RNA–Protein interactions for RNA: ENST00000600297.1

SLC27A1-209, Transcript of solute carrier family 27 member 1, humanhuman

TSL 2

Gene SLC27A1, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-209ENST00000600297 MYBBP1AQ9BQG0 1328 aaKnown RBP30.98■■■□□ 2.55
SLC27A1-209ENST00000600297 C4BP0C0L5 1744 aa30.98■■■□□ 2.55
SLC27A1-209ENST00000600297 SCN11AQ9UI33 1791 aa30.98■■■□□ 2.55
SLC27A1-209ENST00000600297 FCHSD2O94868 740 aa30.98■■■□□ 2.55
SLC27A1-209ENST00000600297 KDM6AO15550 1401 aaPredicted RBP30.98■■■□□ 2.55
SLC27A1-209ENST00000600297 MSH5O43196 834 aa30.97■■■□□ 2.55
SLC27A1-209ENST00000600297 MTHFSDQ2M296 383 aaKnown RBP30.97■■■□□ 2.55
SLC27A1-209ENST00000600297 RSPH6AQ9H0K4 717 aa30.97■■■□□ 2.55
SLC27A1-209ENST00000600297 POLD1P28340 1107 aa30.96■■■□□ 2.55
SLC27A1-209ENST00000600297 GAS2L2Q8NHY3 880 aa30.95■■■□□ 2.55
SLC27A1-209ENST00000600297 VIRMAQ69YN4 1812 aaKnown RBP30.94■■■□□ 2.54
SLC27A1-209ENST00000600297 UBR3Q6ZT12 1888 aa30.94■■■□□ 2.54
SLC27A1-209ENST00000600297 SYT17Q9BSW7 474 aa30.94■■■□□ 2.54
SLC27A1-209ENST00000600297 PRKRIP1Q9H875 184 aaPredicted RBP30.94■■■□□ 2.54
SLC27A1-209ENST00000600297 PRKAR2BP31323 418 aa30.93■■■□□ 2.54
SLC27A1-209ENST00000600297 CABP4P57796 275 aa30.93■■■□□ 2.54
SLC27A1-209ENST00000600297 KLHL34Q8N239 644 aa30.9■■■□□ 2.54
SLC27A1-209ENST00000600297 ADAMTS7Q9UKP4 1686 aa30.9■■■□□ 2.54
SLC27A1-209ENST00000600297 COL23A1Q86Y22 540 aaPredicted RBP30.89■■■□□ 2.54
SLC27A1-209ENST00000600297 AK7Q96M32 723 aa30.88■■■□□ 2.53
SLC27A1-209ENST00000600297 PNNQ9H307 717 aaKnown RBP30.88■■■□□ 2.53
SLC27A1-209ENST00000600297 ATG3Q9NT62 314 aa30.88■■■□□ 2.53
SLC27A1-209ENST00000600297 ASAP1Q9ULH1 1129 aa30.88■■■□□ 2.53
SLC27A1-209ENST00000600297 CHD4Q14839 1912 aa30.88■■■□□ 2.53
SLC27A1-209ENST00000600297 MAP3K5Q99683 1374 aa30.88■■■□□ 2.53
SLC27A1-209ENST00000600297 RNMTO43148 476 aaKnown RBP30.87■■■□□ 2.53
SLC27A1-209ENST00000600297 NFATC2IPQ8NCF5 419 aa30.87■■■□□ 2.53
SLC27A1-209ENST00000600297 FLAD1Q8NFF5 587 aa30.87■■■□□ 2.53
SLC27A1-209ENST00000600297 PHACTR3Q96KR7 559 aa30.87■■■□□ 2.53
SLC27A1-209ENST00000600297 LOC102724428A0A0B4J2F2 783 aa30.86■■■□□ 2.53
SLC27A1-209ENST00000600297 GNAT3A8MTJ3 354 aa30.86■■■□□ 2.53
SLC27A1-209ENST00000600297 YY1P25490 414 aa30.86■■■□□ 2.53
SLC27A1-209ENST00000600297 SIK1P57059 783 aa30.86■■■□□ 2.53
SLC27A1-209ENST00000600297 NEFMP07197 916 aa30.85■■■□□ 2.53
SLC27A1-209ENST00000600297 SLC52A2Q9HAB3 445 aa30.85■■■□□ 2.53
SLC27A1-209ENST00000600297 LGR6Q9HBX8 967 aa30.85■■■□□ 2.53
SLC27A1-209ENST00000600297 MRC1P22897 1456 aa30.84■■■□□ 2.53
SLC27A1-209ENST00000600297 ZNF831Q5JPB2 1677 aa30.83■■■□□ 2.53
SLC27A1-209ENST00000600297 MSL1Q68DK7 614 aa30.82■■■□□ 2.52
SLC27A1-209ENST00000600297 ATP6V1AP38606 617 aa30.81■■■□□ 2.52
SLC27A1-209ENST00000600297 COL5A3P25940 1745 aaPredicted RBP30.79■■■□□ 2.52
SLC27A1-209ENST00000600297 PHF14O94880 888 aa30.79■■■□□ 2.52
SLC27A1-209ENST00000600297 LINC00116Q8NCU8 138 aa30.79■■■□□ 2.52
SLC27A1-209ENST00000600297 IL17REQ8NFR9 667 aa30.77■■■□□ 2.52
SLC27A1-209ENST00000600297 PLEKHF1Q96S99 279 aa30.77■■■□□ 2.52
SLC27A1-209ENST00000600297 HTATSF1O43719 755 aaKnown RBP30.76■■■□□ 2.51
SLC27A1-209ENST00000600297 ITPK1Q13572 414 aa30.76■■■□□ 2.51
SLC27A1-209ENST00000600297 RBM42Q9BTD8 480 aaKnown RBP30.76■■■□□ 2.51
SLC27A1-209ENST00000600297 TEFQ10587 303 aa30.75■■■□□ 2.51
SLC27A1-209ENST00000600297 RTF1Q92541 710 aaKnown RBP30.75■■■□□ 2.51
SLC27A1-209ENST00000600297 CEMIPQ8WUJ3 1361 aa30.75■■■□□ 2.51
SLC27A1-209ENST00000600297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.74■■■□□ 2.51
SLC27A1-209ENST00000600297 SSFA2P28290 1259 aa30.74■■■□□ 2.51
SLC27A1-209ENST00000600297 GNPATO15228 680 aa30.73■■■□□ 2.51
SLC27A1-209ENST00000600297 AMIGO3Q86WK7 504 aa30.73■■■□□ 2.51
SLC27A1-209ENST00000600297 SIPA1L3O60292 1781 aaPredicted RBP30.73■■■□□ 2.51
SLC27A1-209ENST00000600297 MAPK8IP3Q9UPT6 1336 aa30.73■■■□□ 2.51
SLC27A1-209ENST00000600297 WDR43Q15061 677 aaKnown RBP eCLIP30.72■■■□□ 2.51
SLC27A1-209ENST00000600297 DLG5Q8TDM6 1919 aa30.71■■■□□ 2.51
SLC27A1-209ENST00000600297 GPR162Q16538 588 aa30.71■■■□□ 2.51
SLC27A1-209ENST00000600297 SMIM5Q71RC9 77 aa30.71■■■□□ 2.51
SLC27A1-209ENST00000600297 CICQ96RK0 1608 aaPredicted RBP30.7■■■□□ 2.51
SLC27A1-209ENST00000600297 ANP32CO43423 234 aa30.7■■■□□ 2.51
SLC27A1-209ENST00000600297 PTCD1O75127 700 aaKnown RBP30.7■■■□□ 2.51
SLC27A1-209ENST00000600297 PELP1Q8IZL8 1130 aaKnown RBP30.7■■■□□ 2.51
SLC27A1-209ENST00000600297 SLC4A9Q96Q91 983 aa30.7■■■□□ 2.51
SLC27A1-209ENST00000600297 MYH14Q7Z406 1995 aaKnown RBP30.69■■■□□ 2.5
SLC27A1-209ENST00000600297 NLGN2Q8NFZ4 835 aa30.69■■■□□ 2.5
SLC27A1-209ENST00000600297 NFE2L2Q16236 605 aa30.68■■■□□ 2.5
SLC27A1-209ENST00000600297 TJP1Q07157 1748 aa30.67■■■□□ 2.5
SLC27A1-209ENST00000600297 UBR2Q8IWV8 1755 aa30.66■■■□□ 2.5
SLC27A1-209ENST00000600297 SLC39A6Q13433 755 aa30.66■■■□□ 2.5
SLC27A1-209ENST00000600297 RC3H1Q5TC82 1133 aaKnown RBP30.66■■■□□ 2.5
SLC27A1-209ENST00000600297 TTC5Q8N0Z6 440 aa30.65■■■□□ 2.5
SLC27A1-209ENST00000600297 C4AP0C0L4 1744 aa30.64■■■□□ 2.5
SLC27A1-209ENST00000600297 VSIG10Q8N0Z9 540 aa30.64■■■□□ 2.5
SLC27A1-209ENST00000600297 RTCBQ9Y3I0 505 aaKnown RBP30.64■■■□□ 2.5
SLC27A1-209ENST00000600297 ZNF790Q6PG37 636 aa30.63■■■□□ 2.49
SLC27A1-209ENST00000600297 MCM10Q7L590 875 aa30.63■■■□□ 2.49
SLC27A1-209ENST00000600297 CNTNAP4Q9C0A0 1308 aa30.63■■■□□ 2.49
SLC27A1-209ENST00000600297 KCPQ6ZWJ8 1503 aa30.63■■■□□ 2.49
SLC27A1-209ENST00000600297 ADAMTS8Q9UP79 889 aa30.62■■■□□ 2.49
SLC27A1-209ENST00000600297 RUNDC1Q96C34 613 aa30.61■■■□□ 2.49
SLC27A1-209ENST00000600297 BTBD11A6QL63 1104 aa30.6■■■□□ 2.49
SLC27A1-209ENST00000600297 TRAPPC3LQ5T215 181 aa30.6■■■□□ 2.49
SLC27A1-209ENST00000600297 CD2APQ9Y5K6 639 aa30.6■■■□□ 2.49
SLC27A1-209ENST00000600297 DCTN1Q14203 1278 aa30.59■■■□□ 2.49
SLC27A1-209ENST00000600297 TMPOP42166 694 aaKnown RBP30.57■■■□□ 2.48
SLC27A1-209ENST00000600297 TAF7Q15545 349 aaPredicted RBP30.57■■■□□ 2.48
SLC27A1-209ENST00000600297 ADRA2BP18089 450 aa30.56■■■□□ 2.48
SLC27A1-209ENST00000600297 RIPK4P57078 832 aa30.56■■■□□ 2.48
SLC27A1-209ENST00000600297 LMOD3Q0VAK6 560 aa30.56■■■□□ 2.48
SLC27A1-209ENST00000600297 RPS6KA4O75676 772 aa30.55■■■□□ 2.48
SLC27A1-209ENST00000600297 DNAJC10Q8IXB1 793 aa30.55■■■□□ 2.48
SLC27A1-209ENST00000600297 ZNF496Q96IT1 587 aaPredicted RBP30.55■■■□□ 2.48
SLC27A1-209ENST00000600297 FMNL2Q96PY5 1086 aa30.55■■■□□ 2.48
SLC27A1-209ENST00000600297 TEX13AQ9BXU3 409 aaPredicted RBP30.55■■■□□ 2.48
SLC27A1-209ENST00000600297 CRKLP46109 303 aaKnown RBP30.54■■■□□ 2.48
SLC27A1-209ENST00000600297 CCDC146Q8IYE0 955 aa30.54■■■□□ 2.48
SLC27A1-209ENST00000600297 HEG1Q9ULI3 1381 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms