSL 2

Gene CALM3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-213ENST00000602169 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
CALM3-213ENST00000602169 SCN11AQ9UI33 1791 aa17.36■□□□□ 0.37
CALM3-213ENST00000602169 DCTN1Q14203 1278 aa17.36■□□□□ 0.37
CALM3-213ENST00000602169 EZH2Q15910 746 aaKnown RBP17.36■□□□□ 0.37
CALM3-213ENST00000602169 TOGARAM1Q9Y4F4 1720 aa17.35■□□□□ 0.37
CALM3-213ENST00000602169 KCNQ2O43526 872 aa17.35■□□□□ 0.37
CALM3-213ENST00000602169 ZNF853P0CG23 659 aa17.35■□□□□ 0.37
CALM3-213ENST00000602169 SMARCC1Q92922 1105 aaPredicted RBP17.35■□□□□ 0.37
CALM3-213ENST00000602169 ACSBG1Q96GR2 724 aa17.35■□□□□ 0.37
CALM3-213ENST00000602169 CFAP44Q96MT7 982 aa17.35■□□□□ 0.37
CALM3-213ENST00000602169 IFT57Q9NWB7 429 aa17.35■□□□□ 0.37
CALM3-213ENST00000602169 CHL1O00533 1208 aa17.34■□□□□ 0.37
CALM3-213ENST00000602169 SYTL4Q96C24 671 aaPredicted RBP17.34■□□□□ 0.37
CALM3-213ENST00000602169 DOT1LQ8TEK3 1739 aa17.33■□□□□ 0.37
CALM3-213ENST00000602169 ZBED9Q6R2W3 1325 aa17.33■□□□□ 0.36
CALM3-213ENST00000602169 PLSCR1O15162 318 aa17.33■□□□□ 0.36
CALM3-213ENST00000602169 HMGB2P26583 209 aaKnown RBP17.33■□□□□ 0.36
CALM3-213ENST00000602169 GNAI1P63096 354 aa17.33■□□□□ 0.36
CALM3-213ENST00000602169 HNRNPUQ00839 825 aaKnown RBP eCLIP17.33■□□□□ 0.36
CALM3-213ENST00000602169 THUMPD2Q9BTF0 503 aaKnown RBP17.33■□□□□ 0.36
CALM3-213ENST00000602169 DLG5Q8TDM6 1919 aa17.33■□□□□ 0.36
CALM3-213ENST00000602169 BTBD11A6QL63 1104 aa17.32■□□□□ 0.36
CALM3-213ENST00000602169 APBA3O96018 575 aa17.32■□□□□ 0.36
CALM3-213ENST00000602169 ZNF790Q6PG37 636 aa17.32■□□□□ 0.36
CALM3-213ENST00000602169 NUP188Q5SRE5 1749 aa17.31■□□□□ 0.36
CALM3-213ENST00000602169 ATG3Q9NT62 314 aa17.31■□□□□ 0.36
CALM3-213ENST00000602169 RREB1Q92766 1687 aa17.31■□□□□ 0.36
CALM3-213ENST00000602169 SBF2Q86WG5 1849 aa17.31■□□□□ 0.36
CALM3-213ENST00000602169 GOLGA2Q08379 1002 aa17.3■□□□□ 0.36
CALM3-213ENST00000602169 R3HDM1Q15032 1099 aaKnown RBP17.3■□□□□ 0.36
CALM3-213ENST00000602169 PTF1AQ7RTS3 328 aa17.3■□□□□ 0.36
CALM3-213ENST00000602169 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
CALM3-213ENST00000602169 ASAP1Q9ULH1 1129 aa17.29■□□□□ 0.36
CALM3-213ENST00000602169 SIPA1L3O60292 1781 aaPredicted RBP17.29■□□□□ 0.36
CALM3-213ENST00000602169 PALLDQ8WX93 1383 aa17.28■□□□□ 0.36
CALM3-213ENST00000602169 E9PSI1 815 aa17.28■□□□□ 0.36
CALM3-213ENST00000602169 TTC5Q8N0Z6 440 aa17.28■□□□□ 0.36
CALM3-213ENST00000602169 CAMKK2Q96RR4 588 aa17.28■□□□□ 0.36
CALM3-213ENST00000602169 MYH16Q9H6N6 1097 aa17.28■□□□□ 0.36
CALM3-213ENST00000602169 TSPYL4Q9UJ04 414 aa17.28■□□□□ 0.36
CALM3-213ENST00000602169 SALL2Q9Y467 1007 aaPredicted RBP17.28■□□□□ 0.36
CALM3-213ENST00000602169 HEG1Q9ULI3 1381 aa17.28■□□□□ 0.36
CALM3-213ENST00000602169 ITGB4P16144 1822 aa17.27■□□□□ 0.36
CALM3-213ENST00000602169 SLC27A3Q5K4L6 730 aa17.27■□□□□ 0.36
CALM3-213ENST00000602169 SOS1Q07889 1333 aaPredicted RBP17.26■□□□□ 0.35
CALM3-213ENST00000602169 PAPPAQ13219 1627 aa17.26■□□□□ 0.35
CALM3-213ENST00000602169 TRMT2AQ8IZ69 625 aaKnown RBP17.26■□□□□ 0.35
CALM3-213ENST00000602169 FMNL2Q96PY5 1086 aa17.26■□□□□ 0.35
CALM3-213ENST00000602169 MBIPQ9NS73 344 aa17.26■□□□□ 0.35
CALM3-213ENST00000602169 LRP5O75197 1615 aa17.25■□□□□ 0.35
CALM3-213ENST00000602169 LOC102724428A0A0B4J2F2 783 aa17.25■□□□□ 0.35
CALM3-213ENST00000602169 SIK1P57059 783 aa17.25■□□□□ 0.35
CALM3-213ENST00000602169 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
CALM3-213ENST00000602169 SLFN5Q08AF3 891 aa17.25■□□□□ 0.35
CALM3-213ENST00000602169 SLC39A6Q13433 755 aa17.25■□□□□ 0.35
CALM3-213ENST00000602169 ZNF496Q96IT1 587 aaPredicted RBP17.25■□□□□ 0.35
CALM3-213ENST00000602169 BTAF1O14981 1849 aa17.25■□□□□ 0.35
CALM3-213ENST00000602169 KCPQ6ZWJ8 1503 aa17.25■□□□□ 0.35
CALM3-213ENST00000602169 RGPD3A6NKT7 1758 aaPredicted RBP17.25■□□□□ 0.35
CALM3-213ENST00000602169 RGPD4Q7Z3J3 1758 aa17.25■□□□□ 0.35
CALM3-213ENST00000602169 SENP3-EIF4A1A0A087X0R7 540 aa17.24■□□□□ 0.35
CALM3-213ENST00000602169 HOXB7P09629 217 aa17.24■□□□□ 0.35
CALM3-213ENST00000602169 TEX13AQ9BXU3 409 aaPredicted RBP17.24■□□□□ 0.35
CALM3-213ENST00000602169 MIS18AQ9NYP9 233 aa17.24■□□□□ 0.35
CALM3-213ENST00000602169 FANCIQ9NVI1 1328 aa17.23■□□□□ 0.35
CALM3-213ENST00000602169 ZNF831Q5JPB2 1677 aa17.23■□□□□ 0.35
CALM3-213ENST00000602169 CHMP4AQ9BY43 222 aa17.23■□□□□ 0.35
CALM3-213ENST00000602169 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
CALM3-213ENST00000602169 VIRMAQ69YN4 1812 aaKnown RBP17.22■□□□□ 0.35
CALM3-213ENST00000602169 KCNQ3O43525 872 aa17.22■□□□□ 0.35
CALM3-213ENST00000602169 SNRPA1P09661 255 aaKnown RBP17.22■□□□□ 0.35
CALM3-213ENST00000602169 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
CALM3-213ENST00000602169 KDM3BQ7LBC6 1761 aa17.22■□□□□ 0.35
CALM3-213ENST00000602169 UBR2Q8IWV8 1755 aa17.22■□□□□ 0.35
CALM3-213ENST00000602169 CICQ96RK0 1608 aaPredicted RBP17.21■□□□□ 0.35
CALM3-213ENST00000602169 PTCD1O75127 700 aaKnown RBP17.21■□□□□ 0.35
CALM3-213ENST00000602169 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
CALM3-213ENST00000602169 TXNRD1Q16881 649 aa17.21■□□□□ 0.35
CALM3-213ENST00000602169 PROM2Q8N271 834 aa17.21■□□□□ 0.35
CALM3-213ENST00000602169 KAT6BQ8WYB5 2073 aa17.2■□□□□ 0.34
CALM3-213ENST00000602169 SLC4A9Q96Q91 983 aa17.2■□□□□ 0.34
CALM3-213ENST00000602169 CCNL1Q9UK58 526 aaPredicted RBP17.2■□□□□ 0.34
CALM3-213ENST00000602169 CT47B1P0C2W7 299 aaPredicted RBP17.19■□□□□ 0.34
CALM3-213ENST00000602169 ATP6V1AP38606 617 aa17.19■□□□□ 0.34
CALM3-213ENST00000602169 DUSP27Q5VZP5 1158 aa17.19■□□□□ 0.34
CALM3-213ENST00000602169 TSR2Q969E8 191 aaKnown RBP17.19■□□□□ 0.34
CALM3-213ENST00000602169 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
CALM3-213ENST00000602169 LY75O60449 1722 aa17.18■□□□□ 0.34
CALM3-213ENST00000602169 STARD3NLO95772 234 aa17.18■□□□□ 0.34
CALM3-213ENST00000602169 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
CALM3-213ENST00000602169 RC3H1Q5TC82 1133 aaKnown RBP17.17■□□□□ 0.34
CALM3-213ENST00000602169 ZNF428Q96B54 188 aa17.17■□□□□ 0.34
CALM3-213ENST00000602169 LRRC4BQ9NT99 713 aa17.17■□□□□ 0.34
CALM3-213ENST00000602169 ERBB4Q15303 1308 aa17.17■□□□□ 0.34
CALM3-213ENST00000602169 ITPK1Q13572 414 aa17.16■□□□□ 0.34
CALM3-213ENST00000602169 ANO8Q9HCE9 1232 aaPredicted RBP17.16■□□□□ 0.34
CALM3-213ENST00000602169 CNTNAP4Q9C0A0 1308 aa17.16■□□□□ 0.34
CALM3-213ENST00000602169 CYP19A1P11511 503 aaPredicted RBP17.15■□□□□ 0.34
CALM3-213ENST00000602169 C8orf58Q8NAV2 365 aa17.15■□□□□ 0.34
CALM3-213ENST00000602169 EXOSC9Q06265 439 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms