RNA–Protein interactions for RNA: ENST00000601393.1

SNRPA-210, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-210ENST00000601393 ATG3Q9NT62 314 aa22.48■■□□□ 1.19
SNRPA-210ENST00000601393 DLG5Q8TDM6 1919 aa22.48■■□□□ 1.19
SNRPA-210ENST00000601393 U2AF1L5P0DN76 240 aaPredicted RBP22.47■■□□□ 1.19
SNRPA-210ENST00000601393 U2AF1Q01081 240 aaKnown RBP eCLIP22.47■■□□□ 1.19
SNRPA-210ENST00000601393 PHACTR3Q96KR7 559 aa22.47■■□□□ 1.19
SNRPA-210ENST00000601393 UBR2Q8IWV8 1755 aa22.47■■□□□ 1.19
SNRPA-210ENST00000601393 FCHSD2O94868 740 aa22.46■■□□□ 1.19
SNRPA-210ENST00000601393 PRKRIP1Q9H875 184 aaPredicted RBP22.46■■□□□ 1.19
SNRPA-210ENST00000601393 LGR6Q9HBX8 967 aa22.46■■□□□ 1.19
SNRPA-210ENST00000601393 MAP3K5Q99683 1374 aa22.46■■□□□ 1.19
SNRPA-210ENST00000601393 TJP1Q07157 1748 aa22.45■■□□□ 1.19
SNRPA-210ENST00000601393 RNMTO43148 476 aaKnown RBP22.45■■□□□ 1.18
SNRPA-210ENST00000601393 GAS2L2Q8NHY3 880 aa22.45■■□□□ 1.18
SNRPA-210ENST00000601393 LOC102724428A0A0B4J2F2 783 aa22.44■■□□□ 1.18
SNRPA-210ENST00000601393 SIK1P57059 783 aa22.44■■□□□ 1.18
SNRPA-210ENST00000601393 CABP4P57796 275 aa22.44■■□□□ 1.18
SNRPA-210ENST00000601393 NFATC2IPQ8NCF5 419 aa22.43■■□□□ 1.18
SNRPA-210ENST00000601393 SLC52A2Q9HAB3 445 aa22.43■■□□□ 1.18
SNRPA-210ENST00000601393 PNPLA7Q6ZV29 1317 aa22.42■■□□□ 1.18
SNRPA-210ENST00000601393 SLC4A9Q96Q91 983 aa22.42■■□□□ 1.18
SNRPA-210ENST00000601393 CEMIPQ8WUJ3 1361 aa22.41■■□□□ 1.18
SNRPA-210ENST00000601393 KCPQ6ZWJ8 1503 aa22.41■■□□□ 1.18
SNRPA-210ENST00000601393 ITPK1Q13572 414 aa22.4■■□□□ 1.18
SNRPA-210ENST00000601393 IL17REQ8NFR9 667 aa22.4■■□□□ 1.18
SNRPA-210ENST00000601393 PLEKHF1Q96S99 279 aa22.4■■□□□ 1.18
SNRPA-210ENST00000601393 MYH14Q7Z406 1995 aaKnown RBP22.39■■□□□ 1.18
SNRPA-210ENST00000601393 GNAT3A8MTJ3 354 aa22.39■■□□□ 1.17
SNRPA-210ENST00000601393 LINC00116Q8NCU8 138 aa22.39■■□□□ 1.17
SNRPA-210ENST00000601393 HMGB2P26583 209 aaKnown RBP22.37■■□□□ 1.17
SNRPA-210ENST00000601393 SPON1Q9HCB6 807 aa22.36■■□□□ 1.17
SNRPA-210ENST00000601393 TFCP2L1Q9NZI6 479 aa22.36■■□□□ 1.17
SNRPA-210ENST00000601393 ZBTB7AO95365 584 aa22.35■■□□□ 1.17
SNRPA-210ENST00000601393 ATP6V1AP38606 617 aa22.35■■□□□ 1.17
SNRPA-210ENST00000601393 AMIGO3Q86WK7 504 aa22.35■■□□□ 1.17
SNRPA-210ENST00000601393 SGIP1Q9BQI5 828 aa22.35■■□□□ 1.17
SNRPA-210ENST00000601393 PTGER2P43116 358 aa22.34■■□□□ 1.17
SNRPA-210ENST00000601393 MTFR1LQ9H019 292 aa22.34■■□□□ 1.17
SNRPA-210ENST00000601393 C4AP0C0L4 1744 aa22.33■■□□□ 1.17
SNRPA-210ENST00000601393 COL23A1Q86Y22 540 aaPredicted RBP22.32■■□□□ 1.16
SNRPA-210ENST00000601393 SLC16A10Q8TF71 515 aa22.32■■□□□ 1.16
SNRPA-210ENST00000601393 RBM42Q9BTD8 480 aaKnown RBP22.32■■□□□ 1.16
SNRPA-210ENST00000601393 HTATSF1O43719 755 aaKnown RBP22.31■■□□□ 1.16
SNRPA-210ENST00000601393 SLC39A6Q13433 755 aa22.31■■□□□ 1.16
SNRPA-210ENST00000601393 CNTNAP4Q9C0A0 1308 aa22.31■■□□□ 1.16
SNRPA-210ENST00000601393 KDM3BQ7LBC6 1761 aa22.3■■□□□ 1.16
SNRPA-210ENST00000601393 PTCD1O75127 700 aaKnown RBP22.3■■□□□ 1.16
SNRPA-210ENST00000601393 AK7Q96M32 723 aa22.3■■□□□ 1.16
SNRPA-210ENST00000601393 TEFQ10587 303 aa22.29■■□□□ 1.16
SNRPA-210ENST00000601393 ATF5Q9Y2D1 282 aaPredicted RBP22.29■■□□□ 1.16
SNRPA-210ENST00000601393 NFE2L2Q16236 605 aa22.28■■□□□ 1.16
SNRPA-210ENST00000601393 RC3H1Q5TC82 1133 aaKnown RBP22.28■■□□□ 1.16
SNRPA-210ENST00000601393 MCM10Q7L590 875 aa22.28■■□□□ 1.16
SNRPA-210ENST00000601393 PNNQ9H307 717 aaKnown RBP22.28■■□□□ 1.16
SNRPA-210ENST00000601393 SSFA2P28290 1259 aa22.27■■□□□ 1.16
SNRPA-210ENST00000601393 FLAD1Q8NFF5 587 aa22.27■■□□□ 1.16
SNRPA-210ENST00000601393 DCTN1Q14203 1278 aa22.26■■□□□ 1.15
SNRPA-210ENST00000601393 SMIM5Q71RC9 77 aa22.26■■□□□ 1.15
SNRPA-210ENST00000601393 VSIG10Q8N0Z9 540 aa22.26■■□□□ 1.15
SNRPA-210ENST00000601393 MAPK8IP3Q9UPT6 1336 aa22.26■■□□□ 1.15
SNRPA-210ENST00000601393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.25■■□□□ 1.15
SNRPA-210ENST00000601393 GNPATO15228 680 aa22.25■■□□□ 1.15
SNRPA-210ENST00000601393 ZNF790Q6PG37 636 aa22.25■■□□□ 1.15
SNRPA-210ENST00000601393 RTF1Q92541 710 aaKnown RBP22.25■■□□□ 1.15
SNRPA-210ENST00000601393 NEFMP07197 916 aa22.24■■□□□ 1.15
SNRPA-210ENST00000601393 DNAJC10Q8IXB1 793 aa22.24■■□□□ 1.15
SNRPA-210ENST00000601393 CCDC184Q52MB2 194 aa22.23■■□□□ 1.15
SNRPA-210ENST00000601393 ADAMTS8Q9UP79 889 aa22.23■■□□□ 1.15
SNRPA-210ENST00000601393 HEG1Q9ULI3 1381 aa22.23■■□□□ 1.15
SNRPA-210ENST00000601393 RPS6KA4O75676 772 aa22.22■■□□□ 1.15
SNRPA-210ENST00000601393 CRKLP46109 303 aaKnown RBP22.22■■□□□ 1.15
SNRPA-210ENST00000601393 WDR43Q15061 677 aaKnown RBP eCLIP22.22■■□□□ 1.15
SNRPA-210ENST00000601393 ZNF496Q96IT1 587 aaPredicted RBP22.22■■□□□ 1.15
SNRPA-210ENST00000601393 LAMB4A4D0S4 1761 aa22.21■■□□□ 1.15
SNRPA-210ENST00000601393 BTBD11A6QL63 1104 aa22.21■■□□□ 1.15
SNRPA-210ENST00000601393 KCNQ3O43525 872 aa22.21■■□□□ 1.15
SNRPA-210ENST00000601393 PHF14O94880 888 aa22.21■■□□□ 1.15
SNRPA-210ENST00000601393 CYP19A1P11511 503 aaPredicted RBP22.21■■□□□ 1.15
SNRPA-210ENST00000601393 INTS5Q6P9B9 1019 aaKnown RBP22.21■■□□□ 1.15
SNRPA-210ENST00000601393 TTC5Q8N0Z6 440 aa22.21■■□□□ 1.15
SNRPA-210ENST00000601393 ADRA2BP18089 450 aa22.2■■□□□ 1.14
SNRPA-210ENST00000601393 TMPOP42166 694 aaKnown RBP22.2■■□□□ 1.14
SNRPA-210ENST00000601393 CCDC146Q8IYE0 955 aa22.2■■□□□ 1.14
SNRPA-210ENST00000601393 RTCBQ9Y3I0 505 aaKnown RBP22.2■■□□□ 1.14
SNRPA-210ENST00000601393 RUNDC1Q96C34 613 aa22.19■■□□□ 1.14
SNRPA-210ENST00000601393 MSH5O43196 834 aa22.18■■□□□ 1.14
SNRPA-210ENST00000601393 THUMPD2Q9BTF0 503 aaKnown RBP22.18■■□□□ 1.14
SNRPA-210ENST00000601393 PPP1R1BQ9UD71 204 aaPredicted RBP22.18■■□□□ 1.14
SNRPA-210ENST00000601393 ANP32CO43423 234 aa22.17■■□□□ 1.14
SNRPA-210ENST00000601393 TAF7Q15545 349 aaPredicted RBP22.17■■□□□ 1.14
SNRPA-210ENST00000601393 FMNL2Q96PY5 1086 aa22.17■■□□□ 1.14
SNRPA-210ENST00000601393 ARXQ96QS3 562 aa22.17■■□□□ 1.14
SNRPA-210ENST00000601393 CCDC87Q9NVE4 849 aa22.17■■□□□ 1.14
SNRPA-210ENST00000601393 SOS1Q07889 1333 aaPredicted RBP22.16■■□□□ 1.14
SNRPA-210ENST00000601393 RIPK4P57078 832 aa22.16■■□□□ 1.14
SNRPA-210ENST00000601393 TRAPPC3LQ5T215 181 aa22.16■■□□□ 1.14
SNRPA-210ENST00000601393 MSL1Q68DK7 614 aa22.16■■□□□ 1.14
SNRPA-210ENST00000601393 ARHGEF1Q92888 912 aaKnown RBP22.16■■□□□ 1.14
SNRPA-210ENST00000601393 POLD1P28340 1107 aa22.15■■□□□ 1.14
SNRPA-210ENST00000601393 ZBTB1Q9Y2K1 713 aa22.15■■□□□ 1.14
SNRPA-210ENST00000601393 SCN7AQ01118 1682 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms