RNA–Protein interactions for RNA: ENST00000599804.5

SMG9-209, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-209ENST00000599804 BABAM1Q9NWV8 329 aa21.6■■□□□ 1.05
SMG9-209ENST00000599804 PRIM1P49642 420 aaKnown RBP21.59■■□□□ 1.05
SMG9-209ENST00000599804 TAF7Q15545 349 aaPredicted RBP21.59■■□□□ 1.05
SMG9-209ENST00000599804 ACSBG1Q96GR2 724 aa21.59■■□□□ 1.05
SMG9-209ENST00000599804 THUMPD2Q9BTF0 503 aaKnown RBP21.59■■□□□ 1.05
SMG9-209ENST00000599804 NFATC2IPQ8NCF5 419 aa21.58■■□□□ 1.05
SMG9-209ENST00000599804 SYTL4Q96C24 671 aaPredicted RBP21.58■■□□□ 1.05
SMG9-209ENST00000599804 IFT57Q9NWB7 429 aa21.58■■□□□ 1.05
SMG9-209ENST00000599804 UBR2Q8IWV8 1755 aa21.58■■□□□ 1.04
SMG9-209ENST00000599804 TNS1Q9HBL0 1735 aaKnown RBP21.58■■□□□ 1.04
SMG9-209ENST00000599804 GNAI1P63096 354 aa21.57■■□□□ 1.04
SMG9-209ENST00000599804 CFAP44Q96MT7 982 aa21.57■■□□□ 1.04
SMG9-209ENST00000599804 GOLGA2Q08379 1002 aa21.56■■□□□ 1.04
SMG9-209ENST00000599804 BCL11BQ9C0K0 894 aaPredicted RBP21.56■■□□□ 1.04
SMG9-209ENST00000599804 BTBD11A6QL63 1104 aa21.55■■□□□ 1.04
SMG9-209ENST00000599804 PIGBQ92521 554 aa21.55■■□□□ 1.04
SMG9-209ENST00000599804 YTHDC1Q96MU7 727 aaKnown RBP21.55■■□□□ 1.04
SMG9-209ENST00000599804 RGPD3A6NKT7 1758 aaPredicted RBP21.54■■□□□ 1.04
SMG9-209ENST00000599804 RGPD4Q7Z3J3 1758 aa21.54■■□□□ 1.04
SMG9-209ENST00000599804 ZNF853P0CG23 659 aa21.54■■□□□ 1.04
SMG9-209ENST00000599804 LY75O60449 1722 aa21.53■■□□□ 1.04
SMG9-209ENST00000599804 E9PSI1 815 aa21.53■■□□□ 1.04
SMG9-209ENST00000599804 CHL1O00533 1208 aa21.53■■□□□ 1.04
SMG9-209ENST00000599804 KCNQ2O43526 872 aa21.53■■□□□ 1.04
SMG9-209ENST00000599804 TSPYL4Q9UJ04 414 aa21.53■■□□□ 1.04
SMG9-209ENST00000599804 MYH16Q9H6N6 1097 aa21.52■■□□□ 1.04
SMG9-209ENST00000599804 LAS1LQ9Y4W2 734 aaKnown RBP21.52■■□□□ 1.04
SMG9-209ENST00000599804 ZNF831Q5JPB2 1677 aa21.52■■□□□ 1.04
SMG9-209ENST00000599804 TRIM37O94972 964 aa21.51■■□□□ 1.03
SMG9-209ENST00000599804 TTC5Q8N0Z6 440 aa21.51■■□□□ 1.03
SMG9-209ENST00000599804 SMARCC1Q92922 1105 aaPredicted RBP21.51■■□□□ 1.03
SMG9-209ENST00000599804 ZNF790Q6PG37 636 aa21.5■■□□□ 1.03
SMG9-209ENST00000599804 CICQ96RK0 1608 aaPredicted RBP21.49■■□□□ 1.03
SMG9-209ENST00000599804 SLFN5Q08AF3 891 aa21.49■■□□□ 1.03
SMG9-209ENST00000599804 MBIPQ9NS73 344 aa21.48■■□□□ 1.03
SMG9-209ENST00000599804 ATG3Q9NT62 314 aa21.48■■□□□ 1.03
SMG9-209ENST00000599804 KCPQ6ZWJ8 1503 aa21.48■■□□□ 1.03
SMG9-209ENST00000599804 SLC39A6Q13433 755 aa21.47■■□□□ 1.03
SMG9-209ENST00000599804 CCDC125Q86Z20 511 aa21.47■■□□□ 1.03
SMG9-209ENST00000599804 MIS18AQ9NYP9 233 aa21.47■■□□□ 1.03
SMG9-209ENST00000599804 ASAP1Q9ULH1 1129 aa21.47■■□□□ 1.03
SMG9-209ENST00000599804 PALLDQ8WX93 1383 aa21.47■■□□□ 1.03
SMG9-209ENST00000599804 LAMB4A4D0S4 1761 aa21.46■■□□□ 1.03
SMG9-209ENST00000599804 SPINK5Q9NQ38 1064 aaPredicted RBP21.46■■□□□ 1.03
SMG9-209ENST00000599804 FANCIQ9NVI1 1328 aa21.46■■□□□ 1.03
SMG9-209ENST00000599804 SF3B2Q13435 895 aaKnown RBP21.45■■□□□ 1.02
SMG9-209ENST00000599804 PTF1AQ7RTS3 328 aa21.45■■□□□ 1.02
SMG9-209ENST00000599804 TRMT2AQ8IZ69 625 aaKnown RBP21.45■■□□□ 1.02
SMG9-209ENST00000599804 FMNL2Q96PY5 1086 aa21.45■■□□□ 1.02
SMG9-209ENST00000599804 TAF1LQ8IZX4 1826 aa21.44■■□□□ 1.02
SMG9-209ENST00000599804 EIF4A1P60842 406 aaKnown RBP21.44■■□□□ 1.02
SMG9-209ENST00000599804 CDCA7LQ96GN5 454 aa21.44■■□□□ 1.02
SMG9-209ENST00000599804 PLSCR1O15162 318 aa21.43■■□□□ 1.02
SMG9-209ENST00000599804 HMGB2P26583 209 aaKnown RBP21.43■■□□□ 1.02
SMG9-209ENST00000599804 VSIG10Q8N0Z9 540 aa21.43■■□□□ 1.02
SMG9-209ENST00000599804 TSR2Q969E8 191 aaKnown RBP21.43■■□□□ 1.02
SMG9-209ENST00000599804 C5P01031 1676 aa21.43■■□□□ 1.02
SMG9-209ENST00000599804 TJP1Q07157 1748 aa21.43■■□□□ 1.02
SMG9-209ENST00000599804 CACNA1FO60840 1977 aa21.43■■□□□ 1.02
SMG9-209ENST00000599804 KCNQ3O43525 872 aa21.42■■□□□ 1.02
SMG9-209ENST00000599804 APBA3O96018 575 aa21.42■■□□□ 1.02
SMG9-209ENST00000599804 COL5A3P25940 1745 aaPredicted RBP21.42■■□□□ 1.02
SMG9-209ENST00000599804 SOS1Q07889 1333 aaPredicted RBP21.42■■□□□ 1.02
SMG9-209ENST00000599804 HEG1Q9ULI3 1381 aa21.42■■□□□ 1.02
SMG9-209ENST00000599804 DUSP27Q5VZP5 1158 aa21.41■■□□□ 1.02
SMG9-209ENST00000599804 ZNF496Q96IT1 587 aaPredicted RBP21.41■■□□□ 1.02
SMG9-209ENST00000599804 PTCD1O75127 700 aaKnown RBP21.4■■□□□ 1.02
SMG9-209ENST00000599804 HOXB7P09629 217 aa21.4■■□□□ 1.02
SMG9-209ENST00000599804 RBM42Q9BTD8 480 aaKnown RBP21.4■■□□□ 1.02
SMG9-209ENST00000599804 LOC102724428A0A0B4J2F2 783 aa21.39■■□□□ 1.01
SMG9-209ENST00000599804 SNRPA1P09661 255 aaKnown RBP21.39■■□□□ 1.01
SMG9-209ENST00000599804 BAG6P46379 1132 aa21.39■■□□□ 1.01
SMG9-209ENST00000599804 SIK1P57059 783 aa21.39■■□□□ 1.01
SMG9-209ENST00000599804 ILDR2Q71H61 639 aa21.39■■□□□ 1.01
SMG9-209ENST00000599804 TEX13AQ9BXU3 409 aaPredicted RBP21.39■■□□□ 1.01
SMG9-209ENST00000599804 CHMP4AQ9BY43 222 aa21.39■■□□□ 1.01
SMG9-209ENST00000599804 RREB1Q92766 1687 aa21.39■■□□□ 1.01
SMG9-209ENST00000599804 SLC27A3Q5K4L6 730 aa21.38■■□□□ 1.01
SMG9-209ENST00000599804 GIGYF1O75420 1035 aaPredicted RBP21.37■■□□□ 1.01
SMG9-209ENST00000599804 CT47B1P0C2W7 299 aaPredicted RBP21.37■■□□□ 1.01
SMG9-209ENST00000599804 EXOSC9Q06265 439 aaKnown RBP21.37■■□□□ 1.01
SMG9-209ENST00000599804 ATP6V1AP38606 617 aa21.36■■□□□ 1.01
SMG9-209ENST00000599804 TWISTNBQ3B726 338 aaPredicted RBP21.35■■□□□ 1.01
SMG9-209ENST00000599804 UPF1Q92900 1129 aaKnown RBP eCLIP21.35■■□□□ 1.01
SMG9-209ENST00000599804 CCNL1Q9UK58 526 aaPredicted RBP21.35■■□□□ 1.01
SMG9-209ENST00000599804 TXNRD1Q16881 649 aa21.34■■□□□ 1.01
SMG9-209ENST00000599804 C8orf58Q8NAV2 365 aa21.34■■□□□ 1.01
SMG9-209ENST00000599804 SLC4A9Q96Q91 983 aa21.34■■□□□ 1.01
SMG9-209ENST00000599804 KRT24Q2M2I5 525 aa21.33■■□□□ 1.01
SMG9-209ENST00000599804 ZNF428Q96B54 188 aa21.33■■□□□ 1.01
SMG9-209ENST00000599804 C4BP0C0L5 1744 aa21.32■■□□□ 1
SMG9-209ENST00000599804 NUP188Q5SRE5 1749 aa21.32■■□□□ 1
SMG9-209ENST00000599804 MYH14Q7Z406 1995 aaKnown RBP21.32■■□□□ 1
SMG9-209ENST00000599804 STARD3NLO95772 234 aa21.32■■□□□ 1
SMG9-209ENST00000599804 CAMKK2Q96RR4 588 aa21.32■■□□□ 1
SMG9-209ENST00000599804 EN1Q05925 392 aaPredicted RBP21.31■■□□□ 1
SMG9-209ENST00000599804 DNAJC10Q8IXB1 793 aa21.31■■□□□ 1
SMG9-209ENST00000599804 TSPYL6Q8N831 410 aa21.31■■□□□ 1
SMG9-209ENST00000599804 ELL2O00472 640 aaPredicted RBP21.3■■□□□ 1
SMG9-209ENST00000599804 VAMP4O75379 141 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms