RNA–Protein interactions for RNA: ENST00000599839.5

CALM3-212, Transcript of calmodulin 3, humanhuman

TSL 1 (best) BASIC

Gene CALM3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-212ENST00000599839 NFATC2IPQ8NCF5 419 aa20.87■□□□□ 0.93
CALM3-212ENST00000599839 ASAP1Q9ULH1 1129 aa20.87■□□□□ 0.93
CALM3-212ENST00000599839 TUBGCP6Q96RT7 1819 aa20.87■□□□□ 0.93
CALM3-212ENST00000599839 DCTN1Q14203 1278 aa20.86■□□□□ 0.93
CALM3-212ENST00000599839 NFE2L2Q16236 605 aa20.86■□□□□ 0.93
CALM3-212ENST00000599839 SLC52A2Q9HAB3 445 aa20.86■□□□□ 0.93
CALM3-212ENST00000599839 LRRC4BQ9NT99 713 aa20.86■□□□□ 0.93
CALM3-212ENST00000599839 TJP1Q07157 1748 aa20.86■□□□□ 0.93
CALM3-212ENST00000599839 MCM10Q7L590 875 aa20.85■□□□□ 0.93
CALM3-212ENST00000599839 PNNQ9H307 717 aaKnown RBP20.85■□□□□ 0.93
CALM3-212ENST00000599839 ATG3Q9NT62 314 aa20.85■□□□□ 0.93
CALM3-212ENST00000599839 RUNDC1Q96C34 613 aa20.85■□□□□ 0.93
CALM3-212ENST00000599839 RRP7AQ9Y3A4 280 aaKnown RBP20.85■□□□□ 0.93
CALM3-212ENST00000599839 COL5A3P25940 1745 aaPredicted RBP20.84■□□□□ 0.93
CALM3-212ENST00000599839 KCPQ6ZWJ8 1503 aa20.84■□□□□ 0.93
CALM3-212ENST00000599839 ZNF831Q5JPB2 1677 aa20.84■□□□□ 0.93
CALM3-212ENST00000599839 NEFMP07197 916 aa20.84■□□□□ 0.93
CALM3-212ENST00000599839 ANO8Q9HCE9 1232 aaPredicted RBP20.84■□□□□ 0.93
CALM3-212ENST00000599839 KDM3BQ7LBC6 1761 aa20.83■□□□□ 0.93
CALM3-212ENST00000599839 TMPOP42166 694 aaKnown RBP20.83■□□□□ 0.92
CALM3-212ENST00000599839 CICQ96RK0 1608 aaPredicted RBP20.82■□□□□ 0.92
CALM3-212ENST00000599839 THUMPD2Q9BTF0 503 aaKnown RBP20.82■□□□□ 0.92
CALM3-212ENST00000599839 SENP3-EIF4A1A0A087X0R7 540 aa20.81■□□□□ 0.92
CALM3-212ENST00000599839 C4BP0C0L5 1744 aa20.81■□□□□ 0.92
CALM3-212ENST00000599839 SLC39A6Q13433 755 aa20.8■□□□□ 0.92
CALM3-212ENST00000599839 MIER1Q8N108 512 aa20.8■□□□□ 0.92
CALM3-212ENST00000599839 RTF1Q92541 710 aaKnown RBP20.8■□□□□ 0.92
CALM3-212ENST00000599839 SLC4A9Q96Q91 983 aa20.8■□□□□ 0.92
CALM3-212ENST00000599839 CCNL1Q9UK58 526 aaPredicted RBP20.8■□□□□ 0.92
CALM3-212ENST00000599839 HTATSF1O43719 755 aaKnown RBP20.79■□□□□ 0.92
CALM3-212ENST00000599839 RIPK4P57078 832 aa20.79■□□□□ 0.92
CALM3-212ENST00000599839 NEUROD2Q15784 382 aa20.79■□□□□ 0.92
CALM3-212ENST00000599839 SMARCC1Q92922 1105 aaPredicted RBP20.79■□□□□ 0.92
CALM3-212ENST00000599839 QSER1Q2KHR3 1735 aa20.79■□□□□ 0.92
CALM3-212ENST00000599839 APAF1O14727 1248 aa20.78■□□□□ 0.92
CALM3-212ENST00000599839 TEFQ10587 303 aa20.78■□□□□ 0.92
CALM3-212ENST00000599839 SLC27A3Q5K4L6 730 aa20.78■□□□□ 0.92
CALM3-212ENST00000599839 FAM9BQ8IZU0 186 aa20.78■□□□□ 0.92
CALM3-212ENST00000599839 CASZ1Q86V15 1759 aa20.77■□□□□ 0.92
CALM3-212ENST00000599839 LOC102724428A0A0B4J2F2 783 aa20.77■□□□□ 0.92
CALM3-212ENST00000599839 SIK1P57059 783 aa20.77■□□□□ 0.92
CALM3-212ENST00000599839 ITPK1Q13572 414 aa20.77■□□□□ 0.92
CALM3-212ENST00000599839 ZNF827Q17R98 1081 aa20.77■□□□□ 0.92
CALM3-212ENST00000599839 TRIM35Q9UPQ4 493 aa20.77■□□□□ 0.92
CALM3-212ENST00000599839 UBR3Q6ZT12 1888 aa20.77■□□□□ 0.92
CALM3-212ENST00000599839 PSDA5PKW4 1024 aaPredicted RBP20.76■□□□□ 0.91
CALM3-212ENST00000599839 MYH14Q7Z406 1995 aaKnown RBP20.76■□□□□ 0.91
CALM3-212ENST00000599839 CCER2I3L3R5 266 aa20.75■□□□□ 0.91
CALM3-212ENST00000599839 KCNQ3O43525 872 aa20.75■□□□□ 0.91
CALM3-212ENST00000599839 PTCD1O75127 700 aaKnown RBP20.74■□□□□ 0.91
CALM3-212ENST00000599839 R3HDM1Q15032 1099 aaKnown RBP20.74■□□□□ 0.91
CALM3-212ENST00000599839 RBM42Q9BTD8 480 aaKnown RBP20.74■□□□□ 0.91
CALM3-212ENST00000599839 LINC00116Q8NCU8 138 aa20.73■□□□□ 0.91
CALM3-212ENST00000599839 BTBD11A6QL63 1104 aa20.72■□□□□ 0.91
CALM3-212ENST00000599839 ATP6V1AP38606 617 aa20.72■□□□□ 0.91
CALM3-212ENST00000599839 AKT1S1Q96B36 256 aa20.72■□□□□ 0.91
CALM3-212ENST00000599839 MIS18AQ9NYP9 233 aa20.72■□□□□ 0.91
CALM3-212ENST00000599839 ZNF790Q6PG37 636 aa20.72■□□□□ 0.91
CALM3-212ENST00000599839 LAMB4A4D0S4 1761 aa20.71■□□□□ 0.91
CALM3-212ENST00000599839 SLC15A2Q16348 729 aa20.71■□□□□ 0.91
CALM3-212ENST00000599839 NBPF14Q5TI25 921 aa20.71■□□□□ 0.91
CALM3-212ENST00000599839 PDGFDQ9GZP0 370 aaPredicted RBP20.71■□□□□ 0.91
CALM3-212ENST00000599839 LMOD3Q0VAK6 560 aa20.7■□□□□ 0.9
CALM3-212ENST00000599839 AMIGO3Q86WK7 504 aa20.7■□□□□ 0.9
CALM3-212ENST00000599839 ZNF496Q96IT1 587 aaPredicted RBP20.7■□□□□ 0.9
CALM3-212ENST00000599839 STK32BQ9NY57 414 aa20.7■□□□□ 0.9
CALM3-212ENST00000599839 TAF7Q15545 349 aaPredicted RBP20.69■□□□□ 0.9
CALM3-212ENST00000599839 TTC5Q8N0Z6 440 aa20.69■□□□□ 0.9
CALM3-212ENST00000599839 C4AP0C0L4 1744 aa20.68■□□□□ 0.9
CALM3-212ENST00000599839 HEG1Q9ULI3 1381 aa20.68■□□□□ 0.9
CALM3-212ENST00000599839 SMIM5Q71RC9 77 aa20.67■□□□□ 0.9
CALM3-212ENST00000599839 DNAJC10Q8IXB1 793 aa20.67■□□□□ 0.9
CALM3-212ENST00000599839 PNPLA7Q6ZV29 1317 aa20.66■□□□□ 0.9
CALM3-212ENST00000599839 PRAMEF22A3QJZ6 481 aa20.65■□□□□ 0.9
CALM3-212ENST00000599839 SALL2Q9Y467 1007 aaPredicted RBP20.64■□□□□ 0.89
CALM3-212ENST00000599839 FMNL2Q96PY5 1086 aa20.63■□□□□ 0.89
CALM3-212ENST00000599839 CNTNAP4Q9C0A0 1308 aa20.63■□□□□ 0.89
CALM3-212ENST00000599839 VSIG10Q8N0Z9 540 aa20.62■□□□□ 0.89
CALM3-212ENST00000599839 AK7Q96M32 723 aa20.62■□□□□ 0.89
CALM3-212ENST00000599839 TFCP2L1Q9NZI6 479 aa20.62■□□□□ 0.89
CALM3-212ENST00000599839 TSPYL4Q9UJ04 414 aa20.62■□□□□ 0.89
CALM3-212ENST00000599839 COL24A1Q17RW2 1714 aa20.62■□□□□ 0.89
CALM3-212ENST00000599839 GNPATO15228 680 aa20.61■□□□□ 0.89
CALM3-212ENST00000599839 CYP19A1P11511 503 aaPredicted RBP20.61■□□□□ 0.89
CALM3-212ENST00000599839 CRKLP46109 303 aaKnown RBP20.61■□□□□ 0.89
CALM3-212ENST00000599839 CCDC27Q2M243 656 aa20.61■□□□□ 0.89
CALM3-212ENST00000599839 WWC1Q8IX03 1113 aa20.61■□□□□ 0.89
CALM3-212ENST00000599839 EIF4A1P60842 406 aaKnown RBP20.6■□□□□ 0.89
CALM3-212ENST00000599839 INTS5Q6P9B9 1019 aaKnown RBP20.6■□□□□ 0.89
CALM3-212ENST00000599839 LAS1LQ9Y4W2 734 aaKnown RBP20.6■□□□□ 0.89
CALM3-212ENST00000599839 CHL1O00533 1208 aa20.59■□□□□ 0.89
CALM3-212ENST00000599839 PHF14O94880 888 aa20.59■□□□□ 0.89
CALM3-212ENST00000599839 COL23A1Q86Y22 540 aaPredicted RBP20.59■□□□□ 0.89
CALM3-212ENST00000599839 LRP5O75197 1615 aa20.59■□□□□ 0.89
CALM3-212ENST00000599839 ZNF853P0CG23 659 aa20.59■□□□□ 0.89
CALM3-212ENST00000599839 KRT24Q2M2I5 525 aa20.58■□□□□ 0.88
CALM3-212ENST00000599839 RC3H1Q5TC82 1133 aaKnown RBP20.58■□□□□ 0.88
CALM3-212ENST00000599839 ZBTB1Q9Y2K1 713 aa20.58■□□□□ 0.88
CALM3-212ENST00000599839 USP16Q9Y5T5 823 aa20.58■□□□□ 0.88
CALM3-212ENST00000599839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms