RNA–Protein interactions for RNA: ENST00000599735.3

LINC02028-213, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5

Gene LINC02028, Length 726 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-213ENST00000599735 PHF14O94880 888 aa16.91■□□□□ 0.3
LINC02028-213ENST00000599735 ADRA2BP18089 450 aa16.91■□□□□ 0.3
LINC02028-213ENST00000599735 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
LINC02028-213ENST00000599735 PLEKHO1Q53GL0 409 aaPredicted RBP16.91■□□□□ 0.3
LINC02028-213ENST00000599735 NLGN1Q8N2Q7 840 aa16.91■□□□□ 0.3
LINC02028-213ENST00000599735 ADCY9O60503 1353 aa16.89■□□□□ 0.3
LINC02028-213ENST00000599735 TRAPPC3LQ5T215 181 aa16.89■□□□□ 0.29
LINC02028-213ENST00000599735 RTCBQ9Y3I0 505 aaKnown RBP16.89■□□□□ 0.29
LINC02028-213ENST00000599735 KDRP35968 1356 aa16.89■□□□□ 0.29
LINC02028-213ENST00000599735 ATP10DQ9P241 1426 aa16.88■□□□□ 0.29
LINC02028-213ENST00000599735 TGFB2P61812 414 aa16.88■□□□□ 0.29
LINC02028-213ENST00000599735 PANK3Q9H999 370 aa16.88■□□□□ 0.29
LINC02028-213ENST00000599735 GPBP1L1Q9HC44 474 aaPredicted RBP16.88■□□□□ 0.29
LINC02028-213ENST00000599735 ZNF831Q5JPB2 1677 aa16.88■□□□□ 0.29
LINC02028-213ENST00000599735 TNNT2P45379 298 aaPredicted RBP16.87■□□□□ 0.29
LINC02028-213ENST00000599735 CNTNAP4Q9C0A0 1308 aa16.87■□□□□ 0.29
LINC02028-213ENST00000599735 RPS6KA4O75676 772 aa16.86■□□□□ 0.29
LINC02028-213ENST00000599735 MMP10P09238 476 aa16.86■□□□□ 0.29
LINC02028-213ENST00000599735 SMIM5Q71RC9 77 aa16.86■□□□□ 0.29
LINC02028-213ENST00000599735 SLC4A9Q96Q91 983 aa16.86■□□□□ 0.29
LINC02028-213ENST00000599735 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
LINC02028-213ENST00000599735 HSPA5P11021 654 aaKnown RBP16.84■□□□□ 0.29
LINC02028-213ENST00000599735 CABP4P57796 275 aa16.84■□□□□ 0.29
LINC02028-213ENST00000599735 ARHGEF1Q92888 912 aaKnown RBP16.84■□□□□ 0.29
LINC02028-213ENST00000599735 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
LINC02028-213ENST00000599735 MTHFSP49914 203 aa16.83■□□□□ 0.28
LINC02028-213ENST00000599735 ZNF530Q6P9A1 599 aaPredicted RBP16.83■□□□□ 0.28
LINC02028-213ENST00000599735 MORC1Q86VD1 984 aa16.83■□□□□ 0.28
LINC02028-213ENST00000599735 RFC4P35249 363 aa16.82■□□□□ 0.28
LINC02028-213ENST00000599735 C1orf141Q5JVX7 400 aa16.82■□□□□ 0.28
LINC02028-213ENST00000599735 PCGF6Q9BYE7 350 aa16.82■□□□□ 0.28
LINC02028-213ENST00000599735 KDM6AO15550 1401 aaPredicted RBP16.81■□□□□ 0.28
LINC02028-213ENST00000599735 GYS1P13807 737 aa16.81■□□□□ 0.28
LINC02028-213ENST00000599735 CCDC87Q9NVE4 849 aa16.81■□□□□ 0.28
LINC02028-213ENST00000599735 KNSTRNQ9Y448 316 aa16.81■□□□□ 0.28
LINC02028-213ENST00000599735 HSPA6P17066 643 aa16.8■□□□□ 0.28
LINC02028-213ENST00000599735 CICQ96RK0 1608 aaPredicted RBP16.8■□□□□ 0.28
LINC02028-213ENST00000599735 PXDNLA1KZ92 1463 aa16.8■□□□□ 0.28
LINC02028-213ENST00000599735 KIF13BQ9NQT8 1826 aa16.8■□□□□ 0.28
LINC02028-213ENST00000599735 C10orf71Q711Q0 1435 aa16.79■□□□□ 0.28
LINC02028-213ENST00000599735 IL13P35225 146 aa16.79■□□□□ 0.28
LINC02028-213ENST00000599735 SULT6B1Q6IMI4 303 aa16.79■□□□□ 0.28
LINC02028-213ENST00000599735 NFATC2IPQ8NCF5 419 aa16.79■□□□□ 0.28
LINC02028-213ENST00000599735 PARP3Q9Y6F1 533 aa16.79■□□□□ 0.28
LINC02028-213ENST00000599735 A0A0G2JLW4 131 aa16.77■□□□□ 0.28
LINC02028-213ENST00000599735 AKAP4Q5JQC9 854 aa16.77■□□□□ 0.28
LINC02028-213ENST00000599735 AEBP1Q8IUX7 1158 aa16.77■□□□□ 0.28
LINC02028-213ENST00000599735 KIF3CO14782 793 aa16.76■□□□□ 0.27
LINC02028-213ENST00000599735 PTCD1O75127 700 aaKnown RBP16.76■□□□□ 0.27
LINC02028-213ENST00000599735 CRKLP46109 303 aaKnown RBP16.76■□□□□ 0.27
LINC02028-213ENST00000599735 AMER1Q5JTC6 1135 aaPredicted RBP16.76■□□□□ 0.27
LINC02028-213ENST00000599735 BCS1LQ9Y276 419 aa16.76■□□□□ 0.27
LINC02028-213ENST00000599735 COL5A3P25940 1745 aaPredicted RBP16.76■□□□□ 0.27
LINC02028-213ENST00000599735 DPEP1P16444 411 aa16.75■□□□□ 0.27
LINC02028-213ENST00000599735 USP42Q9H9J4 1324 aaKnown RBP16.74■□□□□ 0.27
LINC02028-213ENST00000599735 KCNA3P22001 575 aa16.74■□□□□ 0.27
LINC02028-213ENST00000599735 ZNF526Q8TF50 670 aaPredicted RBP16.74■□□□□ 0.27
LINC02028-213ENST00000599735 PIM2Q9P1W9 311 aa16.74■□□□□ 0.27
LINC02028-213ENST00000599735 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
LINC02028-213ENST00000599735 C4AP0C0L4 1744 aa16.73■□□□□ 0.27
LINC02028-213ENST00000599735 MYH14Q7Z406 1995 aaKnown RBP16.73■□□□□ 0.27
LINC02028-213ENST00000599735 FCHSD2O94868 740 aa16.73■□□□□ 0.27
LINC02028-213ENST00000599735 INTS5Q6P9B9 1019 aaKnown RBP16.73■□□□□ 0.27
LINC02028-213ENST00000599735 ARHGAP27Q6ZUM4 889 aa16.73■□□□□ 0.27
LINC02028-213ENST00000599735 SLC52A2Q9HAB3 445 aa16.73■□□□□ 0.27
LINC02028-213ENST00000599735 KIAA1551Q9HCM1 1747 aa16.73■□□□□ 0.27
LINC02028-213ENST00000599735 TOMM70O94826 608 aa16.72■□□□□ 0.27
LINC02028-213ENST00000599735 TM4SF1P30408 202 aa16.72■□□□□ 0.27
LINC02028-213ENST00000599735 FKBP8Q14318 412 aa16.71■□□□□ 0.27
LINC02028-213ENST00000599735 VSIG10Q8N0Z9 540 aa16.71■□□□□ 0.27
LINC02028-213ENST00000599735 PER1O15534 1290 aaPredicted RBP16.7■□□□□ 0.26
LINC02028-213ENST00000599735 IFFO2Q5TF58 517 aa16.7■□□□□ 0.26
LINC02028-213ENST00000599735 CEP350Q5VT06 3117 aa16.7■□□□□ 0.26
LINC02028-213ENST00000599735 RNMTO43148 476 aaKnown RBP16.69■□□□□ 0.26
LINC02028-213ENST00000599735 ZPR1O75312 459 aa16.69■□□□□ 0.26
LINC02028-213ENST00000599735 DDR1Q08345 913 aa16.69■□□□□ 0.26
LINC02028-213ENST00000599735 DALRD3Q5D0E6 543 aaKnown RBP16.69■□□□□ 0.26
LINC02028-213ENST00000599735 CCER1Q8TC90 406 aaPredicted RBP16.69■□□□□ 0.26
LINC02028-213ENST00000599735 SRP68Q9UHB9 627 aaKnown RBP16.69■□□□□ 0.26
LINC02028-213ENST00000599735 POLRMTO00411 1230 aaKnown RBP16.68■□□□□ 0.26
LINC02028-213ENST00000599735 CYP19A1P11511 503 aaPredicted RBP16.68■□□□□ 0.26
LINC02028-213ENST00000599735 APLP1P51693 650 aa16.68■□□□□ 0.26
LINC02028-213ENST00000599735 DNAJC10Q8IXB1 793 aa16.68■□□□□ 0.26
LINC02028-213ENST00000599735 LGR6Q9HBX8 967 aa16.68■□□□□ 0.26
LINC02028-213ENST00000599735 NARFQ9UHQ1 456 aa16.68■□□□□ 0.26
LINC02028-213ENST00000599735 N4BP2Q86UW6 1770 aaPredicted RBP16.68■□□□□ 0.26
LINC02028-213ENST00000599735 SCN11AQ9UI33 1791 aa16.68■□□□□ 0.26
LINC02028-213ENST00000599735 SOS1Q07889 1333 aaPredicted RBP16.68■□□□□ 0.26
LINC02028-213ENST00000599735 DIAPH1O60610 1272 aaKnown RBP16.67■□□□□ 0.26
LINC02028-213ENST00000599735 BRCA1P38398 1863 aaKnown RBP16.67■□□□□ 0.26
LINC02028-213ENST00000599735 KIF7Q2M1P5 1343 aa16.67■□□□□ 0.26
LINC02028-213ENST00000599735 MRC1P22897 1456 aa16.67■□□□□ 0.26
LINC02028-213ENST00000599735 NPC1L1Q9UHC9 1359 aa16.65■□□□□ 0.26
LINC02028-213ENST00000599735 TJP1Q07157 1748 aa16.65■□□□□ 0.26
LINC02028-213ENST00000599735 MTHFSDQ2M296 383 aaKnown RBP16.65■□□□□ 0.26
LINC02028-213ENST00000599735 C9orf131Q5VYM1 1079 aa16.65■□□□□ 0.26
LINC02028-213ENST00000599735 USPL1Q5W0Q7 1092 aa16.65■□□□□ 0.26
LINC02028-213ENST00000599735 RBM46Q8TBY0 533 aaKnown RBP16.65■□□□□ 0.26
LINC02028-213ENST00000599735 ARFGEF1Q9Y6D6 1849 aa16.65■□□□□ 0.26
LINC02028-213ENST00000599735 HMOX1P09601 288 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms