RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 ZNF837Q96EG3 531 aaPredicted RBP12.42□□□□□ -0.42
LINC00343-208ENST00000599264 NOD1Q9Y239 953 aa12.42□□□□□ -0.42
LINC00343-208ENST00000599264 A0A1B0GTH6 734 aa12.41□□□□□ -0.42
LINC00343-208ENST00000599264 RNFT1Q5M7Z0 435 aa12.41□□□□□ -0.42
LINC00343-208ENST00000599264 RHBDD1Q8TEB9 315 aa12.41□□□□□ -0.42
LINC00343-208ENST00000599264 TRERF1Q96PN7 1200 aa12.41□□□□□ -0.42
LINC00343-208ENST00000599264 PHKA2P46019 1235 aa12.4□□□□□ -0.42
LINC00343-208ENST00000599264 DBN1Q16643 649 aa12.4□□□□□ -0.42
LINC00343-208ENST00000599264 PPARGC1BQ86YN6 1023 aaKnown RBP12.4□□□□□ -0.42
LINC00343-208ENST00000599264 SCNN1DP51172 638 aa12.39□□□□□ -0.43
LINC00343-208ENST00000599264 POM121CA8CG34 1229 aa12.38□□□□□ -0.43
LINC00343-208ENST00000599264 STAU1O95793 577 aaKnown RBP12.38□□□□□ -0.43
LINC00343-208ENST00000599264 C4orf17Q53FE4 359 aa12.38□□□□□ -0.43
LINC00343-208ENST00000599264 HDGFL1Q5TGJ6 251 aa12.38□□□□□ -0.43
LINC00343-208ENST00000599264 NUCKS1Q9H1E3 243 aaKnown RBP12.38□□□□□ -0.43
LINC00343-208ENST00000599264 CSB-PGBD3P0DP91 1061 aa12.37□□□□□ -0.43
LINC00343-208ENST00000599264 NCOA4Q13772 614 aa12.37□□□□□ -0.43
LINC00343-208ENST00000599264 PROSER2Q86WR7 435 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-208ENST00000599264 PGBD3Q8N328 593 aa12.37□□□□□ -0.43
LINC00343-208ENST00000599264 GTPBP3Q969Y2 492 aaKnown RBP12.37□□□□□ -0.43
LINC00343-208ENST00000599264 USP17L5A8MUK1 530 aa12.36□□□□□ -0.43
LINC00343-208ENST00000599264 SMTNP53814 917 aa12.36□□□□□ -0.43
LINC00343-208ENST00000599264 GTF2IP78347 998 aa12.36□□□□□ -0.43
LINC00343-208ENST00000599264 SRSF11Q05519 484 aaKnown RBP12.36□□□□□ -0.43
LINC00343-208ENST00000599264 PSME1Q06323 249 aa12.36□□□□□ -0.43
LINC00343-208ENST00000599264 BACH1O14867 736 aa12.35□□□□□ -0.43
LINC00343-208ENST00000599264 SLURP2P0DP57 97 aa12.35□□□□□ -0.43
LINC00343-208ENST00000599264 LBRQ14739 615 aaKnown RBP12.35□□□□□ -0.43
LINC00343-208ENST00000599264 TRIM50Q86XT4 487 aa12.35□□□□□ -0.43
LINC00343-208ENST00000599264 CLUAP1Q96AJ1 413 aa12.35□□□□□ -0.43
LINC00343-208ENST00000599264 NIFKQ9BYG3 293 aaKnown RBP12.35□□□□□ -0.43
LINC00343-208ENST00000599264 GPAMQ9HCL2 828 aa12.35□□□□□ -0.43
LINC00343-208ENST00000599264 PCDHGA11Q9Y5H2 935 aa12.35□□□□□ -0.43
LINC00343-208ENST00000599264 SVOPQ8N4V2 548 aa12.34□□□□□ -0.43
LINC00343-208ENST00000599264 MBIPQ9NS73 344 aa12.34□□□□□ -0.43
LINC00343-208ENST00000599264 SERTAD1Q9UHV2 236 aa12.34□□□□□ -0.43
LINC00343-208ENST00000599264 GPR25O00155 361 aa12.33□□□□□ -0.44
LINC00343-208ENST00000599264 ADAMTS2O95450 1211 aa12.33□□□□□ -0.44
LINC00343-208ENST00000599264 EFHC2Q5JST6 749 aa12.33□□□□□ -0.44
LINC00343-208ENST00000599264 TBC1D9Q6ZT07 1266 aa12.33□□□□□ -0.44
LINC00343-208ENST00000599264 SLC4A9Q96Q91 983 aa12.33□□□□□ -0.44
LINC00343-208ENST00000599264 NSFL1CQ9UNZ2 370 aaKnown RBP12.33□□□□□ -0.44
LINC00343-208ENST00000599264 TMEM229AB2RXF0 380 aa12.32□□□□□ -0.44
LINC00343-208ENST00000599264 GAS6Q14393 721 aa12.32□□□□□ -0.44
LINC00343-208ENST00000599264 DEPDC4Q8N2C3 294 aa12.32□□□□□ -0.44
LINC00343-208ENST00000599264 ADAMTS19Q8TE59 1207 aa12.32□□□□□ -0.44
LINC00343-208ENST00000599264 PHF24Q9UPV7 400 aa12.32□□□□□ -0.44
LINC00343-208ENST00000599264 A6NJY4 79 aa12.31□□□□□ -0.44
LINC00343-208ENST00000599264 MSX1P28360 303 aa12.31□□□□□ -0.44
LINC00343-208ENST00000599264 PLA2G4AP47712 749 aa12.31□□□□□ -0.44
LINC00343-208ENST00000599264 ATP1A2P50993 1020 aa12.31□□□□□ -0.44
LINC00343-208ENST00000599264 PLEKHM2Q8IWE5 1019 aa12.31□□□□□ -0.44
LINC00343-208ENST00000599264 A6NJR5 290 aa12.3□□□□□ -0.44
LINC00343-208ENST00000599264 CDK2AP1O14519 115 aa12.3□□□□□ -0.44
LINC00343-208ENST00000599264 ATP9BO43861 1147 aa12.3□□□□□ -0.44
LINC00343-208ENST00000599264 ZNF385CQ66K41 422 aaPredicted RBP12.3□□□□□ -0.44
LINC00343-208ENST00000599264 C1orf216Q8TAB5 229 aa12.3□□□□□ -0.44
LINC00343-208ENST00000599264 CFHR5Q9BXR6 569 aa12.3□□□□□ -0.44
LINC00343-208ENST00000599264 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
LINC00343-208ENST00000599264 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
LINC00343-208ENST00000599264 MAP3K10Q02779 954 aa12.29□□□□□ -0.44
LINC00343-208ENST00000599264 MTFR1Q15390 333 aa12.29□□□□□ -0.44
LINC00343-208ENST00000599264 USP17L2Q6R6M4 530 aa12.29□□□□□ -0.44
LINC00343-208ENST00000599264 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
LINC00343-208ENST00000599264 FNBP4Q8N3X1 1017 aaPredicted RBP12.29□□□□□ -0.44
LINC00343-208ENST00000599264 MX2P20592 715 aa12.28□□□□□ -0.44
LINC00343-208ENST00000599264 NBPF1Q3BBV0 1214 aa12.28□□□□□ -0.44
LINC00343-208ENST00000599264 AIDAQ96BJ3 306 aa12.28□□□□□ -0.44
LINC00343-208ENST00000599264 RUBCNLQ9H714 662 aa12.28□□□□□ -0.44
LINC00343-208ENST00000599264 GLMNQ92990 594 aa12.27□□□□□ -0.45
LINC00343-208ENST00000599264 UCN2Q96RP3 112 aa12.27□□□□□ -0.45
LINC00343-208ENST00000599264 IGF1RP08069 1367 aa12.27□□□□□ -0.45
LINC00343-208ENST00000599264 CRISPLD1Q9H336 500 aa12.26□□□□□ -0.45
LINC00343-208ENST00000599264 ENAMQ9NRM1 1142 aa12.26□□□□□ -0.45
LINC00343-208ENST00000599264 CABP1Q9NZU7 370 aa12.26□□□□□ -0.45
LINC00343-208ENST00000599264 ADAMTS8Q9UP79 889 aa12.26□□□□□ -0.45
LINC00343-208ENST00000599264 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.25□□□□□ -0.45
LINC00343-208ENST00000599264 ZNF358Q9NW07 568 aa12.25□□□□□ -0.45
LINC00343-208ENST00000599264 RBM19Q9Y4C8 960 aaKnown RBP12.25□□□□□ -0.45
LINC00343-208ENST00000599264 TATP17735 454 aaPredicted RBP12.24□□□□□ -0.45
LINC00343-208ENST00000599264 FIGNL1Q6PIW4 674 aa12.24□□□□□ -0.45
LINC00343-208ENST00000599264 WHAMMQ8TF30 809 aa12.24□□□□□ -0.45
LINC00343-208ENST00000599264 CALR3Q96L12 384 aaKnown RBP12.24□□□□□ -0.45
LINC00343-208ENST00000599264 RNF225M0QZC1 329 aaPredicted RBP12.23□□□□□ -0.45
LINC00343-208ENST00000599264 MAP2K3P46734 347 aa12.23□□□□□ -0.45
LINC00343-208ENST00000599264 TPCN2Q8NHX9 752 aa12.23□□□□□ -0.45
LINC00343-208ENST00000599264 DNAAF2Q9NVR5 837 aaKnown RBP12.23□□□□□ -0.45
LINC00343-208ENST00000599264 MKRN1Q9UHC7 482 aaKnown RBP12.23□□□□□ -0.45
LINC00343-208ENST00000599264 IQSEC3Q9UPP2 1182 aaPredicted RBP12.23□□□□□ -0.45
LINC00343-208ENST00000599264 MARSP56192 900 aaKnown RBP12.22□□□□□ -0.45
LINC00343-208ENST00000599264 CCDC102BQ68D86 513 aa12.22□□□□□ -0.45
LINC00343-208ENST00000599264 LYPD4Q6UWN0 246 aa12.22□□□□□ -0.45
LINC00343-208ENST00000599264 LARGE2Q8N3Y3 721 aa12.22□□□□□ -0.45
LINC00343-208ENST00000599264 ZDHHC3Q9NYG2 299 aa12.22□□□□□ -0.45
LINC00343-208ENST00000599264 SCHIP1Q9P0W5 487 aaPredicted RBP12.22□□□□□ -0.45
LINC00343-208ENST00000599264 ATXN7L1Q9ULK2 861 aaPredicted RBP12.22□□□□□ -0.45
LINC00343-208ENST00000599264 PALM3A6NDB9 673 aaPredicted RBP12.21□□□□□ -0.45
LINC00343-208ENST00000599264 ARHGEF15O94989 841 aa12.21□□□□□ -0.45
LINC00343-208ENST00000599264 CELA2BP08218 269 aaPredicted RBP12.21□□□□□ -0.45
LINC00343-208ENST00000599264 ARSJQ5FYB0 599 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms