RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, human

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCN8A-208	ENST00000599343	TICAM2	Q86XR7	235 aa		13.8	□□□□□ -0.2
SCN8A-208	ENST00000599343	AFAP1	Q8N556	730 aa		13.8	□□□□□ -0.2
SCN8A-208	ENST00000599343	CPLX3	Q8WVH0	158 aa		13.8	□□□□□ -0.2
SCN8A-208	ENST00000599343	UBA5	Q9GZZ9	404 aa		13.8	□□□□□ -0.2
SCN8A-208	ENST00000599343	TOP1	P11387	765 aa	Known RBP	13.79	□□□□□ -0.2
SCN8A-208	ENST00000599343	ANO10	Q9NW15	660 aa		13.79	□□□□□ -0.2
SCN8A-208	ENST00000599343	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
SCN8A-208	ENST00000599343	CACNA2D4	Q7Z3S7	1137 aa		13.79	□□□□□ -0.2
SCN8A-208	ENST00000599343	KIF18A	Q8NI77	898 aa		13.79	□□□□□ -0.2
SCN8A-208	ENST00000599343	IFFO1	Q0D2I5	559 aa		13.79	□□□□□ -0.2
SCN8A-208	ENST00000599343	NBPF8	Q3BBV2	869 aa		13.79	□□□□□ -0.2
SCN8A-208	ENST00000599343	LUZP1	Q86V48	1076 aa		13.79	□□□□□ -0.2
SCN8A-208	ENST00000599343	MINDY4B	A8MYZ0	360 aa		13.78	□□□□□ -0.2
SCN8A-208	ENST00000599343	FKBP15	Q5T1M5	1219 aa		13.78	□□□□□ -0.2
SCN8A-208	ENST00000599343	RNF187	Q5TA31	235 aa	Predicted RBP	13.78	□□□□□ -0.2
SCN8A-208	ENST00000599343	PODXL2	Q9NZ53	605 aa		13.78	□□□□□ -0.2
SCN8A-208	ENST00000599343	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.78	□□□□□ -0.2
SCN8A-208	ENST00000599343	CKAP2L	Q8IYA6	745 aa		13.78	□□□□□ -0.2
SCN8A-208	ENST00000599343	MX1	P20591	662 aa		13.78	□□□□□ -0.2
SCN8A-208	ENST00000599343	LARP6	Q9BRS8	491 aa	Known RBP	13.78	□□□□□ -0.2
SCN8A-208	ENST00000599343	POTEJ	P0CG39	1038 aa		13.78	□□□□□ -0.2
SCN8A-208	ENST00000599343	SSFA2	P28290	1259 aa		13.78	□□□□□ -0.2
SCN8A-208	ENST00000599343	CCDC82	Q8N4S0	544 aa		13.78	□□□□□ -0.2
SCN8A-208	ENST00000599343	BOLA2	Q9H3K6	86 aa		13.78	□□□□□ -0.2
SCN8A-208	ENST00000599343	PPP1R12B	O60237	982 aa	Predicted RBP	13.77	□□□□□ -0.2
SCN8A-208	ENST00000599343	TNNT1	P13805	278 aa		13.77	□□□□□ -0.2
SCN8A-208	ENST00000599343	METTL24	Q5JXM2	366 aa		13.77	□□□□□ -0.2
SCN8A-208	ENST00000599343	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.77	□□□□□ -0.2
SCN8A-208	ENST00000599343	IGF1R	P08069	1367 aa		13.77	□□□□□ -0.2
SCN8A-208	ENST00000599343	KIF2A	O00139	706 aa	Predicted RBP	13.77	□□□□□ -0.2
SCN8A-208	ENST00000599343	MAP9	Q49MG5	647 aa		13.77	□□□□□ -0.2
SCN8A-208	ENST00000599343	THUMPD2	Q9BTF0	503 aa	Known RBP	13.77	□□□□□ -0.2
SCN8A-208	ENST00000599343	ERBIN	Q96RT1	1412 aa		13.77	□□□□□ -0.2
SCN8A-208	ENST00000599343	IGHMBP2	P38935	993 aa	Known RBP	13.77	□□□□□ -0.21
SCN8A-208	ENST00000599343	ANAPC15	P60006	121 aa		13.77	□□□□□ -0.21
SCN8A-208	ENST00000599343	UBE4A	Q14139	1066 aa		13.77	□□□□□ -0.21
SCN8A-208	ENST00000599343	TSG101	Q99816	390 aa		13.77	□□□□□ -0.21
SCN8A-208	ENST00000599343	USP25	Q9UHP3	1055 aa		13.77	□□□□□ -0.21
SCN8A-208	ENST00000599343	GSTTP1	A0A1W2PQM5	241 aa		13.77	□□□□□ -0.21
SCN8A-208	ENST00000599343	C16orf45	Q96MC5	204 aa	Predicted RBP	13.77	□□□□□ -0.21
SCN8A-208	ENST00000599343	NUP88	Q99567	741 aa	Predicted RBP	13.77	□□□□□ -0.21
SCN8A-208	ENST00000599343	SEC63	Q9UGP8	760 aa	Known RBP	13.77	□□□□□ -0.21
SCN8A-208	ENST00000599343	ANKRD30B	Q9BXX2	1392 aa		13.76	□□□□□ -0.21
SCN8A-208	ENST00000599343	CETN2	P41208	172 aa		13.76	□□□□□ -0.21
SCN8A-208	ENST00000599343	GAPVD1	Q14C86	1478 aa		13.76	□□□□□ -0.21
SCN8A-208	ENST00000599343	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
SCN8A-208	ENST00000599343	CHMP4BP1	P59074	171 aa		13.76	□□□□□ -0.21
SCN8A-208	ENST00000599343	ZNF692	Q9BU19	519 aa	Predicted RBP	13.76	□□□□□ -0.21
SCN8A-208	ENST00000599343	OSCAR	Q8IYS5	282 aa		13.76	□□□□□ -0.21
SCN8A-208	ENST00000599343		U3KPZ7	1027 aa	Predicted RBP	13.76	□□□□□ -0.21
SCN8A-208	ENST00000599343	KIF21B	O75037	1637 aa		13.76	□□□□□ -0.21
SCN8A-208	ENST00000599343	MACROD2	A1Z1Q3	448 aa		13.76	□□□□□ -0.21
SCN8A-208	ENST00000599343	C8orf76	Q96K31	380 aa		13.75	□□□□□ -0.21
SCN8A-208	ENST00000599343	SLFN5	Q08AF3	891 aa		13.75	□□□□□ -0.21
SCN8A-208	ENST00000599343	CGN	Q9P2M7	1197 aa	Known RBP	13.75	□□□□□ -0.21
SCN8A-208	ENST00000599343	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.75	□□□□□ -0.21
SCN8A-208	ENST00000599343	MCM10	Q7L590	875 aa		13.75	□□□□□ -0.21
SCN8A-208	ENST00000599343	KIF1BP	Q96EK5	621 aa		13.75	□□□□□ -0.21
SCN8A-208	ENST00000599343	RAD54L2	Q9Y4B4	1467 aa		13.75	□□□□□ -0.21
SCN8A-208	ENST00000599343	TDRD12	Q587J7	1177 aa	Known RBP	13.75	□□□□□ -0.21
SCN8A-208	ENST00000599343	POLR3D	P05423	398 aa	Predicted RBP	13.74	□□□□□ -0.21
SCN8A-208	ENST00000599343	NF2	P35240	595 aa		13.74	□□□□□ -0.21
SCN8A-208	ENST00000599343	NFE2L2	Q16236	605 aa		13.74	□□□□□ -0.21
SCN8A-208	ENST00000599343	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
SCN8A-208	ENST00000599343	TMPO	P42166	694 aa	Known RBP	13.74	□□□□□ -0.21
SCN8A-208	ENST00000599343	GDPD2	Q9HCC8	539 aa		13.74	□□□□□ -0.21
SCN8A-208	ENST00000599343	DUSP27	Q5VZP5	1158 aa		13.74	□□□□□ -0.21
SCN8A-208	ENST00000599343	BIN1	O00499	593 aa		13.74	□□□□□ -0.21
SCN8A-208	ENST00000599343	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.74	□□□□□ -0.21
SCN8A-208	ENST00000599343	FGD5	Q6ZNL6	1462 aa		13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	GNAT3	A8MTJ3	354 aa		13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	TMC6	Q7Z403	805 aa		13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	MKNK2	Q9HBH9	465 aa		13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	GLRX3	O76003	335 aa	Known RBP	13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	CCT2	P78371	535 aa	Known RBP	13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	C20orf194	Q5TEA3	1177 aa		13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	ZFP91	Q96JP5	570 aa	Predicted RBP	13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	SCLT1	Q96NL6	688 aa		13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	CNNM3	Q8NE01	707 aa		13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	TNPO1	Q92973	898 aa	Known RBP	13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	MYD88	Q99836	296 aa		13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	C11orf95	C9JLR9	678 aa	Predicted RBP	13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	IFIT1	P09914	478 aa	Known RBP	13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	LARP1	Q6PKG0	1096 aa	Known RBP	13.73	□□□□□ -0.21
SCN8A-208	ENST00000599343	SPDYE4	A6NLX3	237 aa		13.72	□□□□□ -0.21
SCN8A-208	ENST00000599343	RAB11FIP3	O75154	756 aa		13.72	□□□□□ -0.21
SCN8A-208	ENST00000599343	MCM3	P25205	808 aa		13.72	□□□□□ -0.21
SCN8A-208	ENST00000599343	NAPB	Q9H115	298 aa		13.72	□□□□□ -0.21
SCN8A-208	ENST00000599343	FCHSD2	O94868	740 aa		13.72	□□□□□ -0.21
SCN8A-208	ENST00000599343	VPS36	Q86VN1	386 aa		13.72	□□□□□ -0.21
SCN8A-208	ENST00000599343	FSIP1	Q8NA03	581 aa		13.72	□□□□□ -0.21
SCN8A-208	ENST00000599343	RANBP6	O60518	1105 aa	Known RBP	13.72	□□□□□ -0.21
SCN8A-208	ENST00000599343	PDIA4	P13667	645 aa	Known RBP	13.72	□□□□□ -0.21
SCN8A-208	ENST00000599343	PAFAH1B1	P43034	410 aa		13.72	□□□□□ -0.21
SCN8A-208	ENST00000599343	SMARCA4	P51532	1647 aa		13.72	□□□□□ -0.21
SCN8A-208	ENST00000599343	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.72	□□□□□ -0.21
SCN8A-208	ENST00000599343	USO1	O60763	962 aa	Known RBP	13.72	□□□□□ -0.21
SCN8A-208	ENST00000599343	MYZAP	P0CAP1	466 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms